DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14824 contig Ccv1_Contig14824:251..1572. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 6.765e-28
Identity = 59/140 (42.14%), Postives = 93/140 (66.43%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIK-VLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            EI  S LK   K+  G++  +YKG +    VAIK +  NE +N  +  EF +E+ I+ ++RH N+V  + ACT PP L  +TE++ GGS+YD LH +K  + + L  ++AI +++GMNYLH + +IHRD+K+ NLL++E+
Sbjct:  656 EISFSELKISSKLGEGTFGVVYKGLWRGSSVAIKQIKINEDVNNQVLEEFRKELTILSRLRHPNIVLLMAACTAPPNLCFITEYLPGGSLYDALHSKKIKMNMQLYKKLAIQIAQGMNYLHLSGVIHRDIKSLNLLLDEH 795          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: DRKA_DICDI (Probable serine/threonine-protein kinase drkA OS=Dictyostelium discoideum GN=drkA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 6.765e-28
Identity = 61/141 (43.26%), Postives = 95/141 (67.38%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMNEN 557
            +ID   +K   +I  G+Y ++Y G +    VA+K L   ++NENI +EF +E+++M+ +RH NV+QF+G+C  PP + I TE+M  GS+Y  LH Q   L+  LL+++ ID +KG+ YLH +   I+HRDLK+ NLL++EN
Sbjct:  368 DIDIHQIKIGVRIGKGNYGEVYLGTWRGSQVAVKKLPAHNINENILKEFHREINLMKNLRHPNVIQFLGSCLIPPDICICTEYMPRGSLYSILHDQALQLQWSLLIKMMIDAAKGVIYLHNSTPVILHRDLKSHNLLVDEN 508          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: DRKB_DICDI (Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.712e-26
Identity = 58/141 (41.13%), Postives = 93/141 (65.96%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMNEN 557
            +ID   +K   +I  G++ ++Y G +    VA+K L   ++NENI +EF +E+++M+ +RH NV+QF+G+C   P + I TE+M  GS+Y  LH +K  +   L+ R+ ID +KG+ YLH +   I+HRDLK+ NLL++EN
Sbjct:  385 DIDTQQIKIGVRIGKGNFGEVYLGTWRGSQVAVKKLPAHNINENILKEFHREINLMKNLRHPNVIQFLGSCLISPDICICTEYMPRGSLYSILHNEKIKISWSLVKRMMIDAAKGIIYLHGSTPVILHRDLKSHNLLVDEN 525          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: YR818_MIMIV (Putative serine/threonine-protein kinase/receptor R818 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R818 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.848e-26
Identity = 63/150 (42.00%), Postives = 94/150 (62.67%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL-LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN-GVRDSD 575
            D WE+D   L F   + SG   +++K  +   +VA+K L N ++ ++  R F QE+H M  +RH NVV F+ A TRPP + IV EFMS GS+YD L  +      P+L +R+A   +KGM++LH ++I+HRDLK+ NLL++    V+ SD
Sbjct:  784 DEWEVDFHELDFMESLGSGGSGEVFKAMWKGTEVAVKKLVNSNITKDAERNFKQEIHRMTSLRHPNVVLFMAASTRPPNMCIVMEFMSLGSLYDLLGNELVTEIPPVLRIRIAYQAAKGMHFLHSSDIVHRDLKSLNLLLDSKWNVKVSD 933          

HSP 2 Score: 82.8037 bits (203), Expect = 5.029e-15
Identity = 50/160 (31.25%), Postives = 92/160 (57.50%), Query Frame = 3
Query:   96 GINHVN--IPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH--KQKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMNEN 557
            GI   N  + + G+  W I+   ++   +I  GSY  +  G + + +VA+K    + ++E    EF  E+  + ++RH +++  IGAC + P + IVTEFM  GS+ + +   K +  LK+ +L + A+    G+ YLH ++  IIHRD+K +N+L++++
Sbjct: 1371 GIKQENEYLSSAGLCRWIINYDDIQIGKQIGVGSYGIVNMGKWKNINVAVKKFVKQKIDEKQMLEFRAEIAFLSQLRHPHIILMIGACLKRPNICIVTEFMGNGSLRNVIKTTKPEWKLKIKMLYQTAL----GIGYLHNSDPIIIHRDIKPSNILVDDS 1526          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: YR831_MIMIV (Putative serine/threonine-protein kinase/receptor R831 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R831 PE=4 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.143e-25
Identity = 60/148 (40.54%), Postives = 97/148 (65.54%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKC-GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN-GVRDSD 575
            WEID S L+    + +G Y ++YK  +   +VA+K+++++H+++++ R F +EV IM  +RH NVV F+ A T+ P + IV EFMS GS+YD L  +    +   L +++A   SKGM++LH + I+HRDLK+ NLL++    V+ SD
Sbjct:  779 WEIDFSELEIGETLGTGGYGEVYKSIWKGTEVAVKLISSKHVSKDMERSFFEEVKIMTSLRHPNVVLFMAASTKSPNMCIVMEFMSLGSLYDLLGNELIPEIPYALKIKMAYQASKGMHFLHSSGIVHRDLKSLNLLLDSKWNVKVSD 926          

HSP 2 Score: 92.0485 bits (227), Expect = 8.289e-18
Identity = 48/142 (33.80%), Postives = 81/142 (57.04%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMNEN 557
            W I+   +    +I  GSY  ++ G +   DVA+K    + L+E    EF  E+  + +++H N+V FIGAC + P + IVTE+M  G++ D L      +     L++    + G++YLH +N  I+HRD+K AN+L++E+
Sbjct: 1357 WIINYDEISIGKQIGLGSYGIVFNGKWKGVDVAVKKFVKQKLSETQLLEFRAEMAFLSELKHSNIVTFIGACIKKPNICIVTEYMRMGNLRDVLKNPDIKITFANKLKLLYGAAMGIDYLHSSNPMIVHRDIKPANILVDEH 1498          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.194e-24
Identity = 56/144 (38.89%), Postives = 92/144 (63.89%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLT----NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQK-CGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            W  D S L   +K  SG++  +Y+G +  + VA+K++      E     + ++F  EV ++ ++ H N+VQFI AC +PP   I+TE+MS G++  YL+K++   L +  +LR+A+D+S+GM YLH   +IHRDLK+ NLL+N+
Sbjct:   79 WTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTHKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLND 222          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: CTR1_ARATH (Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.474e-24
Identity = 60/136 (44.12%), Postives = 89/136 (65.44%), Query Frame = 3
Query:  159 LKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLP--LLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMNE 554
            L  + KI +GS+  +++  +   DVA+K+L  +  +     EF +EV IM+++RH N+V F+GA T+PP L IVTE++S GS+Y  LHK     +L     L +A DV+KGMNYLH  N  I+HRDLK+ NLL+++
Sbjct:  551 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDK 686          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.841e-23
Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMNEN 557
            EI    + FE  I +GS+  +YKG    + VA+K+L  ++ +      F +EVH+M K+ H N+  F+GACT P R  IVTE +  G++   LH QK  L L L +R+A D + G+N+LH +N   +HRD+K++NLL++EN
Sbjct:   18 EIRPEEINFEELIGTGSFGKVYKGRCRQKAVAVKLLHKQNFDAATLSAFRKEVHLMSKIYHPNICLFMGACTIPGRCVIVTELVPKGNLETLLHDQKIQLPLYLRMRMARDAALGINWLHESNPVFVHRDIKSSNLLVDEN 158          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: ABL_MLVAB (Tyrosine-protein kinase transforming protein Abl OS=Abelson murine leukemia virus GN=ABL PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.017e-23
Identity = 61/181 (33.70%), Postives = 100/181 (55.25%), Query Frame = 3
Query:   54 HHHVV----------YPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            HHH            YP  ++ +  I  V+      D WE++ + +  +HK+  G Y ++Y+G +  +S  VA+K L  + +      EF +E  +M++++H N+VQ +G CTR P  +I+TEFM+ G++ DYL +  +  +   +LL +A  +S  M YL + N IHRDL A N L+ EN
Sbjct:   86 HHHSTVADGLITTLHYPAPKRNKPTIYGVS---PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 260          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: ABL1_MOUSE (Proto-oncogene tyrosine-protein kinase ABL1 OS=Mus musculus GN=Abl1 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 5.017e-23
Identity = 61/181 (33.70%), Postives = 100/181 (55.25%), Query Frame = 3
Query:   54 HHHVV----------YPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            HHH            YP  ++ +  I  V+      D WE++ + +  +HK+  G Y ++Y+G +  +S  VA+K L  + +      EF +E  +M++++H N+VQ +G CTR P  +I+TEFM+ G++ DYL +  +  +   +LL +A  +S  M YL + N IHRDL A N L+ EN
Sbjct:  200 HHHSTVADGLITTLHYPAPKRNKPTIYGVS---PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 374          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
Y9955_DICDI6.765e-2842.14Probable serine/threonine-protein kinase DDB_G0267... [more]
DRKA_DICDI6.765e-2843.26Probable serine/threonine-protein kinase drkA OS=D... [more]
DRKB_DICDI3.712e-2641.13Probable serine/threonine-protein kinase drkB OS=D... [more]
YR818_MIMIV4.848e-2642.00Putative serine/threonine-protein kinase/receptor ... [more]
YR831_MIMIV3.143e-2540.54Putative serine/threonine-protein kinase/receptor ... [more]
HT1_ARATH1.194e-2438.89Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
CTR1_ARATH3.474e-2444.12Serine/threonine-protein kinase CTR1 OS=Arabidopsi... [more]
SHKC_DICDI3.841e-2341.13Dual specificity protein kinase shkC OS=Dictyostel... [more]
ABL_MLVAB5.017e-2333.70Tyrosine-protein kinase transforming protein Abl O... [more]
ABL1_MOUSE5.017e-2333.70Proto-oncogene tyrosine-protein kinase ABL1 OS=Mus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
back to top