DY262755

Overview
NameDY262755
Unique NameDY262755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1223
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262755 vs. ExPASy Swiss-Prot
Match: CAP2_ARATH (Putative clathrin assembly protein At2g25430 OS=Arabidopsis thaliana GN=At2g25430 PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 7.123e-77
Identity = 163/268 (60.82%), Postives = 191/268 (71.27%), Query Frame = 3
Query:  324 TIRKAIGAVKDQTSIGLAKVASNLAPELEVAIVKATSHDDDPADEKYIREILSLTSYSRGYVHACMTAVSKRLGKTRDWLVAIKTLMLIHRLLNDGDPVFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELILFD-----XXXXXXXXXXHNNXXXXXXXXXXXXXXXXXXEYNY-------GDSRID-TGYGNYGMTRRSRSYGDVSEAAGGG-----KEKKW*LR*GNGTGKEIW-EMGELQKLWNRFL 1070
            +IRKAIGAVKDQTSIG+AKVASN+AP+LEVAIVKATSHDDDPA EKYIREIL+LTS SRGY+ AC+T+VS+RL KTRDW+VA+K LML+HRLLN+GDP+FQEEILY+TRRGTR+LNMSDFRDEAHSSSWDHSAFVRTYA YLDQRLEL LF+               H+N                   Y+Y        D R D  GYG  G+ +RSRSYGD++E  GGG      EKK        T + I+ +MG LQ+L +RFL
Sbjct:    4 SIRKAIGAVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPASEKYIREILNLTSLSRGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILYSTRRGTRMLNMSDFRDEAHSSSWDHSAFVRTYAGYLDQRLELALFERKSGVSVNSGGNSSHHSNNDDRYGRGRDDFRSPPPRSYDYENGGGGGSDFRGDNNGYG--GVPKRSRSYGDMTEMGGGGGGGGRDEKKVVTPLREMTPERIFGKMGHLQRLLDRFL 269          
BLAST of DY262755 vs. ExPASy Swiss-Prot
Match: CAP1_ARATH (Probable clathrin assembly protein At4g32285 OS=Arabidopsis thaliana GN=At4g32285 PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.343e-75
Identity = 157/253 (62.06%), Postives = 187/253 (73.91%), Query Frame = 3
Query:  324 TIRKAIGAVKDQTSIGLAKVASNLAPELEVAIVKATSHDDDPADEKYIREILSLTSYSRGYVHACMTAVSKRLGKTRDWLVAIKTLMLIHRLLNDGDPVFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELILFD---XXXXXXXXXXHNNXXXXXXXXXXXXXXXXXXEYNYGDSRIDTGYGNYGMTRRSRSYGDVSEAAGGGKEKKW*LR*GNGTGKEIW-EMGELQKLWNRFL 1070
            ++RKAIG VKDQTSIG+AKVASN+AP+LEVAIVKATSHDDD + +KYIREILSLTS SRGYVHAC+T+VS+RL KTRDW+VA+K LML+HRLLN+GDP+FQEEILYATRRGTR+LNMSDFRDEAHSSSWDHSAFVRTYA YLDQRLEL LF+              +N                   Y+Y     +TG G +GM +RSRS+GDV+E  G  +EKK        T + I+ +MG LQ+L +RFL
Sbjct:    4 SMRKAIGVVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDQSSDKYIREILSLTSLSRGYVHACVTSVSRRLKKTRDWIVALKALMLVHRLLNEGDPLFQEEILYATRRGTRILNMSDFRDEAHSSSWDHSAFVRTYASYLDQRLELALFERRGRNGGGSSSSHQSNGDDGYNRSRDDFRSPPPRTYDY-----ETGNG-FGMPKRSRSFGDVNE-IGAREEKKSVTPLREMTPERIFGKMGHLQRLLDRFL 249          
BLAST of DY262755 vs. ExPASy Swiss-Prot
Match: CAP3_ARATH (Putative clathrin assembly protein At4g02650 OS=Arabidopsis thaliana GN=At4g02650 PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 2.465e-53
Identity = 102/153 (66.67%), Postives = 128/153 (83.66%), Query Frame = 3
Query:  312 MSTSTIRKAIGAVKDQTSIGLAKVA--SNLAPELEVAIVKATSHDDDPADEKYIREILSLTSYSRGYVHACMTAVSKRLGKTRDWLVAIKTLMLIHRLLNDGDPVFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLE 764
            M +S +++AIGAVKDQTS+GLAKV   S+   ELE+A+VKAT HDD PA++KYIREIL LTSYSR YV AC+  +S+RL KT++W VA+KTL+LI RLL DGD  +++EI +ATRRGTRLLNMSDFRD + S SWD+SAFVRTYA+YLD+RL+
Sbjct:    1 MGSSKLKRAIGAVKDQTSVGLAKVGGRSSSLTELEIAVVKATRHDDYPAEDKYIREILCLTSYSRNYVSACVATLSRRLNKTKNWSVALKTLILIQRLLTDGDRAYEQEIFFATRRGTRLLNMSDFRDASQSDSWDYSAFVRTYALYLDERLD 153          
BLAST of DY262755 vs. ExPASy Swiss-Prot
Match: CAP4_ARATH (Putative clathrin assembly protein At1g03050 OS=Arabidopsis thaliana GN=At1g03050 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.726e-52
Identity = 101/153 (66.01%), Postives = 129/153 (84.31%), Query Frame = 3
Query:  312 MSTSTIRKAIGAVKDQTSIGLAKVASNLAP--ELEVAIVKATSHDDDPADEKYIREILSLTSYSRGYVHACMTAVSKRLGKTRDWLVAIKTLMLIHRLLNDGDPVFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLE 764
            M +S  ++AIGAVKDQTS+GLAKV    A   EL+VAIVKAT H++ PA+EKYIREILSLTSYSR Y++AC++ +S+RL KT+ W VA+KTL+LI RLL +GD  +++EI +ATRRGTRLLNMSDFRD + S+SWD+SAFVRTYA+YLD+RL+
Sbjct:    1 MGSSKFKRAIGAVKDQTSVGLAKVNGRSASLSELDVAIVKATRHEEFPAEEKYIREILSLTSYSRSYINACVSTLSRRLNKTKCWTVALKTLILIQRLLGEGDQAYEQEIFFATRRGTRLLNMSDFRDVSRSNSWDYSAFVRTYALYLDERLD 153          
BLAST of DY262755 vs. ExPASy Swiss-Prot
Match: CAP5_ARATH (Putative clathrin assembly protein At1g05020 OS=Arabidopsis thaliana GN=At1g05020 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.393e-40
Identity = 79/157 (50.32%), Postives = 117/157 (74.52%), Query Frame = 3
Query:  321 STIRKAIGAVKDQTSIGLAKVASNLA-----PELEVAIVKATSHDDD-PADEKYIREILSLTSYSRGYVHACMTAVSKRLGKTRDWLVAIKTLMLIHRLLNDGDPVFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELIL 773
            S ++KAIGAVKDQTSI LAKVA+          LEVAI+KATSHD++ P D++ + EIL + S  + +  +C  A+ +R+G+TR+W+VA+K+L+L+ R+  DGDP F  E+L+A +RG ++LN+S FRD+++S  WD +AFVRT+A+YLD+RL+  L
Sbjct:    3 SKLKKAIGAVKDQTSISLAKVANGATGGGDLTTLEVAILKATSHDEEVPIDDRLVTEILGIISSKKSHAASCAAAIGRRIGRTRNWIVALKSLVLVLRIFQDGDPYFPREVLHAMKRGAKILNLSSFRDDSNSCPWDFTAFVRTFALYLDERLDCFL 159          
BLAST of DY262755 vs. ExPASy Swiss-Prot
Match: CAP8_ARATH (Putative clathrin assembly protein At2g01600 OS=Arabidopsis thaliana GN=At2g01600 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 3.348e-34
Identity = 75/147 (51.02%), Postives = 113/147 (76.87%), Query Frame = 3
Query:  330 RKAIGAVKDQTSIGLAKVASNLAPELEVAIVKATSHDDDPADEKYIREILSLTSYSRGY--VHACMTAVSKRLGKTRDWLVAIKTLMLIHRLLNDGDPVFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLE 764
            RKA GA+KD T +GL +V S  A +L+VAIVKAT+H + P  ++++R+I + TS +R    V  C+ A+S+RL KTR+W VA+KTL++IHRLL +GDP F+EE+L  ++RG R+L +S+F+D++   +WD SA+VRTYA++L++RLE
Sbjct:    8 RKAYGALKDSTKVGLVRVNSEYA-DLDVAIVKATNHVECPPKDRHLRKIFAATSVTRARADVAYCIHALSRRLHKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRG-RILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLE 152          
BLAST of DY262755 vs. ExPASy Swiss-Prot
Match: CAP7_ARATH (Putative clathrin assembly protein At5g57200 OS=Arabidopsis thaliana GN=At5g57200 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.661e-33
Identity = 76/151 (50.33%), Postives = 112/151 (74.17%), Query Frame = 3
Query:  321 STIRKAIGAVKDQTSIGLAKVASNLAPELEVAIVKATSHDDDPADEKYIREILSLTSY--SRGYVHACMTAVSKRLGKTRDWLVAIKTLMLIHRLLNDGDPVFQEEIL-YATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLE 764
            ++ RKA GA+KD T++GLAKV S    +L++AIVKAT+H + P  E+++R+I S TS    R  V  C+ A+SKRL KTR+W+VA+K L++IHR L +GDP F+EE+L Y+ RR   +L +S+F+D+    +WD SA+VRTYA++L++RLE
Sbjct:    5 TSFRKAYGALKDTTTVGLAKVNSEFK-DLDIAIVKATNHVESPPKERHVRKIFSATSVIQPRADVAYCIHALSKRLSKTRNWVVAMKVLIVIHRTLREGDPTFREELLNYSHRR--HILRISNFKDDTSPLAWDCSAWVRTYALFLEERLE 152          
BLAST of DY262755 vs. ExPASy Swiss-Prot
Match: CAP6_ARATH (Putative clathrin assembly protein At4g25940 OS=Arabidopsis thaliana GN=At4g25940 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.834e-33
Identity = 73/150 (48.67%), Postives = 109/150 (72.67%), Query Frame = 3
Query:  321 STIRKAIGAVKDQTSIGLAKVASNLAPELEVAIVKATSHDDDPADEKYIREILSLTSY--SRGYVHACMTAVSKRLGKTRDWLVAIKTLMLIHRLLNDGDPVFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLE 764
            ++ RKA+GA+KD T++ +AKV S    +L+VAIVKAT+H +    E++IR I S TS    R  V  C+ A++KRL KTR+W+VAIK L++IHR L +GDP F+EE+L  + RG  +L +S+F+D+    +WD SA++RTYA++L++RLE
Sbjct:    5 NSFRKAVGAIKDSTTVSIAKVNSEFK-DLDVAIVKATNHVESAPKERHIRRIFSATSVVQPRADVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTLREGDPTFREELLNYSHRG-HILRISNFKDDTSPLAWDCSAWIRTYALFLEERLE 152          
BLAST of DY262755 vs. ExPASy Swiss-Prot
Match: CAP9_ARATH (Putative clathrin assembly protein At1g14910 OS=Arabidopsis thaliana GN=At1g14910 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 3.133e-32
Identity = 72/147 (48.98%), Postives = 110/147 (74.83%), Query Frame = 3
Query:  330 RKAIGAVKDQTSIGLAKVASNLAPELEVAIVKATSHDDDPADEKYIREILSLTSY--SRGYVHACMTAVSKRLGKTRDWLVAIKTLMLIHRLLNDGDPVFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLE 764
            R+A GA+KD T +GL +V S+ A EL+VAIVKAT+H + P  ++++R+I   TS    R  V  C+ A+S+RL KTR+W VA+K L++IHRLL DGDP F+EE+L  +++G R++ +S+F+D++   +WD S +VRTYA++L++RLE
Sbjct:    8 RRAYGALKDTTKVGLVRVNSDYA-ELDVAIVKATNHVECPPKDRHLRKIFLATSAIRPRADVAYCIHALSRRLHKTRNWTVALKALLVIHRLLRDGDPTFREELLNFSQKG-RIMQISNFKDDSSPVAWDCSGWVRTYALFLEERLE 152          
BLAST of DY262755 vs. ExPASy Swiss-Prot
Match: CAP10_ARATH (Putative clathrin assembly protein At5g35200 OS=Arabidopsis thaliana GN=At5g35200 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.008e-30
Identity = 68/152 (44.74%), Postives = 109/152 (71.71%), Query Frame = 3
Query:  315 STSTIRKAIGAVKDQTSIGLAKVASNLAPELEVAIVKATSHDDDPADEKYIREILSLTSYSR--GYVHACMTAVSKRLGKTRDWLVAIKTLMLIHRLLNDGDPVFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLE 764
            S S++R+ +GA+KD T++ LAKV S+   EL++AIVKAT+H + P+ E+YIR I    S +R    V  C+ A+++RL +T +W VA+KTL++IHR L + D  F EE++  +R  + +LNMS F+D++  ++W +SA+VR YA++L++RLE
Sbjct:    7 SQSSLRRYLGAIKDTTTVSLAKVNSDYK-ELDIAIVKATNHVERPSKERYIRAIFMAISATRPRADVAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDQTFHEEVINYSRSRSHMLNMSHFKDDSGPNAWAYSAWVRFYALFLEERLE 157          
The following BLAST results are available for this feature:
BLAST of DY262755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CAP2_ARATH7.123e-7760.82Putative clathrin assembly protein At2g25430 OS=Ar... [more]
CAP1_ARATH1.343e-7562.06Probable clathrin assembly protein At4g32285 OS=Ar... [more]
CAP3_ARATH2.465e-5366.67Putative clathrin assembly protein At4g02650 OS=Ar... [more]
CAP4_ARATH2.726e-5266.01Putative clathrin assembly protein At1g03050 OS=Ar... [more]
CAP5_ARATH2.393e-4050.32Putative clathrin assembly protein At1g05020 OS=Ar... [more]
CAP8_ARATH3.348e-3451.02Putative clathrin assembly protein At2g01600 OS=Ar... [more]
CAP7_ARATH1.661e-3350.33Putative clathrin assembly protein At5g57200 OS=Ar... [more]
CAP6_ARATH4.834e-3348.67Putative clathrin assembly protein At4g25940 OS=Ar... [more]
CAP9_ARATH3.133e-3248.98Putative clathrin assembly protein At1g14910 OS=Ar... [more]
CAP10_ARATH1.008e-3044.74Putative clathrin assembly protein At5g35200 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DD10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262755 ID=DY262755; Name=DY262755; organism=Citrus clementina; type=EST; length=1223bp
CTTCTCTTTGACCTCTTTCTGTCCTCCACACTAAAACGAAAGAAAAAGAA
TCTAGAAGCCTAAACTCACCTCAGCTTTGAGTCAAAACGACGCCGGTTAA
CTCACCGGCGTGTCTCTCTTCTCCACAGATCTAAACGGTATATTCAAAAG
CTTCTCAGTTCTAGCGACCACCTAGTTAATGCTAATTAAGCACTCTTGAG
CTTAATTAATCACTCAATCTCAACTGTTTAAACGAACCAAACCATAACCG
TTTTGATCTTTACTCAGTTGAAAAAAGAACTTGTTCAAGTTTCAAAGAAT
CAACGGTAGCGATGTCGACGAGCACTATTCGAAAAGCGATCGGGGCCGTT
AAGGACCAGACGAGCATAGGCTTAGCGAAAGTGGCGAGCAACCTGGCGCC
GGAGCTGGAAGTCGCGATAGTCAAAGCCACGAGCCACGACGACGATCCGG
CTGACGAGAAATACATTCGCGAGATCTTGAGCTTGACCTCGTATTCTCGC
GGCTACGTGCACGCATGCATGACGGCTGTGTCGAAGCGTCTGGGGAAGAC
GCGCGACTGGCTCGTGGCTATCAAGACGCTCATGCTGATTCACCGGCTCC
TGAACGACGGCGATCCGGTGTTTCAAGAGGAGATCTTGTACGCGACGAGG
AGAGGAACGCGGCTTTTGAACATGTCCGATTTCAGAGACGAGGCTCACTC
GAGCTCGTGGGACCACTCGGCTTTTGTAAGAACTTATGCTATGTATTTAG
ATCAGAGACTTGAATTGATTTTGTTTGATAAAAAGAGTGGCTCTAAGTCT
GGTTCTAGTCATAATAATGGATTTGGATCTAGAGATAGGGATGATTTTCG
ATCACCGCCACCTAGACCTCCTGAGTATAATTATGGGGACTCTAGAATTG
ATACTGGTTACGGGAATTATGGGATGACGAGGAGATCTAGATCTTATGGT
GATGTGAGTGAGGCTGCAGGTGGGGGGAAGGAAAAAAAATGGTGACTCCG
TTGAGGGAATGGAACCGGAAAGGAAATTTGGGAAATGGGGGAATTGCAAA
AACTCTGGAATCGGTTCTTGGTCGGGAAAACCCTCTGGTTTTGGCAAAAA
AAAAAAGGAATTGGTTTGATTGGCCCTGTATCCCAAGGGTTAAGGAAAAT
TTTTCCAATTTAGGCTTGAATATTTTGGGAAGGGTTAACCCGGGTGTTAT
TTTTAAAAAATTTTTTTAGAAAA
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