DY263049
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY263049 vs. ExPASy Swiss-Prot
Match: CRY1_SINAL (Cryptochrome-1 OS=Sinapis alba GN=PHR1 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.435e-53 Identity = 106/180 (58.89%), Postives = 136/180 (75.56%), Query Frame = 2 Query: 596 RTIVWFRRDLRIEDNPALAAAARDGSVFPVYTWCPKEEGQFYPGRVSRWWLKQSLSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIQENLVKLGISVQS-NMKICYMNFGKYMMRKEMVF--------KIFDAYLGKVVCQSKWKPAFNSSSQGVW 1108 +TIVWFRRDLRIEDNPALAAAA +GSVFPV+ WCP+EEGQFYPGR SRWW+KQSL++L QSLK+LG+EL L KT ST++A+L+C+ A ATKVVFNHLYDPVSLVRDH+++E LV+ GISVQS N +C M+ G+Y +++ + K D + VV W+ S+++ VW Sbjct: 6 KTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLRQSLKALGSELTLIKTHSTVSAILDCVRATGATKVVFNHLYDPVSLVRDHTVKEKLVERGISVQSYNGDLC-MSPGRYTVKRANLLLVLILTGKKCLDMSVESVVLPPPWRLMPLSAAETVW 184
BLAST of DY263049 vs. ExPASy Swiss-Prot
Match: CRY2_ARATH (Cryptochrome-2 OS=Arabidopsis thaliana GN=CRY2 PE=1 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 6.667e-51 Identity = 102/171 (59.65%), Postives = 127/171 (74.27%), Query Frame = 2 Query: 596 RTIVWFRRDLRIEDNPALAAAARDGSVFPVYTWCPKEEGQFYPGRVSRWWLKQSLSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIQENLVKLGISVQS-NMKICYMNFGKYMMRKEMVFKIFDAYLGKVVCQSKWKPAFNSSSQGV 1105 +TIVWFRRDLRIEDNPALAAAA +GSVFPV+ WCP+EEGQFYPGR SRWW+KQSL++L QSLK+LG++L L KT +T++A+L+CI ATKVVFNHLYDPVSLVRDH+++E LV+ GISVQS N + Y + Y K F F++Y WK + S + V Sbjct: 6 KTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLSQSLKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISVQSYNGDLLYEPWEIY-CEKGKPFTSFNSY---------WKKCLDMSIESV 166
BLAST of DY263049 vs. ExPASy Swiss-Prot
Match: CRY1_ARATH (Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.916e-36 Identity = 71/135 (52.59%), Postives = 98/135 (72.59%), Query Frame = 2 Query: 560 LRGSESVNMGGNRTIVWFRRDLRIEDNPALAAAARDGSVFPVYTWCPKEEGQFYPGRVSRWWLKQSLSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIQENLVKLGISVQS 964 + GS S G +IVWFRRDLR+EDNPALAAA R G V ++ W P+EEG ++PGRVSRWWLK SL+ L SL+SLG L+ ++ ++A+LL+ + + A+++ FNHLYDP+SLVRDH ++ L GI+V+S Sbjct: 1 MSGSVSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAVRS 135 HSP 2 Score: 25.0238 bits (53), Expect = 1.916e-36 Identity = 14/46 (30.43%), Postives = 21/46 (45.65%), Query Frame = 1 Query: 973 NLLYELWEIYDEKRNGF*NF*CLFGKSCLPKQMETRFQFFLPGRLV 1110 +LLYE WE+ DE F F F + CL + P +++ Sbjct: 139 DLLYEPWEVTDELGRPFSMF-AAFWERCLSMPYDPESPLLPPKKII 183 The following BLAST results are available for this feature:
BLAST of DY263049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263049 ID=DY263049; Name=DY263049; organism=Citrus clementina; type=EST; length=1218bpback to top |