DY260342

Overview
NameDY260342
Unique NameDY260342
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1291
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7777 contig Ccv1_Contig7777:1061..2350. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY260342 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.849e-23
Identity = 60/135 (44.44%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:   10 QLFPLDVVQLSSDSERGTRLRFSMYD-KTSIINEDVDLNVRFST--ETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVG--VSNDHARRLALTN 399
            Q  P  VVQ  SD + GT + FS  D K  ++    D+N+ F    +  C+  TVWR+D+YD S GKW++TT GV+G PG  TL +WFK E+ G     YK   CPSVC+SC +LC+D+G    +D   RLAL++
Sbjct:   67 QSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAG--VLGYKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSD 199
[Close]
BLAST of DY260342 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 3.483e-21
Identity = 56/132 (42.42%), Postives = 75/132 (56.82%), Query Frame = 1 
Query:   19 PLDVVQLSSDSERGTRLRFSMYD-KTSIINEDVDLNVRFSTETRCN--EPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVGVSNDH--ARRLALTN 399
            P  VVQ   + +    L F   + K  ++    DLN+ FS    C     TVWR+D YD S G++F+T GGV+GNPG +T+ +WFK E   G    YK+V CP+VC SC   C DVG+  D    RRLAL++
Sbjct:   77 PPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGS-GFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207
[Close]
BLAST of DY260342 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.956e-12
Identity = 51/137 (37.23%), Postives = 72/137 (52.55%), Query Frame = 1 
Query:    1 GRNQLFPLDVVQLSSDSERGTRLRFSMYD--KTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVGVSND--HARRLALTN 399
            G  +  PL VVQ   D+  G  + FS     K +I+ E VDLNV+F+    CNE T W+VD + P    W +T GG +G  G ++  + FK ++  G   +YK   CPS   + +  CN+V +  D    RRL LTN
Sbjct:   40 GNKKKCPLSVVQDPFDN--GEPIIFSAIKNVKDNIVFESVDLNVKFNITINCNETTAWKVDRF-PGVIGWTVTLGGEKGYHGFESTHSMFKIKK-AGLPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTN 172
The following BLAST results are available for this feature:
BLAST of DY260342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC2.849e-2344.4421 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU3.483e-2142.42Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA2.956e-1237.23Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP12YD07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260342 ID=DY260342; Name=DY260342; organism=Citrus clementina; type=EST; length=1291bp
GGCAGAAACCAACTCTTCCCACTTGATGTTGTCCAACTAAGTTCCGACTC
AGAAAGAGGAACCCGTTTAAGATTCTCAATGTATGATAAAACTAGTATTA
TCAATGAAGATGTGGATCTGAACGTGAGATTCTCGACAGAGACTCGCTGC
AACGAACCAACAGTATGGAGAGTCGACAGCTATGATCCATCGAGAGGAAA
ATGGTTTATAACAACTGGTGGTGTTGAAGGAAACCCTGGAGCTCAAACTT
TGAAAAACTGGTTTAAGTTTGAGAGAATTGGAGGAGATCGAGCTACGTAC
AAGATTGTTCACTGTCCTTCCGTTTGCGAATCCTGTGTATCTTTATGCAA
TGATGTTGGGGTTTCTAACGATCATGCTCGACGTTTGGCTCTCACTAACG
GGCGCGCGCTTGCTGTTGTTCTAGTCCCTGGTAATGAGAGATCACCCCCA
TGTGCGTCTTGAATGCCCTTGTATCCATTACTCTAAATAATGGATCGGGC
TAGCTCCCTGACGCTTATAACATAAACAAAAATGTCTTTGCTAGCTAGTC
TGTGTCCCTTTGGAACATATCAAAGTGGACAACTTTGAATGTTAAAACAC
ACCCAGAAAAAACACCCACCCTTCCCGCCACCCAGTGGCCTCACCCGACC
ACTCTGACTCACCTCTTTATGCCCCGCACACGCCCCCTCCCCTTCACTTC
CTCATCTTCACCCCCCCCCCCCCCCCAACCTCCCCCCACACCCACCCCTC
TTTCTAGTCTCTTCTCGCTTTAGGTGTCCCCCGCATCCAGTCCTTCTTCG
CCTCTGACCCCACCTTATCTTCACATAAGACAGTTGCACTTGATCGCTTC
TCACTCCCCCGTCTTCTATCGCTCGCGAGTTCTTCCTGCAAACCCACTTC
CCGCCGCTAGCCTCTACTCACTGCCTAAGCGCCCACACGCCCTCCACACC
TGGTCACGCCCCGCACCCGCCCACCCCACCCTCGCGCACACTCAACTACT
ATCCCACCCCTTCCACTACACTTACCCCACTAAGACTCACTCTACTGCTT
TCCCCTTTATACCCGCCCCCTCATGCTTGTACTCACCCTACTTCCCACAA
CCTCCTCCATGCGCTCTTTAACCACACCTCGTCCATCTCACCTGCATGCT
CCGCATGGTACTCCTTACTGCTTTCGTGCCTCCTTGCCCTCTAGACTCTC
GATTACAGGCTGATCTCCACATGCTCATTCTCCCGCACTAACCAGGCCCA
CTCCTCCACGTCGACCACCCCCGCACGCCTTCCTAAACACA
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