DY258530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258530 vs. ExPASy Swiss-Prot
Match: JKD_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 3.307e-69 Identity = 127/196 (64.80%), Postives = 142/196 (72.45%), Query Frame = 3 Query: 276 LQMMSGNAFTIPSSLGGFVHQEXXXXXXXXXXXXXXXXX----------------RNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVIKKKVYICPEKTCVHHEPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSQTCGTREYKCDCGTLFFR 815 +QM+ G+ F+I SS+GGFVHQE RN PGTPDPDA+VIALSP TLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR+ ++VIKKKVYICP KTCVHH+ SRALGDLTGIKKH+SRKHG YAVQSDWKAH++TCGTREYKCDCGTLF R Sbjct: 1 MQMIPGDPFSISSSMGGFVHQETHLHHLQQQIPDLNPNSNPNPNAKPNSSSAKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSR 196
BLAST of DY258530 vs. ExPASy Swiss-Prot
Match: MGP_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 7.136e-64 Identity = 110/141 (78.01%), Postives = 123/141 (87.23%), Query Frame = 3 Query: 393 RNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVIKKKVYICPEKTCVHHEPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSQTCGTREYKCDCGTLFFR 815 RNLPG PDP+AEVIALSPKTLMATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+QRT+K+V +K+VY+CPEK+CVHH P+RALGDLTGIKKHF RKHG YAVQSDWKAHS+TCGTREY+CDCGT+F R Sbjct: 44 RNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEV-RKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSR 183
BLAST of DY258530 vs. ExPASy Swiss-Prot
Match: NUC_ARATH (Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.712e-63 Identity = 116/176 (65.91%), Postives = 129/176 (73.30%), Query Frame = 3 Query: 288 SGNAFTIPSSLGGFVHQEXXXXXXXXXXXXXXXXXRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVIKKKVYICPEKTCVHHEPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSQTCGTREYKCDCGTLFFR 815 SG+ F P S H E RNLPG PDP+AEVIALSP TLMATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKL+QRT+K+V +K+VY+CPEKTCVHH SRALGDLTGIKKHF RKHG YAVQSDWKAHS+TCGTREY+CDCGT+F R Sbjct: 11 SGSGFAQPQSSSTLDHDESLINPPLVKKK------RNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEV-RKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSR 179
BLAST of DY258530 vs. ExPASy Swiss-Prot
Match: STOP1_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.488e-13 Identity = 44/148 (29.73%), Postives = 68/148 (45.95%), Query Frame = 3 Query: 411 PDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLR---QRTNKDVIKK------KVYICPEKTC---VHHEPSRALGDLTGIKKHFSRKH-GXXXXXXXXXXXXYAVQSDWKAHSQTCGTREYKCDCGTLFFR 815 P E++ L + ++A + C IC KGF+RD NL++H RGH +K + NK+ + K Y CP C H+ + L + +K H+ R H ++V +D K H + CG ++ C CGT F R Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSR 371
BLAST of DY258530 vs. ExPASy Swiss-Prot
Match: TT1_ARATH (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11 Identity = 39/126 (30.95%), Postives = 57/126 (45.24%), Query Frame = 3 Query: 453 LMATNRFICEICNKGFQRDQNLQLHRRGHNL-----PWKLRQRTNKDVIKKKVYICPE--KTCVHHEPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSQTCGTREYKCDCGTLF 809 L+ F C +C K F R NLQ+H GH P L+ + ++ Y C E + + H S+ L D ++ H+ RKHG AV+ DW+ H + CG R + C CG+ F Sbjct: 139 LIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKR-WVCVCGSDF 263 The following BLAST results are available for this feature:
BLAST of DY258530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258530 ID=DY258530; Name=DY258530; organism=Citrus clementina; type=EST; length=868bpback to top |