DY260053
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260053 vs. ExPASy Swiss-Prot
Match: PHG1A_DICDI (Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 1.452e-65 Identity = 124/246 (50.41%), Postives = 164/246 (66.67%), Query Frame = 1 Query: 16 AQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPSN*GGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIP*AGLVYEPHLLNSPWRDTSIWSRFP*TFLIPTSIWLNQFHYIXXXXXXXXXXPHVPCAQNTLVPCYFPLCMEDHH 753 +QEETGWK++HGDVFRPP++ LL V +G+GVQ F M L+TMIFA+LGFLSP+N GGL TA+++L+V +FAGY S R++ +FKG WK+ TA++ PGI+ IFF +N + G KSS AVPFGT ++I +WFGISVPLV++GS+ KKP EDPV+TN+IPRQ+P P+L + F I TS+W NQF+YI V A+ ++V CYF LC EDHH Sbjct: 321 SQEETGWKMIHGDVFRPPSHPMLLSVCIGSGVQIFSMTLITMIFAVLGFLSPANIGGLATALIVLFVLSAMFAGYFSTRVFTIFKGRNWKKNTIYTALSMPGIIFGIFFFVNMFLRGAKSSAAVPFGTFASIIAMWFGISVPLVFLGSYFASKKPVPEDPVRTNQIPRQVPDQIWYMNPYLSILMGGILPFGAVFIELHFILTSLWDNQFYYIFGFLFIVLMILIVTSAEISIVMCYFQLCAEDHH 566
BLAST of DY260053 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 6.314e-61 Identity = 119/250 (47.60%), Postives = 157/250 (62.80%), Query Frame = 1 Query: 4 TQDVAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPSN*GGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIP*AGLVYEPHLLNSPWRDTSIWSRFP*TFLIPTSIWLNQFHYIXXXXXXXXXXPHVPCAQNTLVPCYFPLCMEDHH 753 T+D AQEE GWKLVHGD+FRPP LL V++G+G Q M VT+ FA LGFLSP+N G LMT ++LWV +G AGY +AR YK F G +WK T+ PGIV A FF++N ++WG+ SS A+PFGT+ A++ LWF ISVPL ++G++ GFKK AIE PV+TN+IPRQIP +P F F I SIW +Q +Y+ + C++ T++ CYF LC ED+H Sbjct: 339 TED-AQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGEKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYH 587
BLAST of DY260053 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 6.314e-61 Identity = 119/250 (47.60%), Postives = 157/250 (62.80%), Query Frame = 1 Query: 4 TQDVAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPSN*GGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIP*AGLVYEPHLLNSPWRDTSIWSRFP*TFLIPTSIWLNQFHYIXXXXXXXXXXPHVPCAQNTLVPCYFPLCMEDHH 753 T+D AQEE GWKLVHGD+FRPP LL V++G+G Q M VT+ FA LGFLSP+N G LMT ++LWV +G AGY +AR YK F G +WK T+ PGIV A FF++N ++WG+ SS A+PFGT+ A++ LWF ISVPL ++G++ GFKK AIE PV+TN+IPRQIP +P F F I SIW +Q +Y+ + C++ T++ CYF LC ED+H Sbjct: 339 TED-AQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGEKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYH 587
BLAST of DY260053 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 6.314e-61 Identity = 119/250 (47.60%), Postives = 157/250 (62.80%), Query Frame = 1 Query: 4 TQDVAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPSN*GGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIP*AGLVYEPHLLNSPWRDTSIWSRFP*TFLIPTSIWLNQFHYIXXXXXXXXXXPHVPCAQNTLVPCYFPLCMEDHH 753 T+D AQEE GWKLVHGD+FRPP LL V++G+G Q M VT+ FA LGFLSP+N G LMT ++LWV +G AGY +AR YK F G +WK T+ PGIV A FF++N ++WG+ SS A+PFGT+ A++ LWF ISVPL ++G++ GFKK AIE PV+TN+IPRQIP +P F F I SIW +Q +Y+ + C++ T++ CYF LC ED+H Sbjct: 338 TED-AQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGEKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYH 586
BLAST of DY260053 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 6.314e-61 Identity = 119/250 (47.60%), Postives = 157/250 (62.80%), Query Frame = 1 Query: 4 TQDVAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPSN*GGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIP*AGLVYEPHLLNSPWRDTSIWSRFP*TFLIPTSIWLNQFHYIXXXXXXXXXXPHVPCAQNTLVPCYFPLCMEDHH 753 T+D AQEE GWKLVHGD+FRPP LL V++G+G Q M VT+ FA LGFLSP+N G LMT ++LWV +G AGY +AR YK F G +WK T+ PGIV A FF++N ++WG+ SS A+PFGT+ A++ LWF ISVPL ++G++ GFKK AIE PV+TN+IPRQIP +P F F I SIW +Q +Y+ + C++ T++ CYF LC ED+H Sbjct: 339 TED-AQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGEKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYH 587
BLAST of DY260053 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 6.534e-58 Identity = 114/243 (46.91%), Postives = 155/243 (63.79%), Query Frame = 1 Query: 22 EETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPSN*GGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIP*AGLVYEPHLLNSPWRDTSIWSRFP*TFLIPTSIWLNQFHYIXXXXXXXXXXPHVPCAQNTLVPCYFPLCMEDH 750 EE+GWKLVHGDVFRPP +L +G+G+Q F M+L+ + A+LG LSPS+ G LMT L++FMG+F G+++ RLY+ KG WK+ AF TA +PG+V I FVLN IWG+ SSGAVPF TM AL+ +WFGIS+PLVY+G + GF+K ++PV+TN+IPRQIP + + F F I ++IW NQF+Y+ V C+Q ++V YF LC ED+ Sbjct: 324 EESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDY 566
BLAST of DY260053 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 6.534e-58 Identity = 114/243 (46.91%), Postives = 155/243 (63.79%), Query Frame = 1 Query: 22 EETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPSN*GGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIP*AGLVYEPHLLNSPWRDTSIWSRFP*TFLIPTSIWLNQFHYIXXXXXXXXXXPHVPCAQNTLVPCYFPLCMEDH 750 EE+GWKLVHGDVFRPP +L +G+G+Q F M+L+ + A+LG LSPS+ G LMT L++FMG+F G+++ RLY+ KG WK+ AF TA +PG+V I FVLN IWG+ SSGAVPF TM AL+ +WFGIS+PLVY+G + GF+K ++PV+TN+IPRQIP + + F F I ++IW NQF+Y+ V C+Q ++V YF LC ED+ Sbjct: 323 EESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDY 565
BLAST of DY260053 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 6.534e-58 Identity = 114/243 (46.91%), Postives = 155/243 (63.79%), Query Frame = 1 Query: 22 EETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPSN*GGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIP*AGLVYEPHLLNSPWRDTSIWSRFP*TFLIPTSIWLNQFHYIXXXXXXXXXXPHVPCAQNTLVPCYFPLCMEDH 750 EE+GWKLVHGDVFRPP +L +G+G+Q F M+L+ + A+LG LSPS+ G LMT L++FMG+F G+++ RLY+ KG WK+ AF TA +PG+V I FVLN IWG+ SSGAVPF TM AL+ +WFGIS+PLVY+G + GF+K ++PV+TN+IPRQIP + + F F I ++IW NQF+Y+ V C+Q ++V YF LC ED+ Sbjct: 324 EESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDY 566
BLAST of DY260053 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 6.534e-58 Identity = 114/243 (46.91%), Postives = 155/243 (63.79%), Query Frame = 1 Query: 22 EETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPSN*GGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIP*AGLVYEPHLLNSPWRDTSIWSRFP*TFLIPTSIWLNQFHYIXXXXXXXXXXPHVPCAQNTLVPCYFPLCMEDH 750 EE+GWKLVHGDVFRPP +L +G+G+Q F M+L+ + A+LG LSPS+ G LMT L++FMG+F G+++ RLY+ KG WK+ AF TA +PG+V I FVLN IWG+ SSGAVPF TM AL+ +WFGIS+PLVY+G + GF+K ++PV+TN+IPRQIP + + F F I ++IW NQF+Y+ V C+Q ++V YF LC ED+ Sbjct: 323 EESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDY 565
BLAST of DY260053 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 6.534e-58 Identity = 114/243 (46.91%), Postives = 155/243 (63.79%), Query Frame = 1 Query: 22 EETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPSN*GGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIP*AGLVYEPHLLNSPWRDTSIWSRFP*TFLIPTSIWLNQFHYIXXXXXXXXXXPHVPCAQNTLVPCYFPLCMEDH 750 EE+GWKLVHGDVFRPP +L +G+G+Q F M+L+ + A+LG LSPS+ G LMT L++FMG+F G+++ RLY+ KG WK+ AF TA +PG+V I FVLN IWG+ SSGAVPF TM AL+ +WFGIS+PLVY+G + GF+K ++PV+TN+IPRQIP + + F F I ++IW NQF+Y+ V C+Q ++V YF LC ED+ Sbjct: 323 EESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDY 565 The following BLAST results are available for this feature:
BLAST of DY260053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260053 ID=DY260053; Name=DY260053; organism=Citrus clementina; type=EST; length=1115bpback to top |