CMJ_chr3_012480.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_012480.1 vs. ExPASy TrEMBL
Match: A0A1S8AD47|A0A1S8AD47_CITLI (Copper/zinc superoxide dismutase (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.150e-54 Identity = 90/93 (96.77%), Postives = 91/93 (97.85%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKVAL 93
MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGN+NNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKV
Sbjct: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKVLF 93
BLAST of CMJ_chr3_012480.1 vs. ExPASy TrEMBL
Match: A0A1S8ADG5|A0A1S8ADG5_CITLI (Copper/zinc superoxide dismutase (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.889e-53 Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0 Query: 2 VNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKVAL 93
VNATVVLTGVVGR+GTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGN+NNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKV
Sbjct: 14 VNATVVLTGVVGRIGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKVLF 105
BLAST of CMJ_chr3_012480.1 vs. ExPASy TrEMBL
Match: O23785|O23785_CITSI (Cu/Zn superoxide dismutase (Fragment) OS=Citrus sinensis OX=2711 GN=sod PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.436e-50 Identity = 81/125 (64.80%), Postives = 101/125 (80.80%), Query Frame = 0 Query: 2 VNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKVALSGPDSVIGRGLVLHSNPSPNPGPGVAWGVIGLD 126
V A V+TG GR GT+SF+ EG+G TTV+G++SG+ PGDHAL+IHTYGNI+N WI+TG PFKPAG G ++NITV +G ATF+IY + LSG +SVIGRGLV+HS+PSP+PG GVAWG IGL
Sbjct: 1 VKAVAVMTGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGADGFLENITVTSEGIATFEIYKTIPLSGTNSVIGRGLVVHSSPSPDPGDGVAWGTIGLS 125
BLAST of CMJ_chr3_012480.1 vs. ExPASy TrEMBL
Match: A0A1S8AD32|A0A1S8AD32_CITLI (Copper/zinc superoxide dismutase OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.518e-46 Identity = 79/84 (94.05%), Postives = 81/84 (96.43%), Query Frame = 0 Query: 2 VNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTKGVIDNITVDVDGTATF 85
VNATVVLTGVVGR+GTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGN+NNVWITTGAPFKPAGTKGVIDNITVDVDG F
Sbjct: 14 VNATVVLTGVVGRIGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGTKGVIDNITVDVDGYCYF 97
BLAST of CMJ_chr3_012480.1 vs. ExPASy TrEMBL
Match: A0A1S8AE78|A0A1S8AE78_CITLI (Copper/zinc superoxide dismutase (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.082e-37 Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0 Query: 26 GTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKVAL 93
GTTTVEGNISGVTPGDHALVIHTYGN+NNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKV
Sbjct: 19 GTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKVLF 86
BLAST of CMJ_chr3_012480.1 vs. ExPASy TrEMBL
Match: A0A067DIC0|A0A067DIC0_CITSI (Sod_Cu domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g031611mg PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.961e-25 Identity = 60/131 (45.80%), Postives = 74/131 (56.49%), Query Frame = 0 Query: 16 GTISFTQEGNGTTTVEGNISGVTP-GDHALVIHTYGNINNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKVALSGPDSVIGRGLVLHSNPSPNP--------------------GPGVAWGVIGL 125
GT++F+QEGN T V G + + P G +ALVIH YG+I + W +TG FKPAG GVI + D +GTA F + K LSG +SV+ RGLVLH S NP GPGV W VIGL
Sbjct: 24 GTVTFSQEGNRQTRVGGRFTDLEPDGAYALVIHQYGDIRDGWKSTGDRFKPAGIAGVIAHFVADDEGTARFDLGTKADLSGENSVMSRGLVLHVFDSSNPCLNVSSGSIPRPDINWDKYLGPGVDWAVIGL 154
BLAST of CMJ_chr3_012480.1 vs. ExPASy TrEMBL
Match: V4SZT3|V4SZT3_CITCL (Sod_Cu domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10002663mg PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.928e-25 Identity = 62/131 (47.33%), Postives = 76/131 (58.02%), Query Frame = 0 Query: 16 GTISFTQEGNGTTTVEGNISGVTP-GDHALVIHTYGNINNVWITTGAPFKPAGTKGVIDNITVDVDGTATFKIYGKVALSGPDSVIGRGLVLH----SNPS--------PNP--------GPGVAWGVIGL 125
GT++F+QEGN T V G + + P G +ALVIH YG+I + W +TG FKPAG GVI + D +GTA F + K LSG +SV+ RGLVLH SNP P P GPGV W VIGL
Sbjct: 43 GTVTFSQEGNRQTRVGGRFTDLEPDGAYALVIHQYGDIRDGWKSTGDRFKPAGIAGVIAHFVADDEGTARFDLGTKADLSGENSVMSRGLVLHVFDSSNPCLNVSSGSIPRPDINWDKYLGPGVDWAVIGL 173
BLAST of CMJ_chr3_012480.1 vs. ExPASy TrEMBL
Match: A0A7G8KP43|A0A7G8KP43_9MAGN (Superoxide dismutase [Cu-Zn] OS=Magnolia sieboldii OX=85868 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 7.595e-24 Identity = 63/152 (41.45%), Postives = 84/152 (55.26%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIY-GKVALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGLDA 127
MV A VL G G GT++FTQEG+G TTV G +SG+ PG H +H G+ N ++TGA F P G + G + N+T DGTATF I ++ L+GP+S+IGR +V+H++P N G VA GVIGL A
Sbjct: 1 MVKAVAVLGGKEGVCGTVNFTQEGDGPTTVTGTLSGLQPGLHGFHVHALGDTTNGCLSTGAHFNPVGKEHGAPEDENRHAGDLGNVTAKEDGTATFTIVDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGVIGLQA 152
BLAST of CMJ_chr3_012480.1 vs. ExPASy TrEMBL
Match: A0A5D2DYX5|A0A5D2DYX5_GOSDA (Superoxide dismutase [Cu-Zn] OS=Gossypium darwinii OX=34276 GN=ES288_A13G121700v1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.251e-23 Identity = 63/151 (41.72%), Postives = 83/151 (54.97%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGLD 126
MV A VL+ G GT+ FTQEG+G TTV GNISG+ PG H +H G+ N ++TG F PAG + G + N+TV DG+A+F I K + LSGP S+IGR +V+H++P N G VA G+IGL
Sbjct: 1 MVKAVAVLSSSEGVSGTVFFTQEGDGPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDVNRHAGDLGNVTVGADGSASFSIVDKQIPLSGPHSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151
BLAST of CMJ_chr3_012480.1 vs. ExPASy TrEMBL
Match: A0A1U8IBS9|A0A1U8IBS9_GOSHI (Superoxide dismutase [Cu-Zn] OS=Gossypium hirsutum OX=3635 GN=LOC107895005 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.251e-23 Identity = 63/151 (41.72%), Postives = 83/151 (54.97%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGLD 126
MV A VL+ G GT+ FTQEG+G TTV GNISG+ PG H +H G+ N ++TG F PAG + G + N+TV DG+A+F I K + LSGP S+IGR +V+H++P N G VA G+IGL
Sbjct: 1 MVKAVAVLSSSEGVSGTVFFTQEGDGPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDVNRHAGDLGNVTVGADGSASFSIVDKQIPLSGPHSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151
BLAST of CMJ_chr3_012480.1 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.148e-26 Identity = 64/151 (42.38%), Postives = 85/151 (56.29%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIY-GKVALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGLD 126
MV A VVL+ G GT+ FTQEG+G TTV GN+SG+ PG H +H G+ N ++TG F PAG + G + NITV DGTATF I ++ L+GP+S++GR +V+H++P N G VA GVIGL
Sbjct: 1 MVKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHADPDDLGRGGHELSKATGNAGGRVACGVIGLQ 151
BLAST of CMJ_chr3_012480.1 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 2.918e-24 Identity = 63/150 (42.00%), Postives = 82/150 (54.67%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGL 125
MV A VL+ G GTI F+QEG+G TTV GN+SG+ PG H +H G+ N ++TG F PAG + G + NITV DGTA+F I K + L+G +SVIGR +V+H +P N G VA G+IGL
Sbjct: 1 MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHGDPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of CMJ_chr3_012480.1 vs. ExPASy Swiss-Prot
Match: SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.901e-24 Identity = 60/151 (39.74%), Postives = 82/151 (54.30%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGLD 126
MV A VL+ G GTI FTQ+G+ TTV GN+SG+ PG H +H G+ N ++TG + PAG + G + NITV DGTA+F + K + L+GP S+IGR +V+H++P N G VA G+IGL
Sbjct: 1 MVKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
BLAST of CMJ_chr3_012480.1 vs. ExPASy Swiss-Prot
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii OX=70770 GN=SODCC PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.407e-24 Identity = 54/122 (44.26%), Postives = 72/122 (59.02%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNP 110
MV VL+ G GTI FTQEG+G TTV GN+SG+ PG H +H G+ N ++TG F PAG + G + N+TV DGTA F I K + L+GP S+IGR +V+H++P
Sbjct: 1 MVKGVAVLSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALGDTTNGCLSTGPHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQIPLTGPHSIIGRAVVVHADP 122
BLAST of CMJ_chr3_012480.1 vs. ExPASy Swiss-Prot
Match: SODC2_OLEEU (Superoxide dismutase [Cu-Zn] 2 OS=Olea europaea OX=4146 GN=OLE5 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 8.435e-24 Identity = 62/151 (41.06%), Postives = 79/151 (52.32%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGLD 126
MV A VL G GT+ FTQEG+G TTV GN+SG+ PG H +H G+ N ++TG F P G + G + NITV DGTA I K + L+GP S+IGR +V+HS+P N G VA G+IGL
Sbjct: 1 MVKAVTVLNSSEGVTGTVYFTQEGDGPTTVTGNLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPVGKEHGAPGDENRHAGDLGNITVGEDGTAAINIVDKQIPLTGPHSIIGRAVVVHSDPDDLGRGGHELSKSTGNAGGRVACGIIGLQ 151
BLAST of CMJ_chr3_012480.1 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum OX=4081 GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 1.651e-23 Identity = 61/151 (40.40%), Postives = 80/151 (52.98%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGLD 126
MV A VL G GTI FTQ+G TTV GNISG+ PG H +H G+ N ++TG + PAG + G + NITV DGTA+F I K + L+GP S+IGR +V+H++P N G +A G+IGL
Sbjct: 1 MVKAVAVLNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQ 151
BLAST of CMJ_chr3_012480.1 vs. ExPASy Swiss-Prot
Match: SODC_SPIOL (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea OX=3562 GN=SODCC PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.053e-23 Identity = 60/150 (40.00%), Postives = 81/150 (54.00%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIY-GKVALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGL 125
M A VVL+ G GT+ F QEG+G TTV GN+SG+ PG H +H G+ N ++TG + P G + G + NITV DGTATF I ++ LSGP+S++GR +V+H+ P N G VA G+IGL
Sbjct: 1 MGKAVVVLSSSEGVSGTVYFAQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPNGKEHGAPEDDVRHAGDLGNITVGDDGTATFTIIDSQIPLSGPNSIVGRAVVVHAEPDDLGRGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CMJ_chr3_012480.1 vs. ExPASy Swiss-Prot
Match: SODC_CAPAN (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum OX=4072 GN=SODCC PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.547e-23 Identity = 59/150 (39.33%), Postives = 82/150 (54.67%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIYG-KVALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGL 125
MV A VL+ GTI F+Q+G+ TTV GN+SG+ PG H +H G+ N ++TG + PAG + G + NITV DGTA+F I ++ L+GP S+IGRG+V+H++P N G VA G+IGL
Sbjct: 1 MVKAVAVLSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVHADPDDLGKGGHELTKTTGNAGGRVACGIIGL 150
BLAST of CMJ_chr3_012480.1 vs. ExPASy Swiss-Prot
Match: SODC1_ARATH (Superoxide dismutase [Cu-Zn] 1 OS=Arabidopsis thaliana OX=3702 GN=CSD1 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.145e-22 Identity = 59/150 (39.33%), Postives = 78/150 (52.00%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGT-----------KGVIDNITVDVDGTATFKIYG-KVALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGL 125
M VL G GTI FTQEG+G TTV G +SG+ PG H +H G+ N ++TG F P G G + NITV DGTATF I ++ L+GP+S++GR +V+H++P N G VA G+IGL
Sbjct: 1 MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSLATGNAGGRVACGIIGL 150
BLAST of CMJ_chr3_012480.1 vs. ExPASy Swiss-Prot
Match: SODC_PINSY (Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris OX=3349 GN=SODCC PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.914e-22 Identity = 56/150 (37.33%), Postives = 79/150 (52.67%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIY-GKVALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGL 125
++ A VVL G G + FTQEG+G TTV G ISG++PG H +H G+ N ++TG F P G + G + N+TV DGT F I ++ LSGP S++GR +V+H++P N G +A GV+GL
Sbjct: 3 LLKAVVVLNGAADVKGVVQFTQEGDGPTTVTGKISGLSPGLHGFHVHALGDTTNGCMSTGPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQIPLSGPHSIVGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGVVGL 152
BLAST of CMJ_chr3_012480.1 vs. Araport11
Match: AT1G08830.2 (| copper/zinc superoxide dismutase 1 | Chr1:2827700-2829053 FORWARD LENGTH=152 | 201606) HSP 1 Score: 88.9669 bits (219), Expect = 2.194e-23 Identity = 59/150 (39.33%), Postives = 78/150 (52.00%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGT-----------KGVIDNITVDVDGTATFKIYG-KVALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGL 125
M VL G GTI FTQEG+G TTV G +SG+ PG H +H G+ N ++TG F P G G + NITV DGTATF I ++ L+GP+S++GR +V+H++P N G VA G+IGL
Sbjct: 1 MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSLATGNAGGRVACGIIGL 150
BLAST of CMJ_chr3_012480.1 vs. Araport11
Match: AT1G08830.1 (| copper/zinc superoxide dismutase 1 | Chr1:2827700-2829053 FORWARD LENGTH=152 | 201606) HSP 1 Score: 88.9669 bits (219), Expect = 2.194e-23 Identity = 59/150 (39.33%), Postives = 78/150 (52.00%), Query Frame = 0 Query: 1 MVNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGT-----------KGVIDNITVDVDGTATFKIYG-KVALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGL 125
M VL G GTI FTQEG+G TTV G +SG+ PG H +H G+ N ++TG F P G G + NITV DGTATF I ++ L+GP+S++GR +V+H++P N G VA G+IGL
Sbjct: 1 MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSLATGNAGGRVACGIIGL 150
BLAST of CMJ_chr3_012480.1 vs. Araport11
Match: AT5G18100.1 (| copper/zinc superoxide dismutase 3 | Chr5:5987221-5988706 FORWARD LENGTH=164 | 201606) HSP 1 Score: 65.4698 bits (158), Expect = 3.822e-14 Identity = 48/151 (31.79%), Postives = 71/151 (47.02%), Query Frame = 0 Query: 2 VNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGT-----------KGVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNPSP-------------NPGPGVAWGVIGLDA 127
+ A ++ G G + F Q+ +GTT V G ISG++PG H IH++G+ N I+TG F P G + NI +G A I K + LSG S++GR +V+H++P N G V G+IGL +
Sbjct: 8 LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGPHFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHADPDDLGKGGHKLSKSTGNAGSRVGCGIIGLQS 158
BLAST of CMJ_chr3_012480.1 vs. Araport11
Match: AT2G28190.1 (| copper/zinc superoxide dismutase 2 | Chr2:12014548-12016303 FORWARD LENGTH=216 | 201606) HSP 1 Score: 66.2402 bits (160), Expect = 4.875e-14 Identity = 50/147 (34.01%), Postives = 70/147 (47.62%), Query Frame = 0 Query: 4 ATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKP-----------AGTKGVIDNITVDVDGTATFKIY-GKVALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGL 125
A VL G G ++ TQ+ +G TTV I+G+TPG H +H +G+ N I+TG F P G + NI + DG A I ++ L+GP+SV+GR V+H S + N G +A GVIGL
Sbjct: 67 AVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGL 213
BLAST of CMJ_chr3_012480.1 vs. Araport11
Match: AT5G18100.2 (| copper/zinc superoxide dismutase 3 | Chr5:5987221-5988436 FORWARD LENGTH=137 | 201606) HSP 1 Score: 62.7734 bits (151), Expect = 2.113e-13 Identity = 41/121 (33.88%), Postives = 62/121 (51.24%), Query Frame = 0 Query: 2 VNATVVLTGVVGRVGTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNINNVWITTGAPFKPAGT-----------KGVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNP 110
+ A ++ G G + F Q+ +GTT V G ISG++PG H IH++G+ N I+TG F P G + NI +G A I K + LSG S++GR +V+H++P
Sbjct: 8 LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGPHFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHADP 128 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_012480.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_012480.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_012480.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_012480.1_cmj_v1 ID=CMJ_chr3_012480.1_cmj_v1; Name=CMJ_chr3_012480.1; organism=Citrus maxima; type=mRNA; length=384bpback to top protein sequence of CMJ_chr3_012480.1_cmj_v1 >CMJ_chr3_012480.1_cmj_v1 ID=CMJ_chr3_012480.1_cmj_v1; Name=CMJ_chr3_012480.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=128bpback to top mRNA from alignment at chr3:30699361..30700622+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1262bp; location=Sequence derived from: chr3:30699361..30700622+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:30699361..30700622+ >CMJ_chr3_012480.1_cmj_v1 ID=CMJ_chr3_012480.1_cmj_v1; Name=CMJ_chr3_012480.1; organism=Citrus maxima; type=CDS; length=384bp; location=Sequence derived from: chr3:30699361..30700622+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|