g14647.t1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of g14647.t1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067G8L1|A0A067G8L1_CITSI (Transcription initiation factor IIB OS=Citrus sinensis OX=2711 GN=CISIN_1g021438mg PE=3 SV=1) HSP 1 Score: 641.343 bits (1653), Expect = 0.000e+0 Identity = 309/312 (99.04%), Postives = 310/312 (99.36%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNLKL 312
MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIF+NESSDHDPVRVGGPLNPLLS GGLSTVIAKPTAGGSTELLSGSLGKLQAR SHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNLKL
Sbjct: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFANESSDHDPVRVGGPLNPLLSGGGLSTVIAKPTAGGSTELLSGSLGKLQARSSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNLKL 312
BLAST of g14647.t1 vs. ExPASy TrEMBL (2024)
Match: tr|V4TML9|V4TML9_CITCL (Transcription initiation factor IIB OS=Citrus clementina OX=85681 GN=CICLE_v10021272mg PE=3 SV=1) HSP 1 Score: 640.573 bits (1651), Expect = 0.000e+0 Identity = 308/312 (98.72%), Postives = 310/312 (99.36%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNLKL 312
MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIF+NESSDHDPVRVGGPLNPLLS GGLSTVIAKPTAGGSTELLSGSLGKLQAR SHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEED+KNLKL
Sbjct: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFANESSDHDPVRVGGPLNPLLSGGGLSTVIAKPTAGGSTELLSGSLGKLQARSSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDMKNLKL 312
BLAST of g14647.t1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A835ML29|A0A835ML29_9ROSI (Transcription initiation factor IIB OS=Salix dunnii OX=1413687 GN=SADUNF_Sadunf15G0060000 PE=3 SV=1) HSP 1 Score: 561.607 bits (1446), Expect = 0.000e+0 Identity = 266/310 (85.81%), Postives = 290/310 (93.55%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
M DSYC DCKRLTE+VFDHSAGDTICSECGL+LEA+SVDE+SEWR FSNESSDHDP RVGGPLNPLL+DGGLST I+K T+GGS ELLSGSLGK Q+RG++PDRNLIQAFKSISAM+DRLGLVTTIKDRANEIYKKVEDQKPL+GRNQ+AI+AACLYIACRQENK RTVKE CSV G TKKEIGRAKEFIVKHLE EMGQS+EMGTIHA+DYLRRFCSNLGMTNQAVKAA EAVQKSE+LDIRRSPIS+AAAVIYIITQL++D KPLK+IS+VT+VAEGTIKN YKDL PHLA+IIP WFA EEDIKNL
Sbjct: 1 MEDSYCPDCKRLTEIVFDHSAGDTICSECGLILEAHSVDESSEWRTFSNESSDHDPNRVGGPLNPLLADGGLSTTISK-TSGGSNELLSGSLGKWQSRGANPDRNLIQAFKSISAMADRLGLVTTIKDRANEIYKKVEDQKPLKGRNQDAILAACLYIACRQENKARTVKEICSVVTGATKKEIGRAKEFIVKHLEVEMGQSMEMGTIHAADYLRRFCSNLGMTNQAVKAAHEAVQKSEELDIRRSPISIAAAVIYIITQLTDDKKPLKDISVVTQVAEGTIKNSYKDLSPHLAQIIPSWFAKEEDIKNL 309
BLAST of g14647.t1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9Q0SSR2|A0A9Q0SSR2_9ROSI (Transcription initiation factor IIB OS=Salix koriyanagi OX=2511006 GN=OIU74_016716 PE=3 SV=1) HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0 Identity = 265/310 (85.48%), Postives = 288/310 (92.90%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
M DSYC DCKRLTE+VFDHSAGDTICSECGL+LEA+SVDETSEWR FSNESSDHDP RVGGPLNPLL+DGGLST I+K T+GGS EL SGSLGK Q+RG++PDRNLIQAFKSIS M+DRLGLVTTIKDRANEIYKKVEDQKPL+GRNQ+AI+AACLYIACRQENK RTVKE CSV G TKKEIGRAKEFIVKHLE EMGQS+EMGTIHA+DYLRRFCSNLGMTNQAVKAA EAVQKSE+LDIRRSPIS+AAAVIYIITQLS+D KPLK+IS+VT+VAEGTIKN YKDL PHL++IIP WFA EEDIKNL
Sbjct: 1 MEDSYCPDCKRLTEIVFDHSAGDTICSECGLILEAHSVDETSEWRTFSNESSDHDPNRVGGPLNPLLADGGLSTTISK-TSGGSNELFSGSLGKWQSRGANPDRNLIQAFKSISVMADRLGLVTTIKDRANEIYKKVEDQKPLKGRNQDAILAACLYIACRQENKARTVKEICSVVTGATKKEIGRAKEFIVKHLEVEMGQSMEMGTIHAADYLRRFCSNLGMTNQAVKAAHEAVQKSEELDIRRSPISIAAAVIYIITQLSDDKKPLKDISVVTQVAEGTIKNAYKDLSPHLSQIIPSWFAKEEDIKNL 309
BLAST of g14647.t1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6N2LIA6|A0A6N2LIA6_SALVM (Transcription initiation factor IIB OS=Salix viminalis OX=40686 GN=SVIM_LOCUS229035 PE=3 SV=1) HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0 Identity = 263/313 (84.03%), Postives = 287/313 (91.69%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIR---RSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
M DSYC DCKRLTE+VFDHSAGDTICSECGL+LEA+SVDETSEWR FSNESSDHDP RVGGPLNPLL+DGGLST I+K T+GGS EL SGSLGK Q+RG++PDRNL+QAFKSISAM+DRLGLVTTIKDRANEIYKKVEDQKPL+GRNQ+AI+AACLYIACRQENK RTVKE CSV G TKKEIGRAKEFIVKHLE EMGQS+EMGTIHA+DYLRRFCSNLGMTNQAVKAA EAVQKSE+LDIR PIS+AAAVIYIITQLS+D KPLK+IS+VT+VAEGTIKN YKDL PHL++IIP WFA EEDIKNL
Sbjct: 1 MEDSYCPDCKRLTEIVFDHSAGDTICSECGLILEAHSVDETSEWRTFSNESSDHDPNRVGGPLNPLLADGGLSTTISK-TSGGSNELFSGSLGKWQSRGANPDRNLLQAFKSISAMADRLGLVTTIKDRANEIYKKVEDQKPLKGRNQDAILAACLYIACRQENKARTVKEICSVVTGATKKEIGRAKEFIVKHLEVEMGQSMEMGTIHAADYLRRFCSNLGMTNQAVKAAHEAVQKSEELDIRYYPEEPISIAAAVIYIITQLSDDKKPLKDISVVTQVAEGTIKNAYKDLSPHLSQIIPIWFAKEEDIKNL 312
BLAST of g14647.t1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8P8M9|A0A8B8P8M9_9MYRT (Transcription initiation factor IIB OS=Rhodamnia argentea OX=178133 GN=LOC115741443 PE=3 SV=1) HSP 1 Score: 533.872 bits (1374), Expect = 0.000e+0 Identity = 252/310 (81.29%), Postives = 281/310 (90.65%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
MAD++C DC + TEVVFDH+AGDTICSECGLVLEA+S+DETSEWR F+NES+D+DPVRVGGP NPLL+DGGLSTVI+KP G S E L+ SLGK Q RG++PDRNLIQAFKSI+ MSDRLGLVTTIKDRANEIYKKVEDQKPL+GRN +AI+AACLYIACRQENK RTVKE CSVANG TKKEIGRAKEFIVK LE EMGQSVEMG IHA+DY+RRFCSNLGMTNQ VKAAQE V KSE+LDIRRSPIS+AAAVIYIITQLS+D KPLK+IS+ TRVAEGTIKN YKDL+PHL++IIP WFA EED+KNL
Sbjct: 1 MADTFCRDCNKQTEVVFDHAAGDTICSECGLVLEAHSIDETSEWRTFANESNDNDPVRVGGPYNPLLTDGGLSTVISKPN-GSSGEFLNSSLGKWQGRGANPDRNLIQAFKSIAIMSDRLGLVTTIKDRANEIYKKVEDQKPLKGRNLDAILAACLYIACRQENKARTVKEICSVANGATKKEIGRAKEFIVKLLEGEMGQSVEMGAIHAADYMRRFCSNLGMTNQEVKAAQEVVLKSEELDIRRSPISIAAAVIYIITQLSSDKKPLKDISVATRVAEGTIKNSYKDLYPHLSKIIPSWFAKEEDLKNL 309
BLAST of g14647.t1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39S3C8|A0AA39S3C8_ACESA (Transcription initiation factor IIB OS=Acer saccharum OX=4024 GN=LWI29_027932 PE=3 SV=1) HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0 Identity = 257/317 (81.07%), Postives = 283/317 (89.27%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTI-----KDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNLKL 312
MAD +C DC R EVVFDHS GDTICSECGLVLE++SVDETSEWR F+NES+D DP RVGG NPLL+ GGL+T+I+ GGS EL+SGS+GK Q+R S+PD++LIQAF +ISAMSDR+ + I KDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSV NGTTKKEIGRAKE IVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGM+NQAVKAAQEAVQKSE+LDIRRSPISVAAAVIYIITQLSNDTKPLK+IS+VTRVAEGTIKN YKDL PHL+ IIPDWFANEEDIK+L++
Sbjct: 1 MADLFCRDCNRQAEVVFDHSTGDTICSECGLVLESHSVDETSEWRTFANESADKDPARVGGSYNPLLTHGGLTTIIS----GGSGELMSGSVGKWQSRSSNPDKHLIQAFSAISAMSDRVLICNGISNFDCKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVVNGTTKKEIGRAKELIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMSNQAVKAAQEAVQKSEELDIRRSPISVAAAVIYIITQLSNDTKPLKDISVVTRVAEGTIKNSYKDLHPHLSHIIPDWFANEEDIKSLRI 313
BLAST of g14647.t1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7H0N9|A0A5C7H0N9_9ROSI (Transcription initiation factor IIB OS=Acer yangbiense OX=1000413 GN=EZV62_022915 PE=3 SV=1) HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0 Identity = 259/315 (82.22%), Postives = 284/315 (90.16%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVK---EFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNLKL 312
MAD +C DC R EVVFDHSAGDTICSECGLVLE++SVD TSEWR F+NES+D +P RVGGP NPLL+ GGL+TVI+ GGS EL+SG +GK Q+R S+PD++LIQAF +ISAM LGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVK EFCSV NGTTKK+IGRAKE IVK LEAEMGQSVEMGTIHASDYLRRFCSNLGM+NQAVKAAQEAVQKSE+LDIRRSPISVAAAVIYIITQLSNDTKPLK+IS+VTRVAEGTIKN YKDL PHL+RIIPDWFANEEDIK+L++
Sbjct: 1 MADLFCRDCNRQAEVVFDHSAGDTICSECGLVLESHSVDMTSEWRTFANESADKEPARVGGPYNPLLTHGGLTTVIS----GGSGELMSGPVGKWQSRSSNPDKHLIQAFSAISAM---LGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKVKLEFCSVVNGTTKKDIGRAKELIVKQLEAEMGQSVEMGTIHASDYLRRFCSNLGMSNQAVKAAQEAVQKSEELDIRRSPISVAAAVIYIITQLSNDTKPLKDISVVTRVAEGTIKNSYKDLHPHLSRIIPDWFANEEDIKSLRI 308
BLAST of g14647.t1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T2X0K2|A0A8T2X0K2_POPDE (Transcription initiation factor IIB OS=Populus deltoides OX=3696 GN=H0E87_025875 PE=3 SV=1) HSP 1 Score: 531.561 bits (1368), Expect = 0.000e+0 Identity = 261/310 (84.19%), Postives = 285/310 (91.94%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
M DSYC DCKRLTE+VFDHSAGDTICSECGL+LEA+SVDETSEWR FSNESSDHDP RVGGPLNPLL+DGGLST I+K T GGS E+LS SLGK Q+RG++PDRN IQAFKSI+AM+DRLGLVTTIKDRANEIYKKVEDQKPL+GRNQ+AI+AACLYIACRQENK RTVKE CSV NG TKKEIGRAKEFIVKHLE EMG S+EMGTIHA+DYLRRFCSNLGMTNQAVKAA EAVQKSE+LDIRRSPIS+AA VIYII QLS+D KPLK+IS+VT+VAEGTIKN YKDL PHL++IIP WFA EEDIKNL
Sbjct: 23 MEDSYCPDCKRLTEIVFDHSAGDTICSECGLILEAHSVDETSEWRTFSNESSDHDPNRVGGPLNPLLADGGLSTTISK-TNGGSNEVLSCSLGKWQSRGANPDRNRIQAFKSIAAMADRLGLVTTIKDRANEIYKKVEDQKPLKGRNQDAILAACLYIACRQENKARTVKEICSVVNGATKKEIGRAKEFIVKHLEVEMGHSMEMGTIHAADYLRRFCSNLGMTNQAVKAAHEAVQKSEELDIRRSPISIAAVVIYIIIQLSDDKKPLKDISVVTQVAEGTIKNSYKDLSPHLSQIIPSWFAKEEDIKNL 331
BLAST of g14647.t1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A218VY43|A0A218VY43_PUNGR (Transcription initiation factor IIB OS=Punica granatum OX=22663 GN=LOC116213493 PE=3 SV=1) HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0 Identity = 253/310 (81.61%), Postives = 281/310 (90.65%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
MAD+YC DCK+ TEVV DH+AGDTICSECGLVLEA+S+DETSEWR F+NES+D+DPVRVGGP NPLL+DGGLSTVI+KP G S E L+ SLGK Q RG++PDRNLIQAFKSI+ MSDRLGLVTTIKDRANEIYKKVEDQKPL+GRN +AI+AACLYIACRQENK RTVKE CSVANG TKKEIGRAKEFIVK LE EMG SVEMGTIHA DY+RRFCSNLGMTNQ VKAAQE VQK+EDLDIRRSPIS+AAAVIYIITQLS+D KPLK+ISI TRVAEGTIKN YKDL+PHL+R+IP W+A EE++KNL
Sbjct: 1 MADTYCKDCKKYTEVVSDHAAGDTICSECGLVLEAHSIDETSEWRTFANESNDNDPVRVGGPYNPLLTDGGLSTVISKPN-GSSGEFLNSSLGKWQGRGANPDRNLIQAFKSIAIMSDRLGLVTTIKDRANEIYKKVEDQKPLKGRNLDAILAACLYIACRQENKARTVKEICSVANGATKKEIGRAKEFIVKLLEGEMG-SVEMGTIHAGDYMRRFCSNLGMTNQEVKAAQEVVQKAEDLDIRRSPISIAAAVIYIITQLSDDKKPLKDISIATRVAEGTIKNSYKDLYPHLSRLIPSWYAKEEELKNL 308
BLAST of g14647.t1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P48513|TF2B_SOYBN (Transcription initiation factor IIB OS=Glycine max OX=3847 GN=TFIIB1 PE=2 SV=1) HSP 1 Score: 515.768 bits (1327), Expect = 0.000e+0 Identity = 239/310 (77.10%), Postives = 276/310 (89.03%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
M+D++C+DCKR TEVVFDHSAGDT+CSECGLVLE++S+DETSEWR F+NES D+DP RVGGP NPLL+DGGLSTVIAKP GG E LS SLG+ Q RGS+PDR LIQAFK+I+ MSDRLGLV TIKDRANEIYK+VEDQK RGRNQ+A++AACLYIACRQE+KPRTVKE CSVANG TKKEIGRAKE+IVK L E G +VEMGTIHA D++RRFCSNL M NQAVKAAQEAVQKSE+ DIRRSPIS+AAAVIYIITQLS+D KPLK+IS+ T VAEGTI+N YKDL+PH+++IIP+W+A EED+KNL
Sbjct: 1 MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVGGPSNPLLTDGGLSTVIAKPNGGGGGEFLSSSLGRWQNRGSNPDRALIQAFKTIATMSDRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLENGNAVEMGTIHAGDFMRRFCSNLCMNNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNL 310
BLAST of g14647.t1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8W0W3|TF2B_ORYSJ (Transcription initiation factor IIB OS=Oryza sativa subsp. japonica OX=39947 GN=TFIIB PE=1 SV=1) HSP 1 Score: 508.834 bits (1309), Expect = 0.000e+0 Identity = 239/310 (77.10%), Postives = 277/310 (89.35%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
M+DS+C DCK+ TEV FDHSAGDT+C+ECGLVLEA+SVDETSEWR F+NESSD+DPVRVGGP NPLL+DGGLSTVIAKP G E LS SLG+ Q RGS+PDR+LI AF++I+ M+DRLGLV TIKDRANEIYKKVED K +RGRNQ+AI+AACLYIACRQE++PRTVKE CSVANG TKKEIGRAKEFIVK LE EMGQS+EMGTIHA D+LRRFCS LGM NQAVKAAQEAVQ+SE+LDIRRSPIS+AAAVIY+ITQLS+D KPLK+IS+ T VAEGTI+N YKDL+P+ +R+IP+ +A EED+KNL
Sbjct: 1 MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVGGPTNPLLTDGGLSTVIAKPN-GAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLGLVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNL 309
BLAST of g14647.t1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SS44|TF2B2_ARATH (Transcription initiation factor IIB-2 OS=Arabidopsis thaliana OX=3702 GN=TFIIB2 PE=2 SV=1) HSP 1 Score: 508.449 bits (1308), Expect = 0.000e+0 Identity = 235/311 (75.56%), Postives = 277/311 (89.07%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNLK 311
M+D++C+DCKR TEVVFDHSAGDT+CSECGLVLE++S+DETSEWR F+NES D+DPVRVGGP NPLL+DGGL+TVI+KP G S + LS SLG+ Q RGS+PDR LI AFK+I+ M+DRLGLV TIKDRANEIYK+VEDQK RGRNQ+A++AACLYIACRQE+KPRTVKE CSVANG TKKEIGRAKE+IVK L E GQ VEMGTIHA D++RRFCSNLGMTNQ VKAAQE+VQKSE+ DIRRSPIS+AAAVIYIITQLS++ KPL++IS+ T VAEGTI+N YKDL+PHL++IIP W+A EED+KNL+
Sbjct: 1 MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPTNPLLADGGLTTVISKPN-GSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWYAKEEDLKNLQ 310
BLAST of g14647.t1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P48512|TF2B1_ARATH (Transcription initiation factor IIB-1 OS=Arabidopsis thaliana OX=3702 GN=TFIIB1 PE=1 SV=1) HSP 1 Score: 474.552 bits (1220), Expect = 4.332e-169 Identity = 221/310 (71.29%), Postives = 264/310 (85.16%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
M+D+YC DCK+ TE+V DHSAGDT+CSECGLVLE++S+DETSEWR F+NESS+ DP RVGGP NPLL+D L+TVIAKP G S + LS SLG+ Q R S+ DR LIQAFK+I+ MS+RLGLV TIKDRANE+YK++EDQK RGRNQ+A+ AACLYIACRQE+KPRT+KE C +ANG TKKEIGRAK++IVK L E GQSV++GTIHA D++RRFCSNL M+N AVKAAQEAVQKSE+ DIRRSPIS+AA VIYIITQLS+D K LK+IS T VAEGTI+N YKDL+PHL++I P W+A EED+KNL
Sbjct: 1 MSDAYCTDCKKETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVGGPTNPLLADSALTTVIAKPN-GSSGDFLSSSLGRWQNRNSNSDRGLIQAFKTIATMSERLGLVATIKDRANELYKRLEDQKSSRGRNQDALYAACLYIACRQEDKPRTIKEICVIANGATKKEIGRAKDYIVKTLGLEPGQSVDLGTIHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNL 309
BLAST of g14647.t1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P29052|TF2B_DROME (Transcription initiation factor IIB OS=Drosophila melanogaster OX=7227 GN=TfIIB PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.171e-81 Identity = 139/300 (46.33%), Postives = 188/300 (62.67%), Query Frame = 0 Query: 13 TEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDI--RRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
+ ++ D+ AGD ICSECGLV+ +D SEWR FSNE S DP RVGGP NPLLS G LST+I T S + + + S DR+LI AFK IS+M+DR+ L TI DRAN ++K+V D K L+GR+ +A +ACLYIACRQE PRT KE C+V+ +KKEIGR + +K LE SV++ I +D++ RFC+NL + N +AA +K+ ++DI RSPISVAAA IY+ +Q S + KEI + VA+ TI+ YK ++PH A++ P+ F I L
Sbjct: 20 SPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIGPGTGSASFDAFGAPKYQNRRTMSSSDRSLISAFKEISSMADRINLPKTIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALET----SVDL--ITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEDFKFTTPIDQL 312
BLAST of g14647.t1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LIA6|PBRP2_ARATH (Plant-specific TFIIB-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=PBRP2 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.154e-78 Identity = 136/318 (42.77%), Postives = 190/318 (59.75%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNES--SDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKL----QARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVE---DQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEA-EMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSN-DTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDI 307
M + C DCKR T +V DHS+GDTICSECGLVLEA+ ++ + EWR F+++ SD DP RVG NP L G L T+I KP S+ L + L +H + + QAF+ I M+D L L I RA EI K + + K RG+ AI AA + ACR+ RT+KE VANG KK+I + I + LE+ + S I+ + +RRFCS L ++ + + A EAV+K+E+ DIRR+P SV AA+I++I+ +S + KP++EI IV V E TIKN KD++P+ +IIP+W+A E DI
Sbjct: 1 MEEETCLDCKRPTIMVVDHSSGDTICSECGLVLEAHIIEYSQEWRTFASDDNHSDRDPNRVGAATNPFLKSGDLVTIIEKPKETASSVLSKDDISTLFRAHNQVKNHEEDLIKQAFEEIQRMTDALDLDIVINSRACEIVSKYDGHANTKLRRGKKLNAICAASVSTACRELQLSRTLKEIAEVANGVDKKDIRKESLVIKRVLESHQTSVSASQAIINTGELVRRFCSKLDISQREIMAIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRKPIREIGIVAEVVENTIKNSVKDMYPYALKIIPNWYACESDI 318
BLAST of g14647.t1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P29054|TF2B_XENLA (Transcription initiation factor IIB OS=Xenopus laevis OX=8355 GN=gtf2b PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.323e-76 Identity = 132/298 (44.30%), Postives = 181/298 (60.74%), Query Frame = 0 Query: 15 VVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDI--RRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
+V D+ AGD ICSECGLV+ +D SEWR FSN+ + DP RVG NPLLS G L+T+I K T S + S + + S DR ++ AFK I+ MSDR+ L I DR N ++K+V +QK L+GR+ +AI +ACLYIACRQE PRT KE C+V+ +KKEIGR + I+K LE + I D++ RFCSNLG+T Q AA +K+ +LD+ RSPISVAAA IY+ +Q S + + KEI + VA+ TI+ Y+ ++P + P F + + L
Sbjct: 23 LVEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNDKAAADPSRVGDAQNPLLSGGDLTTMIGKGTGSASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITNMSDRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKALE------TNVDLITTGDFMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPADFKFDTPVDKL 313
BLAST of g14647.t1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P62916|TF2B_RAT (Transcription initiation factor IIB OS=Rattus norvegicus OX=10116 GN=Gtf2b PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 1.168e-75 Identity = 132/298 (44.30%), Postives = 181/298 (60.74%), Query Frame = 0 Query: 15 VVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDI--RRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
+V D+ AGD IC ECGLV+ +D SEWR FSN+ + DP RVG NPLLSDG LST+I K T S + S + + S DR ++ AFK I+ M+DR+ L I DR N ++K+V +QK L+GR +AI +ACLYIACRQE PRT KE C+V+ +KKEIGR + I+K LE SV++ I D++ RFCSNL + Q AA +K+ +LD+ RSPISVAAA IY+ +Q S + + KEI + VA+ TI+ Y+ ++P + P F + + L
Sbjct: 23 LVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKATKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKALET----SVDL--ITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPSDFKFDTPVDKL 313
BLAST of g14647.t1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P62915|TF2B_MOUSE (Transcription initiation factor IIB OS=Mus musculus OX=10090 GN=Gtf2b PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 1.168e-75 Identity = 132/298 (44.30%), Postives = 181/298 (60.74%), Query Frame = 0 Query: 15 VVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDI--RRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
+V D+ AGD IC ECGLV+ +D SEWR FSN+ + DP RVG NPLLSDG LST+I K T S + S + + S DR ++ AFK I+ M+DR+ L I DR N ++K+V +QK L+GR +AI +ACLYIACRQE PRT KE C+V+ +KKEIGR + I+K LE SV++ I D++ RFCSNL + Q AA +K+ +LD+ RSPISVAAA IY+ +Q S + + KEI + VA+ TI+ Y+ ++P + P F + + L
Sbjct: 23 LVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKATKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKALET----SVDL--ITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPSDFKFDTPVDKL 313
BLAST of g14647.t1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5R886|TF2B_PONAB (Transcription initiation factor IIB OS=Pongo abelii OX=9601 GN=GTF2B PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.532e-75 Identity = 132/298 (44.30%), Postives = 181/298 (60.74%), Query Frame = 0 Query: 15 VVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDI--RRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
+V D+ AGD IC ECGLV+ +D SEWR FSN+ + DP RVG NPLLSDG LST+I K T S + S + + S DR ++ AFK I+ M+DR+ L I DR N ++K+V +QK L+GR +AI +ACLYIACRQE PRT KE C+V+ +KKEIGR + I+K LE SV++ I D++ RFCSNL + Q AA +K+ +LD+ RSPISVAAA IY+ +Q S + + KEI + VA+ TI+ Y+ ++P + P F + + L
Sbjct: 23 LVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKATKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKALET----SVDL--ITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPTDFKFDTPVDKL 313
BLAST of g14647.t1 vs. Araport11
Match: | (Symbols: AtTFIIB2, TFIIB2 | transcription factor IIB 2 | chr3:3199907-3201642 FORWARD LENGTH=312) HSP 1 Score: 508.449 bits (1308), Expect = 0.000e+0 Identity = 235/311 (75.56%), Postives = 277/311 (89.07%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNLK 311
M+D++C+DCKR TEVVFDHSAGDT+CSECGLVLE++S+DETSEWR F+NES D+DPVRVGGP NPLL+DGGL+TVI+KP G S + LS SLG+ Q RGS+PDR LI AFK+I+ M+DRLGLV TIKDRANEIYK+VEDQK RGRNQ+A++AACLYIACRQE+KPRTVKE CSVANG TKKEIGRAKE+IVK L E GQ VEMGTIHA D++RRFCSNLGMTNQ VKAAQE+VQKSE+ DIRRSPIS+AAAVIYIITQLS++ KPL++IS+ T VAEGTI+N YKDL+PHL++IIP W+A EED+KNL+
Sbjct: 1 MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPTNPLLADGGLTTVISKPN-GSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWYAKEEDLKNLQ 310
BLAST of g14647.t1 vs. Araport11
Match: | (Symbols: AtTFIIB1, TFIIB, TFIIB1 | transcription factor IIB, transcription factor IIB 1 | chr2:17355555-17357400 REVERSE LENGTH=312) HSP 1 Score: 474.552 bits (1220), Expect = 4.539e-170 Identity = 221/310 (71.29%), Postives = 264/310 (85.16%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
M+D+YC DCK+ TE+V DHSAGDT+CSECGLVLE++S+DETSEWR F+NESS+ DP RVGGP NPLL+D L+TVIAKP G S + LS SLG+ Q R S+ DR LIQAFK+I+ MS+RLGLV TIKDRANE+YK++EDQK RGRNQ+A+ AACLYIACRQE+KPRT+KE C +ANG TKKEIGRAK++IVK L E GQSV++GTIHA D++RRFCSNL M+N AVKAAQEAVQKSE+ DIRRSPIS+AA VIYIITQLS+D K LK+IS T VAEGTI+N YKDL+PHL++I P W+A EED+KNL
Sbjct: 1 MSDAYCTDCKKETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVGGPTNPLLADSALTTVIAKPN-GSSGDFLSSSLGRWQNRNSNSDRGLIQAFKTIATMSERLGLVATIKDRANELYKRLEDQKSSRGRNQDALYAACLYIACRQEDKPRTIKEICVIANGATKKEIGRAKDYIVKTLGLEPGQSVDLGTIHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNL 309
BLAST of g14647.t1 vs. Araport11
Match: | (Symbols: pBRP2 | plant-specific TFIIB-related protein 2 | chr3:11282407-11283524 REVERSE LENGTH=336) HSP 1 Score: 244.973 bits (624), Expect = 3.286e-79 Identity = 136/318 (42.77%), Postives = 190/318 (59.75%), Query Frame = 0 Query: 1 MADSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNES--SDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKL----QARGSHPDRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVE---DQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEA-EMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDIRRSPISVAAAVIYIITQLSN-DTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDI 307
M + C DCKR T +V DHS+GDTICSECGLVLEA+ ++ + EWR F+++ SD DP RVG NP L G L T+I KP S+ L + L +H + + QAF+ I M+D L L I RA EI K + + K RG+ AI AA + ACR+ RT+KE VANG KK+I + I + LE+ + S I+ + +RRFCS L ++ + + A EAV+K+E+ DIRR+P SV AA+I++I+ +S + KP++EI IV V E TIKN KD++P+ +IIP+W+A E DI
Sbjct: 1 MEEETCLDCKRPTIMVVDHSSGDTICSECGLVLEAHIIEYSQEWRTFASDDNHSDRDPNRVGAATNPFLKSGDLVTIIEKPKETASSVLSKDDISTLFRAHNQVKNHEEDLIKQAFEEIQRMTDALDLDIVINSRACEIVSKYDGHANTKLRRGKKLNAICAASVSTACRELQLSRTLKEIAEVANGVDKKDIRKESLVIKRVLESHQTSVSASQAIINTGELVRRFCSKLDISQREIMAIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRKPIREIGIVAEVVENTIKNSVKDMYPYALKIIPNWYACESDI 318
BLAST of g14647.t1 vs. Araport11
Match: | (Symbols: BRP4 | | chr3:21226839-21228475 REVERSE LENGTH=362) HSP 1 Score: 147.517 bits (371), Expect = 2.521e-41 Identity = 113/365 (30.96%), Postives = 167/365 (45.75%), Query Frame = 0 Query: 6 CADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAK-----------------------PTAGGSTELLSGS---------------------------LGKLQARGSHP------DRNLIQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDI----RRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIPDWFANEEDIKNL 310
C CK++ VV DH T C CGL + + + S +++D VR+ P N LLS+ LS V + P + + +L++GS LG LQ P N + SI A+S+ L L TIK +ANEI+K VE RG+ + + AAC+YIACR + RT++E AN + +I FI + LE + +I +++++RFCS + ++ A +S D RR+P+SVAA ++Y+I +LS + LK + T VAE TIK Y DL+P+L I+P WFAN D+KNL
Sbjct: 9 CRRCKQI-NVVTDHVTRRTRCFGCGLEFKYRPIGDLSP-------VAENDTVRLPDPTNTLLSNTDLSIVTTEHKNGSFDDSLSLNLGNSSKPRLDPVSIATAKLMNGSSNDFLSLGTSQNSETITASSDEFLFSDLGHLQKFSFDPLSMASTKPNKALSIVSIEAISNGLKLPATIKGQANEIFKVVESYA--RGKERNVLFAACIYIACRDNDMTRTMREISRFANKASISDISETVGFIAEKLEINKNWYM---SIETANFIKRFCSIFRL-DKEAVEAALEAAESYDYMTNGCSRRAPVSVAAGIVYVIARLSYEKHLLKGLIEATGVAENTIKGTYGDLYPNLPTIVPTWFANANDLKNL 359
BLAST of g14647.t1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:6587521-6588069 FORWARD LENGTH=182) HSP 1 Score: 86.2705 bits (212), Expect = 5.528e-20 Identity = 66/193 (34.20%), Postives = 99/193 (51.30%), Query Frame = 0 Query: 3 DSYCADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPLNPLLSDGGLSTVIAKPTAGGSTELLSGSLGKLQAR--GSHPDRNLIQ-AFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLR-GRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFI 191
D C +CKR TE V ++ GDTIC ECG V+E +D+ G NP L G L T+I K + G + L+ L + Q + + ++I+ A+ I M++ LGL I + A +I K+ D+K LR G++ + AA + ACRQ N P+T+KE +VAN KEI +A + +
Sbjct: 4 DGICLECKRPTETVVNYKNGDTICIECGHVIENNIIDDLD-----------------GASTNPNLKSGHLPTIIFKLS--GKSSSLASKLRRTQNEMIKNKQEEDVIKIAYAEIERMTEALGLTFGISNTACKILSKL-DKKNLRGGKSLRGLCAASVSRACRQVNIPKTLKEISAVAN-VDMKEINKAVKLL 175
BLAST of g14647.t1 vs. Araport11
Match: | (Symbols: PBRP, ATPBRP | plant-specific TFIIB-related protein | chr4:17283283-17285527 REVERSE LENGTH=503) HSP 1 Score: 88.5817 bits (218), Expect = 2.800e-19 Identity = 63/198 (31.82%), Postives = 108/198 (54.55%), Query Frame = 0 Query: 107 IQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDI------RRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAEGTIKNVYKDLFPHLARIIP 298
++A+ I ++ LGL I + A ++++ LR R+ EA+ ACL A R+ +PRT++E S+A +KEIG+ + + + L+ + Q + +I S ++ RFC+ L Q K+AQE ++ I RR+PIS++AA IY+ QL + K EI +T + E T++ VYK+L + ++P
Sbjct: 131 LRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQ--LSQPINSNSI--SVHMPRFCTLL----QLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 319
BLAST of g14647.t1 vs. Araport11
Match: | (Symbols: PBRP, ATPBRP | plant-specific TFIIB-related protein | chr4:17283600-17285527 REVERSE LENGTH=369) HSP 1 Score: 77.0258 bits (188), Expect = 1.324e-15 Identity = 56/179 (31.28%), Postives = 96/179 (53.63%), Query Frame = 0 Query: 107 IQAFKSISAMSDRLGLVTTIKDRANEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEFCSVANGTTKKEIGRAKEFIVKHLEAEMGQSVEMGTIHASDYLRRFCSNLGMTNQAVKAAQEAVQKSEDLDI------RRSPISVAAAVIYIITQLSNDTKPLKEISIVTRVAE 279
++A+ I ++ LGL I + A ++++ LR R+ EA+ ACL A R+ +PRT++E S+A +KEIG+ + + + L ++ Q + +I S ++ RFC+ L + K+AQE ++ I RR+PIS++AA IY+ QL + K EI +T + E
Sbjct: 131 LRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEAL--QLSQPINSNSI--SVHMPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTE 300
BLAST of g14647.t1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:15709474-15709925 FORWARD LENGTH=119) HSP 1 Score: 48.521 bits (114), Expect = 4.141e-7 Identity = 27/88 (30.68%), Postives = 46/88 (52.27%), Query Frame = 0 Query: 6 CADCKRLTEVVFDHSAGDTICSECGLVLEAYSVDETSEWRIFSNESSDHDPVRVGGPL-----NPLLSDGGLSTVIAKPTAGGSTELL 88
C DCK+ T+ V D+ +GDTIC+ECGL+L+++ + ++ + I S +VG + NP +S ++ P+ LL
Sbjct: 6 CLDCKKRTDTVIDYRSGDTICTECGLILDSHYIVDSFDRNISYMTPSIRTKHKVGTNVLIKNPNPKDKASSISFRVSSPSCCSHYALL 93 The following BLAST results are available for this feature:
BLAST of g14647.t1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-16 (Blastp of Citrus australasica cv. Rainbow v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of g14647.t1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-16 (Blastp of Citrus australasica cv. Rainbow v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of g14647.t1 vs. Araport11
Analysis Date: 2024-08-16 (Blastp of Citrus australasica cv. Rainbow v1.0 proteins vs Araport11) Total hits: 8 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus australasica cv. Rainbow v1.0 proteins
Date Performed: 2024-08-16 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCitAust.Rainbow.1.0.H2.g14647.t1 ID=drCitAust.Rainbow.1.0.H2.g14647.t1; Name=g14647.t1; organism=Citrus australasica; type=mRNA; length=939bpback to top protein sequence of drCitAust.Rainbow.1.0.H2.g14647.t1 >drCitAust.Rainbow.1.0.H2.g14647.t1 ID=drCitAust.Rainbow.1.0.H2.g14647.t1; Name=drCitAust.Rainbow.1.0.H2.g14647.t1; organism=Citrus australasica; type=polypeptide; length=312bpback to top mRNA from alignment at Chr05.H2:2464498..2467924- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3427bp; location=Sequence derived from: Chr05.H2:2464498..2467924- (Citrus australasicaback to top Coding sequence (CDS) from alignment at Chr05.H2:2464498..2467924- >drCitAust.Rainbow.1.0.H2.g14647.t1 ID=drCitAust.Rainbow.1.0.H2.g14647.t1; Name=g14647.t1; organism=Citrus australasica; type=CDS; length=939bp; location=Sequence derived from: Chr05.H2:2464498..2467924- (Citrus australasicaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|