DY259780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259780 vs. ExPASy Swiss-Prot
Match: FB84_ARATH (F-box protein At1g70590 OS=Arabidopsis thaliana GN=At1g70590 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 2.228e-77 Identity = 159/280 (56.79%), Postives = 194/280 (69.29%), Query Frame = 3 Query: 117 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTXXXXXXXXXXXXXFSCSRSIKS----TEGHDFASLPFDFLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYPLALCLHRGRGVDFNPQEAARWYLRAAEGGYVRAM*QPLPFPIPLGKGLPLNSRQSQEKGEKEQLDWG 941 MKQRTWP RS GSRF++L F ++R ++ S S S S E DF+ LP+D L KIAA F+ P L+AASLVCKSW DAL+PLRE+M+L+RWGK++KHGRG VR NLDKALDSFLKGA RGSTLAMVDAGL+YWE +KE A++LYR+A+ LGD GQ NLGI+YLQ QP+N +EA+K L Q++ G+VRAQY LALCLH GR V N EA +WYL+AAEGGYVRAM + +G+GLP N R+ K K D G Sbjct: 1 MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSNEFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRGGVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNLGIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEATKWYLKAAEGGYVRAM-YNISLCYSVGEGLPQN-RKLARKWMKRAADHG 278
BLAST of DY259780 vs. ExPASy Swiss-Prot
Match: SE1L1_RAT (Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Sel1l PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 6.182e-11 Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 456 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYPLALCLHRGRGVDFNPQEAARWYLRAAEGGYVRA 839 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K +A+ G V Q L + G GV + ++A +++ A++GG++ A Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILA 521
BLAST of DY259780 vs. ExPASy Swiss-Prot
Match: SE1L1_MOUSE (Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 6.182e-11 Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 456 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYPLALCLHRGRGVDFNPQEAARWYLRAAEGGYVRA 839 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K +A+ G V Q L + G GV + ++A +++ A++GG++ A Sbjct: 383 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILA 517
BLAST of DY259780 vs. ExPASy Swiss-Prot
Match: SE1L1_MESAU (Protein sel-1 homolog 1 OS=Mesocricetus auratus GN=Sel1l PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.182e-11 Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 456 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYPLALCLHRGRGVDFNPQEAARWYLRAAEGGYVRA 839 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K +A+ G V Q L + G GV + ++A +++ A++GG++ A Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILA 521
BLAST of DY259780 vs. ExPASy Swiss-Prot
Match: SE1L1_HUMAN (Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 6.182e-11 Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 456 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYPLALCLHRGRGVDFNPQEAARWYLRAAEGGYVRA 839 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K +A+ G V Q L + G GV + ++A +++ A++GG++ A Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILA 521 The following BLAST results are available for this feature:
BLAST of DY259780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259780 ID=DY259780; Name=DY259780; organism=Citrus clementina; type=EST; length=950bpback to top |