DY260164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260164 vs. ExPASy Swiss-Prot
Match: PUB22_ARATH (U-box domain-containing protein 22 OS=Arabidopsis thaliana GN=PUB22 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.836e-60 Identity = 134/245 (54.69%), Postives = 163/245 (66.53%), Query Frame = 3 Query: 135 EEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLRSIAAENETNKRCLESARAVEFLASFVTNSNAMEESPEG---------------FDNLHESSRP-VHEALSLPCNP*ISELG*K-ILVGAEWEPLGIPLPKSWPRETSNSPAKAALFLKSRPEITQP 818 +EI++P+FFLCPISL IMKDPV V TGITYDRESIEKWLF+GK N+CP+TKQV++ E +LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPI K++I KL+ E++ S Q+KCLK+LR I +EN TNKRCLE+A EFLA+ V+NS SP +N +SSR + EALS+ + SE K +L + L L K R S A AAL LK E+ P Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVIT-ETDLTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLLEVADP 246
BLAST of DY260164 vs. ExPASy Swiss-Prot
Match: PUB23_ARATH (U-box domain-containing protein 23 OS=Arabidopsis thaliana GN=PUB23 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.455e-57 Identity = 125/247 (50.61%), Postives = 164/247 (66.40%), Query Frame = 3 Query: 135 EEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLRSIAAENETNKRCLESARAVEFLASFVTNSNAMEESPEGFDNLHESSRPVHEALSLPCNP*ISELG*KILVGAEWE-PLGIPLPKSWPRETSNSPAKAALFLKSRPEITQPQATPKPRGPKLFVPIVPV 872 EEI++P FFLCPISL IMKDPV V TGITYDR+SIEKWLFAGK N+CP+TKQ ++ + +LTPNHTLRRLIQSWCTLNASYG+ERIPTP+PPI K++I KL+ ++A S + Q+KCLK+LR I +EN TNKRCLE+A EFLA+ V+N + E+ EAL+L + SE K L+ + + + L K R S A L LK+ E+ P + + P++F +V + Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDIT-DADLTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDS-------------ENGSLTDEALNLLYHLETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLK-PEVFTEVVQI 239
BLAST of DY260164 vs. ExPASy Swiss-Prot
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.161e-30 Identity = 73/162 (45.06%), Postives = 98/162 (60.49%), Query Frame = 3 Query: 141 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAK------SPQMQIKCLKKLRSIAAENETNKRCLESARAVEFLA----SFVTNSNAMEES 596 I +P F CPISL +M+DPVTV TG TYDR SIE W+ G N TCP+T+ L S+ L PNHTLRRLIQ WC N S G+ERIPTPK P + + LL++A+ S + + L++LR A +++ N+ + + A E L S T+S + ES Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPL-SDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSES 172
BLAST of DY260164 vs. ExPASy Swiss-Prot
Match: PUB26_ARATH (U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.854e-28 Identity = 66/145 (45.52%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 141 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAK------SPQMQIKCLKKLRSIAAENETNKRCLESARAVEFL 557 I +P F CPISL +M DPVT+ TG TYDR SI+ W+ G N TCP+T+ LS + L PNHTLRRLIQ WC N S G+ERIPTPK P + + LL++A+ S + + +++LR +A ++E N+ + A E L Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMG-NTTCPVTRVALS-DFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRLRGLARDSEKNRVLIAGHNAREIL 154
BLAST of DY260164 vs. ExPASy Swiss-Prot
Match: PUB24_ARATH (U-box domain-containing protein 24 OS=Arabidopsis thaliana GN=PUB24 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.421e-28 Identity = 72/184 (39.13%), Postives = 103/184 (55.98%), Query Frame = 3 Query: 123 NQLMEEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQI---KCLKKLRSIAAENETNKRCLESARAVEFLASFVTNSNAMEESPEGFDNLHESSRPVHEALSLPCN 665 +Q EEI++P +F+CPISL IMKDPVT +GITYDR++I KWL K +CP+TKQ L + +LTPNH LRRLIQ WC N + G+ RI TP+ P K + + + K Q + + L+KL +A + + E + V ++ E+ L ES R +H + +P N Sbjct: 2 DQEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL--EKVPSCPVTKQPLPLDSDLTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREETLQKLEVLAMDGNNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLH-LIGIPSN 182
BLAST of DY260164 vs. ExPASy Swiss-Prot
Match: PUB20_ARATH (U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.735e-26 Identity = 64/158 (40.51%), Postives = 97/158 (61.39%), Query Frame = 3 Query: 138 EIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQ-----IKCLKKLRSIAAENETNKRCLESARAVEFLA----SFVTNSNA 584 EI +P+ F CPIS +MKDPV + +GITYDRE+IEKW +G TCP+T VL+S E PNHT+RR+IQ WC + GIERIPTP+ P+ Q++++ + + + ++ + K+ + E+E N++C++ A L +F N+NA Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESG-YQTCPVTNTVLTS-LEQIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANA 185
BLAST of DY260164 vs. ExPASy Swiss-Prot
Match: PUB21_ARATH (U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.243e-24 Identity = 59/137 (43.07%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 138 EIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKA---QITKLLNEAAKSPQMQIKC---LKKLRSIAAENETNKRCL 530 EI +P F CPIS+ +MKDPV + TGITYDR SIE W+ +G N TCP+T VL++ ++ PNHT+R++IQ WC S I+RIPTP+ P+ +I++ L+ A + + KC ++K++ + E+E N++C+ Sbjct: 28 EITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSG-NKTCPVTNTVLTTFDQI-PNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYE-KCGVIIEKIKKLGDESEKNRKCV 161
BLAST of DY260164 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.866e-21 Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 141 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPI------NKAQITKLLNE-AAKSPQMQIKCLKKLRSIAAENETNKRCLESARAVEFLASFVTNSN 581 I +P F CPISL +MKDPV V TG TY+R IEKW+ +G ++TCP T+Q +S+ LTPN+ LR LI WC N +R P P +A I LL++ + + Q +LR +A N N+ C+ A A+ L S +++S+ Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASG-HHTCPTTQQKMSTSA-LTPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSD 422
BLAST of DY260164 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.866e-21 Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 141 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPI------NKAQITKLLNE-AAKSPQMQIKCLKKLRSIAAENETNKRCLESARAVEFLASFVTNSN 581 I +P F CPISL +MKDPV V TG TY+R IEKW+ +G ++TCP T+Q +S+ LTPN+ LR LI WC N +R P P +A I LL++ + + Q +LR +A N N+ C+ A A+ L S +++S+ Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASG-HHTCPTTQQKMSTSA-LTPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSD 422
BLAST of DY260164 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 1.019e-18 Identity = 56/144 (38.89%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 147 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQM--QIKCLKKLRSIAAENETNKRCLESARAVEFLASFVT 572 +P FLCPI+L IM DPV + TG TY++ESI+KW AG + TCP T+Q L L PN L+ LI WC N E+ +P + LL EA S Q+ Q + +K++R +A EN N+ + +A A+ L ++ Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAG-HKTCPKTRQEL-DHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLS 431 The following BLAST results are available for this feature:
BLAST of DY260164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260164 ID=DY260164; Name=DY260164; organism=Citrus clementina; type=EST; length=1123bpback to top |