DY258908

Overview
NameDY258908
Unique NameDY258908
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1090
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258908 vs. ExPASy Swiss-Prot
Match: Y1222_ARATH (Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana GN=At1g32220 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 6.185e-21
Identity = 47/100 (47.00%), Postives = 70/100 (70.00%), Query Frame = 1 
Query:    1 GFGSNSYMYKINGTANINAVKAAKEQGVKRFVFVSAADFGLVNYLL-RGYYEGKRATEEELMTELPHGGVILRPGFIHGTRQVGSIKLPLSVIGAPLEMV 297
            GFG+   M +ING AN+ AV AAK+ GV +FV ++  D+ L  ++L  GY+ GKR  E EL+++ P  GV+LRPGFI+G R+V  I++PL ++G PL+ +
Sbjct:  136 GFGNEEQMKRINGEANVTAVNAAKDFGVPKFVLITVHDYNLPPFILSNGYFTGKRNAEAELLSKYPTSGVVLRPGFIYGKRKVNGIEVPLDLVGEPLDKI 235
The following BLAST results are available for this feature:
BLAST of DY258908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1222_ARATH6.185e-2147.00Uncharacterized protein At1g32220, chloroplastic O... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAI3DH09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258908 ID=DY258908; Name=DY258908; organism=Citrus clementina; type=EST; length=1090bp
GGTTTCGGCTCAAATTCATATATGTACAAAATTAATGGGACCGCCAACAT
AAACGCTGTAAAAGCTGCTAAAGAGCAAGGTGTAAAAAGGTTTGTGTTTG
TCTCTGCTGCTGACTTTGGTTTGGTAAATTATTTACTACGAGGATATTAT
GAGGGAAAGAGAGCCACTGAAGAAGAGTTAATGACAGAACTGCCACATGG
AGGTGTGATCTTGAGGCCTGGCTTTATACATGGGACTCGTCAGGTTGGAA
GCATCAAGTTACCACTAAGTGTCATTGGGGCTCCATTAGAGATGGTAAAT
TTTGGCATCTATATCTATCCTCAACAGATTCTTATCTTTACCCAGCAGTT
CACTGAGTTTTGTGTCTCTGTTTCTAGAGAGCAGAACCTATGGGTGGTAA
AAGCACACATGGAAATAGATAGTCATTGTTGATGCCTTCCATCTATTTGC
TGTTTCTTAAAACTCACTGATGTTCGCTCATCCATGGACCATTGAAATTA
TAGAACCAAGGAAATTTCCTAGCTGTCTGAATGTCTGATCTAGGGAACAC
AGGATAAAATGTGATGTATCAACAAACAATCCTTTTAAATGTTTTCTCGG
TATATCTTTCTTATTCTTTTTGCAATGTTGCATATTGTCCATACACTCTG
AAAATAGTTCAATCAGAACGACTCTGTTATGTTGGTAACGACAGATTTCA
TACGGGTCTGGCAGAGGGCTATGTTATTCAATTTTTATTTCTCCCTTTTC
TTCAATTAAATTCATGTTTAATGCAGATACTGAAACATGCAAAAGTGCTG
ACGGCAATTCCCTCTTGTTGGTCCGCTGTTAATACCTCCAGTACATGTGA
CTTCAGTGGCAAAGGTTGCTGTGAATGCTGCAACAGATCCAACATTCCCC
CACCGCCATCATTGATGTATACCGTATACCACGGCATAGCCCAACAAAAG
TCCGCATAAACATATGTTTGATTTTTTCCCCCTTTTGTCCATTTAATTTT
TTCTCCCATTACATGGGGGCATGGAAGCCCAACTTAATTTTTCTTTTAAA
AAAAAAATTAAATCCCTTTAAAAATTGAGGTTTAAGGGCC
back to top