DY258820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258820 vs. ExPASy Swiss-Prot
Match: C3H65_ARATH (Zinc finger CCCH domain-containing protein 65 OS=Arabidopsis thaliana GN=EMB1789 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.183e-42 Identity = 98/212 (46.23%), Postives = 122/212 (57.55%), Query Frame = 1 Query: 190 AEKNRQLGVRRLKL-PQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHK-LPPKEQDPPTPSTCTPELKPSPPLYASNLLK-----------PLNNNKV----------SHQNVDALSNHGKVSSFKNIEQSVAKSI--LKPPALAPKGISYLFLGKSS 750 A++ LGV++LKL P KPK +KYC HYLKGRC EGDKCKFSHDT+P TK + CC+FA SCMKGD+CPFDHDLSKYPC NF+ KGFC RGD+CLFSHK P D P+ + K + ++ K P +V SH N N SS K E + L+ P++APKG+S+L L K+S Sbjct: 330 AQERIALGVKKLKLKPVAPKPKPIKYCRHYLKGRCHEGDKCKFSHDTIPETKCSP-CCYFATQSCMKGDDCPFDHDLSKYPCNNFITKGFCYRGDSCLFSHKGTPQSASDTPSANVTVSSTKITAASFSPQKTKKQSVRDAIAKLPAIQARVSSSVAFLKPSSHSN---QRNSSDASSSKINEHVTPPQVPPLRKPSVAPKGMSFLSLDKTS 537
BLAST of DY258820 vs. ExPASy Swiss-Prot
Match: C3H7_ORYSJ (Zinc finger CCCH domain-containing protein 7 OS=Oryza sativa subsp. japonica GN=Os01g0572100 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 4.353e-37 Identity = 83/187 (44.39%), Postives = 109/187 (58.29%), Query Frame = 1 Query: 211 GVRRLKLPQNLKPKTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPSTCTPELKPSPPLYASNLLKPLN-NNKVSHQNVDALSNHGKVSSFKNIEQSVAKSIL-------KPPALAPKGISYLFLGKS 747 GV+RLKL +KPK VK CH YL G+CQ+G+ CKFSHDT PLTKS K C H+AR SC+KGD+CP+DH+LSKYPC NF+ G C RGD C FSH +P E TP+ K S AS++ + N + S Q + + +S S+ K++ K P P+GI +L K+ Sbjct: 417 GVKRLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKS-KPCTHYARGSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAE------GPSTPDAKKS---NASSVPEKANCQEQTSRQKTSTVYSGEPATSVPIKHHSILKNLAGISGNAQKVPVRIPRGIQFLPFNKA 593
BLAST of DY258820 vs. ExPASy Swiss-Prot
Match: ZC3H6_MOUSE (Zinc finger CCCH domain-containing protein 6 OS=Mus musculus GN=Zc3h6 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 2.841e-12 Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 250 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKE 507 K + C ++L+GRC +GD CKF+HD L K + C ++ + C KG+NC + H S++PC+ + + C +GD C FSH KE Sbjct: 271 KGKQICKYFLEGRCIKGDHCKFNHD-AELEKKKEVCKYYLQGYCTKGENCIYMH--SEFPCKFYHSGAKCYQGDKCKFSHDDLTKE 353
BLAST of DY258820 vs. ExPASy Swiss-Prot
Match: ZC3H6_HUMAN (Zinc finger CCCH domain-containing protein 6 OS=Homo sapiens GN=ZC3H6 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.711e-12 Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 250 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKE 507 K + C ++L+GRC +GD+CKF HD L K + C + + C KG+NC + H +++PC+ + + C +GDNC FSH KE Sbjct: 273 KGKQICKYFLEGRCIKGDQCKFDHD-AELEKRKEICKFYLQGYCTKGENCIYMH--NEFPCKFYHSGAKCYQGDNCKFSHDDLTKE 355
BLAST of DY258820 vs. ExPASy Swiss-Prot
Match: ZC3H4_MOUSE (Zinc finger CCCH domain-containing protein 4 OS=Mus musculus GN=Zc3h4 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.842e-11 Identity = 33/89 (37.08%), Postives = 48/89 (53.93%), Query Frame = 1 Query: 265 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPST 531 C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ + G C GD+C+FSH DP T T Sbjct: 395 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYHTTGNCINGDDCMFSH-------DPLTEET 473
BLAST of DY258820 vs. ExPASy Swiss-Prot
Match: ZC3H4_HUMAN (Zinc finger CCCH domain-containing protein 4 OS=Homo sapiens GN=ZC3H4 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 1.842e-11 Identity = 33/89 (37.08%), Postives = 48/89 (53.93%), Query Frame = 1 Query: 265 CHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSHKLPPKEQDPPTPST 531 C ++++GRC GD C FSHD + L K + C + C + +NCP+ H +PC+ + G C GD+C+FSH DP T T Sbjct: 396 CKYFVEGRCTWGDHCNFSHD-IELPKKRELCKFYITGFCARAENCPYMH--GDFPCKLYHTTGNCINGDDCMFSH-------DPLTEET 474
BLAST of DY258820 vs. ExPASy Swiss-Prot
Match: ZC3H8_MOUSE (Zinc finger CCCH domain-containing protein 8 OS=Mus musculus GN=Zc3h8 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 9.139e-11 Identity = 30/80 (37.50%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 250 KTVKYCHHYLKGRCQEGDKCKFSHDTVPLTKSTKACCHFARNSCMKGDNCPFDHDLSKYPCENFVAKGFCNRGDNCLFSH 489 K + C ++L+ +C +GD+CKF HD + K + C ++ + C KG+NC + H S+YPC+ + C +GD+C FSH Sbjct: 206 KGKQVCKYFLERKCIKGDQCKFDHD-AEIEKKKEMCKYYVQGYCTKGENCLYLH--SEYPCKFYHTGTKCYQGDHCNFSH 282 The following BLAST results are available for this feature:
BLAST of DY258820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258820 ID=DY258820; Name=DY258820; organism=Citrus clementina; type=EST; length=1254bpback to top |