DY260760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SC24B_ARATH (Protein transport protein Sec24-like At4g32640 OS=Arabidopsis thaliana GN=At4g32640 PE=1 SV=2) HSP 1 Score: 292.738 bits (748), Expect = 2.117e-78 Identity = 140/199 (70.35%), Postives = 164/199 (82.41%), Query Frame = 1 Query: 7 GPVRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLPEGPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDVEDVYTPLQSDIIVPGFRVPVNNLKIMLENISSTAQNHKLPRQPSGSLIQS 603 GPVRCSRCK YINPFMKFIDQGR+FIC+ CG+TDETPRDYHCNL ELCRGTVEFVATKEYMVRDPMPAV+FFLIDVSMNA+QTGATAAAC+AI QV+SDLPEGPRT VGIATFDSTIHFYNLKRALQQPLMLIVPDV+DVYTPL++D++V +L+++L++I + Q K+P G+ +++ Sbjct: 426 GPVRCSRCKGYINPFMKFIDQGRKFICNFCGYTDETPRDYHCNLGPDGRRRDVDERPELCRGTVEFVATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACNAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVVVQ-LSECRQHLELLLDSIPTMFQESKIPESAFGAAVKA 623
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SC24C_ARATH (Protein transport protein Sec24-like CEF OS=Arabidopsis thaliana GN=CEF PE=1 SV=2) HSP 1 Score: 291.967 bits (746), Expect = 3.611e-78 Identity = 142/201 (70.65%), Postives = 164/201 (81.59%), Query Frame = 1 Query: 1 DMGPVRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLPEGPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDVEDVYTPLQSDIIVPGFRVPVNNLKIMLENISSTAQNHKLPRQPSGSLIQS 603 + GPVRCSRCK Y+NPFMKFIDQGR+FIC+LCG+TDETPRDY CNL ELCRGTV+FVATKEYMVRDPMPAV+FFLIDVSMNA+QTGATAAACSAI QV+SDLPEGPRT VGIATFDSTIHFYNLKRALQQPLMLIVPDV+DVYTPL++D+IV +L+I+LE+I + Q K P G+ +++ Sbjct: 428 ESGPVRCSRCKGYVNPFMKFIDQGRKFICNLCGYTDETPRDYQCNLGPDGRRRDADERPELCRGTVDFVATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACSAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVIVQ-LSECRQHLEILLESIPTMFQESKSPESAFGAAVKA 627
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SC24A_ARATH (Protein transport protein Sec24-like At3g07100 OS=Arabidopsis thaliana GN=At3g07100 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.640e-38 Identity = 68/162 (41.98%), Postives = 104/162 (64.20%), Query Frame = 1 Query: 7 GPVRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLPEGPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDVEDVYTPLQSDIIV 492 G +RC RC+ Y+NPF+ F D GR++ C++C ++ P +Y +L EL +G+VE +A EYMVR PMP ++FFLIDVS++A ++G I + +LP PRT +G T+DST+HFYN+K +L QP M++V D++D++ PL D++V Sbjct: 367 GIIRCRRCRTYVNPFVTFTDSGRKWRCNICSMLNDVPGEYFSHLDATGRRMDMDQRPELTKGSVEIIAPTEYMVRPPMPPIYFFLIDVSISATKSGMLEVVAQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNMKSSLSQPQMMVVSDLDDIFVPLPDDLLV 528
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SC24B_HUMAN (Protein transport protein Sec24B OS=Homo sapiens GN=SEC24B PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 7.882e-33 Identity = 69/160 (43.12%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 13 VRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLPEGPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDVEDVYTPLQSDIIV 492 VRC C+ YINPF+ FIDQ RR+ C+LC ++ P ++ N E+ TVEF+A+ +YM+R P PAV+ F++DVS NA++ G C ++ + + LP RT +G TFDSTIHFYNL+ L QP MLIV D++DV+ P ++V Sbjct: 603 VRCRSCRTYINPFVSFIDQ-RRWKCNLCYRVNDVPEEFMYN-PLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFLPTPDSLLV 760
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SC24A_BOVIN (Protein transport protein Sec24A OS=Bos taurus GN=SEC24A PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.912e-32 Identity = 68/160 (42.50%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 13 VRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLPEGPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDVEDVYTPLQSDIIV 492 VRC C+ YINPF+ F+DQ RR+ C+LC ++ P ++ N E+ T+EF+A EYM+R P P V+ F+ DVS NA++TG + C ++ + LP RT +G TFDSTIHFY+L+ L QP MLIV D+EDV+ P+ +++V Sbjct: 435 VRCRSCRTYINPFVSFLDQ-RRWKCNLCYRVNDVPEEFMYN-PLTRVYGEPHRRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAIETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIEDVFIPMPENLLV 592
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SC24A_HUMAN (Protein transport protein Sec24A OS=Homo sapiens GN=SEC24A PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 6.672e-32 Identity = 68/160 (42.50%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 13 VRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLPEGPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDVEDVYTPLQSDIIV 492 VRC C+ YINPF+ F+DQ RR+ C+LC ++ P ++ N E+ T+EF+A EYM+R P P V+ F+ DVS NA++TG + C ++ + LP RT +G TFDSTIHFY L+ +L QP MLIV D+EDV+ P+ +++V Sbjct: 429 VRCRSCRTYINPFVSFLDQ-RRWKCNLCYRVNDVPEEFLYN-PLTRVYGEPHRRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQESLSQPQMLIVSDIEDVFIPMPENLLV 586
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SC24A_MOUSE (Protein transport protein Sec24A OS=Mus musculus GN=Sec24a PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 8.714e-32 Identity = 67/160 (41.88%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 13 VRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLPEGPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDVEDVYTPLQSDIIV 492 VRC C+ YINPF+ F+DQ RR+ C+LC ++ P ++ N E+ T+EF+A EYM+R P P V+ F+ DVS NA++TG + C ++ + LP RT +G TFDSTIHFY+L+ L QP MLIV D++DV+ P+ +++V Sbjct: 426 VRCRSCRTYINPFVNFLDQ-RRWKCNLCYRVNDVPEEFMYN-PLTRVYGEPHKRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAIETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIDDVFIPMPENLLV 583
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SC24C_HUMAN (Protein transport protein Sec24C OS=Homo sapiens GN=SEC24C PE=1 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 2.146e-30 Identity = 70/188 (37.23%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 1 DMGPVRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRD--PMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLP-----EGPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDVEDVYTPLQSDIIVPGFRVPVNNLKIMLENI 543 + GP+RC+RCKAY+ PFM+FI+ GRRF C C ++ P Y +L EL G+ EF+AT +Y + P P F F+IDVS NA++TG C + ++ LP E VG T++ +HFYN+K +L QP M++V DV D++ PL + GF V VN + ++ ++ Sbjct: 419 ESGPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPL-----LDGFLVNVNESRAVITSL 601
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SEC24_DICDI (Protein transport protein SEC24 OS=Dictyostelium discoideum GN=sec24 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 6.463e-27 Identity = 66/180 (36.67%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 13 VRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXX-ELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLPE--GPRTMVGIATFDSTIHFYNLK-RALQQPLMLIVPDVEDVYTPLQSDIIV---PGFRVPVNNLKIM 531 +RC RC+ YINPF+ +++ G R+ C++C ++TP+DY + EL +G VEF+A+ +Y+VR P P +FF++DV ++ +G A +AI + DL E R GI TFD ++HFYNLK +P M +V D++ VY P D +V G V N L I+ Sbjct: 332 IRCRRCRTYINPFVTWLNGGGRWRCNMCENINDTPQDYFSPIDFTTGKRSDILNRPELQKGCVEFLASSDYLVRPPQPPTYFFIVDVCYESIVSGMLNTAINAIKTTLGDLIEKSNGRARFGIMTFDDSLHFYNLKSNPSNRPQMFVVTDMDQVYVPPFEDFLVNLKDGLEVVENTLNII 511
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SEC24_COCIM (Protein transport protein SEC24 OS=Coccidioides immitis GN=SEC24 PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 6.463e-27 Identity = 66/200 (33.00%), Postives = 108/200 (54.00%), Query Frame = 1 Query: 16 RCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLPE-GPRTMVGIATFDSTIHFYNLKR---ALQQPLMLIVPDVEDVYTPLQSDIIVPGFRVPVNNLKIMLENISSTAQNHKLPRQPSGSLIQS 603 RC RC++YINPF+ F+D G R+ C++C T++ P+ + + EL VEFVA +EYMVR P P V+ FLIDVS +++ TG A A I + + +P RT +G DS++H++ + R P ML+V D+++ + P+ D++V N++I L+ + QN + GS +++ Sbjct: 254 RCRRCRSYINPFVTFLDHGHRWRCNMCNLTNDVPQGFDWDATAQQALDRWQRP-ELNHAVVEFVAPQEYMVRPPQPLVYLFLIDVSYSSVTTGLLATAARCIKESLDRIPNTDRRTRLGFIAVDSSLHYFTIPRDGSESSDPSMLVVSDLDEPFLPIPGDLLVT-LTECRENIEIFLDKLQEMFQNTQNGGSAMGSALRA 451 The following BLAST results are available for this feature:
BLAST of DY260760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260760 ID=DY260760; Name=DY260760; organism=Citrus clementina; type=EST; length=980bpback to top |