DY260473
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260473 vs. ExPASy Swiss-Prot
Match: SPA3_ARATH (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.333e-53 Identity = 119/236 (50.42%), Postives = 162/236 (68.64%), Query Frame = 1 Query: 1 VSFICSDIEEVSKQQAILRKKGGLGSFAELANDD---LSGLNIPSLNIIDNDCSATMGSRKRFRPE-LQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKP--SGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 684 VS + SDIE+V K+Q IL+K+G S ++ + DD SG + S + + SA + SRKR R L L + E D+ ++ +L +SSRLM+NFKKLES YFLTR R +K SG+ L RHS LSS+ +V+E+SS++N + + + ++ R+ GWI+PFLEGLC+YLSFS+LRVKADL QGDLLNSS+LVC+L+FDR+GELFA AGVNKKIK+FEC++I Sbjct: 345 VSLLSSDIEQVVKRQLILKKRGS--SLSDFSKDDHQYTSGQPLMSFQA-NEEPSAFLASRKRVRQGILALENGVEVDEE-----------SQGSTLLESSRLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRGSMIVSEKSSVSNPVAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNSSNLVCALAFDREGELFATAGVNKKIKIFECNSI 566 HSP 2 Score: 30.4166 bits (67), Expect = 2.333e-53 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 723 EMARRSKQTSIWWNHYIQKPKLAPSNF 803 E+A RSK +S+ WN YI K ++A SNF Sbjct: 579 ELAGRSKLSSLCWNSYI-KSQIASSNF 604
BLAST of DY260473 vs. ExPASy Swiss-Prot
Match: SPA4_ARATH (Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.237e-49 Identity = 110/234 (47.01%), Postives = 149/234 (63.68%), Query Frame = 1 Query: 1 VSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG---RPLVRH-SQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFECDAIHK 690 +S + SDI++V K+Q +L++KG D + + SRKR R + EE +D+ +++ L E +L +SSRLM+N KKLES YF TR R +K + +PL R+ S LS +GR+S E+SS++ SK+ ++ R+ GWI+PFLEGLCKYLSFSKLRVKADL QGDLLNSS+LVC++ FDRDGE FA AGVNKKIK+FEC++I K Sbjct: 316 ISLLSSDIDQVVKRQLVLQQKG-------------------------RDVRSFLASRKRIRQGAETTAAEEENDDNSIDEESKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAATAAEKPLARYYSALSCNGRSS-----EKSSMSQ-PSKDPINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIK 518 HSP 2 Score: 29.6462 bits (65), Expect = 4.237e-49 Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 723 EMARRSKQTSIWWNHYIQKPKLAPSNF 803 E+A RSK + I WN YI K ++A SNF Sbjct: 529 ELASRSKLSGICWNSYI-KSQVASSNF 554
BLAST of DY260473 vs. ExPASy Swiss-Prot
Match: SPA1_ARATH (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.039e-18 Identity = 52/134 (38.81%), Postives = 79/134 (58.96%), Query Frame = 1 Query: 283 SSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN-ERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFECDA 681 + RLM N ++LE AYF R + + S ++ R+ K L + +R S N +++ ++G+ S + F EGLCK+ +SK + GDLLNS+ +VCSLSFD D E AAAG++KKIK+F+ +A Sbjct: 623 TDRLMSNIRQLEDAYFFMRSQ---------INLSSSAATARSDKTLKDRDRCSENQNENQDMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISKKIKIFDFNA 747 HSP 2 Score: 23.0978 bits (48), Expect = 1.039e-18 Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 3 Query: 723 EMARRSKQTSIWWNHYIQ 776 EM +SK + + WN YI+ Sbjct: 761 EMVNKSKLSCVCWNSYIK 778
BLAST of DY260473 vs. ExPASy Swiss-Prot
Match: SPA2_ARATH (Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.321e-17 Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 289 RLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 684 RL++N +LESAYF R P R +R + L N +++ + + E +S R G F +GLCKY +SK + L +L N+S+++CSL FDRD + FA AGV+KKIK++E +++ Sbjct: 635 RLIRNINQLESAYFAARIDAHLPEARYRLRPDR--------DLLRNSDNTVAEVENSETWSSDDRVG---AFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSL 755 HSP 2 Score: 25.409 bits (54), Expect = 5.321e-17 Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 723 EMARRSKQTSIWWNHYIQKPKLAPSNF 803 EM RSK + + WN+YI+ LA S++ Sbjct: 768 EMPNRSKLSGVCWNNYIRN-YLASSDY 793
BLAST of DY260473 vs. ExPASy Swiss-Prot
Match: COP1_PEA (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.071e-12 Identity = 63/224 (28.12%), Postives = 105/224 (46.88%), Query Frame = 1 Query: 25 EEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLH-HLEECDDNL--DDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPV-KPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 684 + S + +L GG S + + SGL LN+ S + + + ++ H H + D + D+Q N +G +L + R+ F L+ Y R + KP G+ ER + N S+EGYS G ++ F L + +S+LRV A++ GD+ +S+++V S+ FDRD +LFA AGV+++IKVF+ A+ Sbjct: 206 DRYSVKLRMLDDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSGSHTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSG---LALVRKKRVHTQFNDLQECYLQKRRQAADKPHGQ-------------------QERDT--NFISREGYSCG-----LDDFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAV 400 HSP 2 Score: 22.7126 bits (47), Expect = 9.071e-12 Identity = 11/27 (40.74%), Postives = 17/27 (62.96%), Query Frame = 3 Query: 723 EMARRSKQTSIWWNHYIQKPKLAPSNF 803 EM RSK + + WN Y K ++A S++ Sbjct: 413 EMTTRSKLSCLSWNKY-AKNQIASSDY 438
BLAST of DY260473 vs. ExPASy Swiss-Prot
Match: COP1_ARATH (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 9.354e-11 Identity = 47/150 (31.33%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 238 QKHNLTGNEERSLFKSSRLMKNFKKLESAYF-LTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 684 +K L+G++ +SL +S+ M K++ + + L C L + QL+ + + N++S + +EGYS G + F L + +S+LRV A++ GD+ +S+++V S+ FDRD ELFA AGV++ IKVF+ ++ Sbjct: 273 KKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECY--------LQKRRQLADQPNSKQE--NDKSVVR----REGYSNG-----LADFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSV 403 The following BLAST results are available for this feature:
BLAST of DY260473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260473 ID=DY260473; Name=DY260473; organism=Citrus clementina; type=EST; length=1277bpback to top |