orange1.1g017671m.v1.1, orange1.1g017671m.v1.1_Csinensis_154_v1.1 (mRNA) Citrus sinensis
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match: DHYS_ARATH (Deoxyhypusine synthase OS=Arabidopsis thaliana OX=3702 GN=DHS PE=2 SV=1) HSP 1 Score: 643.654 bits (1659), Expect = 0.000e+0 Identity = 305/368 (82.88%), Postives = 346/368 (94.02%), Query Frame = 1 Query: 1 MEDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEV-IXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVETE 1101
MED+ V +SVHSTVFKESESLEGK KIEGYDFNQGV+Y +L++SM++TGFQASN G+AI+VVNQMLDWRLADE + EDC E E++P +R+SV+CK+FLGFTSNL+SSGVRDT+RYLVQHHMVDV+VTT GG+EEDL+KCLAPTFKGDF+LPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFD+MLKEQ EE + WTPSK++ARLGKEIN+ESSYLYWAYK NIPVFCPGLTDGSLGDMLYFHSFR+ GLIID+VQDIRA+NGEAVHA+P+KTG+IILGGGLPKHHICNANMMRNGADYAVFINT QEFDGSDSGARPDEAVSWGKIRGSAKTVKV+CDATIAFPLLVAETFA++R++ E++
Sbjct: 1 MEDD-RVFSSVHSTVFKESESLEGKCDKIEGYDFNQGVDYPKLMRSMLTTGFQASNLGEAIDVVNQMLDWRLADETTVAEDCSEEEKNPSFRESVKCKIFLGFTSNLVSSGVRDTIRYLVQHHMVDVIVTTTGGVEEDLIKCLAPTFKGDFSLPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDEMLKEQKEENVLWTPSKLLARLGKEINNESSYLYWAYKMNIPVFCPGLTDGSLGDMLYFHSFRTSGLIIDVVQDIRAMNGEAVHANPKKTGMIILGGGLPKHHICNANMMRNGADYAVFINTGQEFDGSDSGARPDEAVSWGKIRGSAKTVKVYCDATIAFPLLVAETFATKRDQTCESK 367
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match: DHYS_BRANA (Deoxyhypusine synthase OS=Brassica napus OX=3708 GN=DHS PE=2 SV=1) HSP 1 Score: 640.573 bits (1651), Expect = 0.000e+0 Identity = 301/366 (82.24%), Postives = 336/366 (91.80%), Query Frame = 1 Query: 1 MEDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXX-XYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVE 1095
ME++ V++SVHSTVFKESESLEGK KIEGYDFNQGVNY +LL+SM++TGFQASN GD I+VVNQML+WRL+DE I + E YR+SV+CK+FLGFTSNL+SSGVR+T+RYLVQHHMVDV+VTT GG+EEDL+KCLAPTFKGDF+LPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQ EE + WTPSK++ARLGKEIN+ESSYLYWAYK NIPVFC GLTDGSLGDMLYFHSFR+ GL+ID+VQDIRA+NGEAVHA+PRKTG+IILGGGLPKHHICNANMMRNGADYAVFINT QEFDGSDSGARPDEAVSWGKIRGSAKTVKV+CDATIAFPLLVAETFAS+R + E
Sbjct: 1 MEED-RVLSSVHSTVFKESESLEGKCDKIEGYDFNQGVNYPKLLRSMLTTGFQASNLGDVIDVVNQMLEWRLSDETIAPEDCSEEEKDPAYRESVKCKIFLGFTSNLVSSGVRETIRYLVQHHMVDVIVTTTGGVEEDLIKCLAPTFKGDFSLPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQKEESVLWTPSKLLARLGKEINNESSYLYWAYKMNIPVFCRGLTDGSLGDMLYFHSFRTSGLVIDVVQDIRAMNGEAVHATPRKTGMIILGGGLPKHHICNANMMRNGADYAVFINTGQEFDGSDSGARPDEAVSWGKIRGSAKTVKVYCDATIAFPLLVAETFASKREQSCE 365
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match: DHYS_DIACA (Deoxyhypusine synthase OS=Dianthus caryophyllus OX=3570 GN=DHS PE=2 SV=1) HSP 1 Score: 629.402 bits (1622), Expect = 0.000e+0 Identity = 305/368 (82.88%), Postives = 335/368 (91.03%), Query Frame = 1 Query: 1 MED-NSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVK-----CLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNK 1086
MED N + +AS HS FK+SE+LEGK KIEGYDFNQGVNYS+LL+S S GFQASN GDAIEVVN MLDW LADE +DC E ERDP++R+SV+CKVFLGFTSNLISSGVRDT+RYLVQHHMVDV+VTT GGIEEDL+K CLAPTFKGDFALPGA LRSKGLNRIGNLLVPNDNYCKFEDWIIPI D+ML+EQ E+I WTPSK+I RLG+EINDESSYLYWA+KNNIPVFCPGLTDGSLGDMLYFHSFR+PGLI+D+VQDIRA+NGEAVHA+PRKTG+IILGGGLPKHHICNANMMRNGADYAVFINTA+EFDGSDSGARPDEA+SWGKI GSAKTVKVHCDATIAFPLLVAETFA++R K
Sbjct: 1 MEDANHDSVASAHSAAFKKSENLEGKSVKIEGYDFNQGVNYSKLLQSFASNGFQASNLGDAIEVVNHMLDWSLADEAPVDDCSEEERDPKFRESVKCKVFLGFTSNLISSGVRDTIRYLVQHHMVDVIVTTTGGIEEDLIKGRSIKCLAPTFKGDFALPGAQLRSKGLNRIGNLLVPNDNYCKFEDWIIPILDKMLEEQISEKILWTPSKLIGRLGREINDESSYLYWAFKNNIPVFCPGLTDGSLGDMLYFHSFRNPGLIVDVVQDIRAVNGEAVHAAPRKTGMIILGGGLPKHHICNANMMRNGADYAVFINTAEEFDGSDSGARPDEAISWGKISGSAKTVKVHCDATIAFPLLVAETFAAKREK 368
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match: DHYS_SENVE (Deoxyhypusine synthase OS=Senecio vernalis OX=93496 GN=DHS1 PE=2 SV=1) HSP 1 Score: 628.632 bits (1620), Expect = 0.000e+0 Identity = 295/361 (81.72%), Postives = 332/361 (91.97%), Query Frame = 1 Query: 13 SNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVE 1095
++VM ++ S VFKESESLEG KI GYDFN G++YSQ+LKSMVSTGFQASN GDAIE VNQMLDWRL+ E + EDC + E++P YR+S++CK+FLGFTSNLISSGVRD +RYLVQHHMVDV+VTT GGIEEDL+KCLA TFKG+F+LPGA LRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQML+EQ + + WTPSK+I RLGKEIN+ESSYLYWAYKN+IPVFCPGLTDGSLGDMLYFH+FR+PGLI+D+VQDIRAIN EAVHA+PRKTG+IILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAK+VKVHCDATIAFPLLVAETFA++R + E
Sbjct: 8 ASVMENLRSVVFKESESLEGTCAKIRGYDFNNGIDYSQILKSMVSTGFQASNLGDAIETVNQMLDWRLSHEQVTEDCSQEEKNPTYRESIKCKIFLGFTSNLISSGVRDIIRYLVQHHMVDVIVTTTGGIEEDLIKCLADTFKGEFSLPGAELRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLEEQKAKNVLWTPSKLIMRLGKEINNESSYLYWAYKNDIPVFCPGLTDGSLGDMLYFHTFRNPGLIVDVVQDIRAINSEAVHANPRKTGMIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKSVKVHCDATIAFPLLVAETFAAKREQSAE 368
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match: DHYS_SOLLC (Deoxyhypusine synthase OS=Solanum lycopersicum OX=4081 GN=DHS PE=2 SV=1) HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0 Identity = 297/369 (80.49%), Postives = 331/369 (89.70%), Query Frame = 1 Query: 16 NVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFR---------SPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVE 1095
++M SV S VFKESE+LEG TKIEGYDFN+GVNY++L+KSMVSTGFQASN GDAI +VNQMLDWRL+ E+ EDC E ERD YR+SV CK+FLGFTSNL+SSGVRDTVRYLVQH MVDVVVTTAGGIEEDL+KCLAPT+KGDF+LPGA LRSKGLNRIGNLLVPNDNYCKFE+WIIP+FDQM +EQ E++ WTPSKVIARLGKEINDE+SYLYWAYKN IPVFCPGLTDGSLGDMLYFHSF+ +PGL+IDIV DIRA+NGEAVHA RKTG+IILGGGLPKHH+CNANMMRNGAD+AVFINTAQEFDGSDSGARPDEAVSWGKIRG AKTVKVHCDATIAFP+LVAETFA++ +F +
Sbjct: 8 SIMDSVRSVVFKESENLEGSCTKIEGYDFNKGVNYAELIKSMVSTGFQASNLGDAIAIVNQMLDWRLSHELPTEDCSEEERDVAYRESVTCKIFLGFTSNLVSSGVRDTVRYLVQHRMVDVVVTTAGGIEEDLIKCLAPTYKGDFSLPGASLRSKGLNRIGNLLVPNDNYCKFENWIIPVFDQMYEEQINEKVLWTPSKVIARLGKEINDETSYLYWAYKNRIPVFCPGLTDGSLGDMLYFHSFKKGDPDNPDLNPGLVIDIVGDIRAMNGEAVHAGLRKTGMIILGGGLPKHHVCNANMMRNGADFAVFINTAQEFDGSDSGARPDEAVSWGKIRGGAKTVKVHCDATIAFPILVAETFAAKSKEFSQ 376
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match: DHYS_TOBAC (Deoxyhypusine synthase OS=Nicotiana tabacum OX=4097 GN=DHS1 PE=2 SV=1) HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0 Identity = 296/372 (79.57%), Postives = 329/372 (88.44%), Query Frame = 1 Query: 1 MEDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFR---------SPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKF 1089
M + NVM SV S VFKESE+LEG TKIEGYDFN+GVNY++L KSM STGFQA+N GDAI++VNQMLDWRL+ E EDC E ERD YR+SV CK+FLGFTSNL+SSGVRDT+RYLVQH MVDVVVTTAGGIEEDL+KCLAPT+KGDF+LPGA LRSKGLNRIGNLLVPNDNYCKFE+WIIPIFDQM +EQ +E++ WTPSKVIARL KEINDE+SYLYWAYKN IPVFCPGLTDGSLGDMLYFHSF+ +PGLIIDIV DIRA+N EAVHA RKTG+IILGGGLPKHH+CNANMMRNGAD+AV+INTAQEFDGSDSGARPDEAVSWGKIRG AKTVKVHCDATIAFP+LVAETFA++R +
Sbjct: 1 MGEALNVMESVRSIVFKESENLEGSATKIEGYDFNKGVNYAELFKSMASTGFQAANLGDAIQIVNQMLDWRLSHEQPMEDCSEEERDVAYRESVTCKIFLGFTSNLVSSGVRDTIRYLVQHRMVDVVVTTAGGIEEDLIKCLAPTYKGDFSLPGAVLRSKGLNRIGNLLVPNDNYCKFENWIIPIFDQMYEEQIKEKVLWTPSKVIARLAKEINDETSYLYWAYKNRIPVFCPGLTDGSLGDMLYFHSFKKGDPDNPDLNPGLIIDIVGDIRAMNSEAVHAGSRKTGMIILGGGLPKHHVCNANMMRNGADFAVYINTAQEFDGSDSGARPDEAVSWGKIRGGAKTVKVHCDATIAFPILVAETFAAKRKEL 372
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match: DHYS_MUSAC (Deoxyhypusine synthase OS=Musa acuminata OX=4641 GN=DHS PE=2 SV=1) HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0 Identity = 268/359 (74.65%), Postives = 311/359 (86.63%), Query Frame = 1 Query: 4 EDNSNVMASVHSTVFKESESLEGKG-TKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASR 1077
+ + + +V S VFK S SLE K +++GYDFN+G + LL S+ STGFQASN GDAI+V+NQM+DWRL+ + EDC E ER+ YR+SV CK+FLGFTSNL+SSG+R+ +R+LVQH MV+V+VTTAGGIEEDL+KCLAPT+KGDF+LPG+YLRSKGLNRIGNLLVPNDNYCKFEDWI+PI DQML EQ E + WTPSKVIARLGKEINDESSYLYWAYKNN+ V+CP LTDGSLGDMLY HS R+PGL+IDIVQDIRA+NGEAVH RKTG+IILGGGLPKHHICNANM RNGADYAV++NTAQEFDGSDSGA PDEA+SWGKI+GSAKT+KVHCDATIAFPLLVA TFA +
Sbjct: 9 QRDRETLDAVRSVVFKPSVSLEEKRFPRVQGYDFNRGCDLIGLLDSISSTGFQASNLGDAIDVINQMIDWRLSHDAPTEDCSEEERNLAYRQSVTCKIFLGFTSNLVSSGIREIIRFLVQHRMVEVLVTTAGGIEEDLIKCLAPTYKGDFSLPGSYLRSKGLNRIGNLLVPNDNYCKFEDWIMPILDQMLLEQTTENVVWTPSKVIARLGKEINDESSYLYWAYKNNVSVYCPALTDGSLGDMLYCHSVRNPGLLIDIVQDIRAMNGEAVHVGLRKTGVIILGGGLPKHHICNANMFRNGADYAVYVNTAQEFDGSDSGAEPDEAISWGKIKGSAKTIKVHCDATIAFPLLVAATFARK 367
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match: HSS1_SENVE (Homospermidine synthase 1 OS=Senecio vernalis OX=93496 GN=HSS1 PE=1 SV=1) HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0 Identity = 268/364 (73.63%), Postives = 310/364 (85.16%), Query Frame = 1 Query: 4 EDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLA-DEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRS--PGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNK 1086
E N + S S VFKESESLEG KI GYDFN G+++S+LLKSMVSTGFQASN GDA+ + NQMLDWRL+ DEV + E + + R+SV+CK+FLGFTSNLISSGVR+T+ YL QH MVDV+VTT GGIEED +KCLA T+KG F+LPGA LRSKGLNRIGNL+VPNDNY KFEDWIIPIFDQML EQ + + WTPS++IARLGKEIN+E+SYLYWAYKNNIPVFCP +TDGS+GDMLYFHS + PGL++DIVQD+ A++ EAVHASP+KTG+IILGGGLPKHHICNANMMRNGAD+AVFINTAQE+DGSDSGARPDEAVSWGKI + K VKVHCDATIAFPLLVAETFA ++ K
Sbjct: 3 ESNKEAIDSARSNVFKESESLEGTCAKIGGYDFNNGIDHSKLLKSMVSTGFQASNLGDAMIITNQMLDWRLSHDEV---PENCSEEEKKNRESVKCKIFLGFTSNLISSGVRETICYLTQHRMVDVLVTTTGGIEEDFIKCLASTYKGKFSLPGADLRSKGLNRIGNLIVPNDNYIKFEDWIIPIFDQMLIEQKTQNVLWTPSRMIARLGKEINNETSYLYWAYKNNIPVFCPSITDGSIGDMLYFHSVSNPGPGLVVDIVQDVIAMDNEAVHASPQKTGIIILGGGLPKHHICNANMMRNGADFAVFINTAQEYDGSDSGARPDEAVSWGKISSTGKAVKVHCDATIAFPLLVAETFAVKKEK 363
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match: HSS2_SENVE (Homospermidine synthase 2 OS=Senecio vernalis OX=93496 PE=1 SV=1) HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0 Identity = 267/364 (73.35%), Postives = 309/364 (84.89%), Query Frame = 1 Query: 4 EDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLA-DEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRS--PGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNK 1086
E N + S S VFKESESLEG KI GYDFN G+++S+LLKSMVSTGFQASN GDA+ + NQML+WRL+ DEV E + + R+SV+CK+FLGFTSNLISSGVR+T+ YL QH MVDV+VTT GGIEED +KCLA T+KG F+LPGA LRSKGLNRIGNL+VPNDNY KFEDWIIPIFDQML EQ + + WTPS++IARLGKEIN+E+SYLYWAYKNNIPVFCP +TDGS+GDMLYFHS + PGL++DIVQD+ A++ EAVHASP+KTG+IILGGGLPKHHICNANMMRNGAD+AVFINTAQE+DGSDSGARPDEAVSWGKI + K VKVHCDATIAFPLLVAETFA ++ K
Sbjct: 3 ESNKEAIDSARSNVFKESESLEGTCAKIGGYDFNNGIDHSKLLKSMVSTGFQASNLGDAMIITNQMLEWRLSHDEV---PEHCSEEEKKNRESVKCKIFLGFTSNLISSGVRETICYLAQHRMVDVLVTTTGGIEEDFIKCLASTYKGKFSLPGADLRSKGLNRIGNLIVPNDNYIKFEDWIIPIFDQMLIEQKTQNVLWTPSRMIARLGKEINNETSYLYWAYKNNIPVFCPSITDGSIGDMLYFHSVSNPGPGLVVDIVQDVIAMDNEAVHASPQKTGIIILGGGLPKHHICNANMMRNGADFAVFINTAQEYDGSDSGARPDEAVSWGKISSTGKAVKVHCDATIAFPLLVAETFAVKKEK 363
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match: HSS1_SENVU (Homospermidine synthase OS=Senecio vulgaris OX=76276 GN=HSS1 PE=1 SV=1) HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0 Identity = 267/364 (73.35%), Postives = 310/364 (85.16%), Query Frame = 1 Query: 4 EDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLA-DEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRS--PGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNK 1086
E N + S S VFKESESLEG KI GYDFN G+++S+LLKSMVSTGFQASN GDA+ + NQML+WRL+ DEV + E + + R+SV+CK+FLGFTSNLISSGVR+T+ YL QH MVDV+VTT GGIEED +KCLA T+KG F+LPGA LRSKGLNRIGNL+VPNDNY KFEDWIIPIFDQML EQ + + WTPS++IARLGKEIN+E+SYLYWAYKNNIPVFCP +TDGS+GDMLYFHS + PGL++DIVQD+ A++ EAVHASP+KTG+IILGGGLPKHHICNANMMRNGAD+AVFINTAQE+DGSDSGARPDEAVSWGKI + K VKVHCDATIAFPLLVAETFA ++ K
Sbjct: 3 ESNKEAIDSARSNVFKESESLEGTCAKIGGYDFNNGIDHSKLLKSMVSTGFQASNLGDAMIITNQMLEWRLSHDEV---PENCSEEEKKNRESVKCKIFLGFTSNLISSGVRETICYLTQHRMVDVLVTTTGGIEEDFIKCLASTYKGKFSLPGADLRSKGLNRIGNLIVPNDNYIKFEDWIIPIFDQMLIEQKTQNVLWTPSRMIARLGKEINNETSYLYWAYKNNIPVFCPSITDGSIGDMLYFHSVSNPGPGLVVDIVQDVIAMDNEAVHASPQKTGIIILGGGLPKHHICNANMMRNGADFAVFINTAQEYDGSDSGARPDEAVSWGKISSTGKAVKVHCDATIAFPLLVAETFAVKKEK 363 The following BLAST results are available for this feature:
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Analysis Date: 2018-06-08 (C. sinensis v1.1 CDS) Total hits: 10 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >orange1.1g017671m.v1.1_Csinensis_154_v1.1 ID=orange1.1g017671m.v1.1_Csinensis_154_v1.1; Name=orange1.1g017671m.v1.1; organism=Citrus sinensis; type=mRNA; length=4110bpback to top mRNA from alignment at scaffold00069:490997..495106- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4110bp; location=Sequence derived from: scaffold00069:490997..495106- (Citrus sinensisback to top Coding sequence (CDS) from alignment at scaffold00069:490997..495106- >orange1.1g017671m.v1.1_Csinensis_154_v1.1 ID=orange1.1g017671m.v1.1_Csinensis_154_v1.1; Name=orange1.1g017671m.v1.1; organism=Citrus sinensis; type=CDS; length=1107bp; location=Sequence derived from: scaffold00069:490997..495106- (Citrus sinensisback to top |