Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
orange1.1g017671m.v1.1 | orange1.1g017671m.v1.1_Csinensis_154_v1.1-protein | Citrus sinensis | polypeptide |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
orange1.1g017671m.v1.1.CDS.7 | orange1.1g017671m.v1.1.CDS.7_Csinensis_154_v1.1 | Citrus sinensis | CDS |
orange1.1g017671m.v1.1.CDS.6 | orange1.1g017671m.v1.1.CDS.6_Csinensis_154_v1.1 | Citrus sinensis | CDS |
orange1.1g017671m.v1.1.CDS.5 | orange1.1g017671m.v1.1.CDS.5_Csinensis_154_v1.1 | Citrus sinensis | CDS |
orange1.1g017671m.v1.1.CDS.4 | orange1.1g017671m.v1.1.CDS.4_Csinensis_154_v1.1 | Citrus sinensis | CDS |
orange1.1g017671m.v1.1.CDS.3 | orange1.1g017671m.v1.1.CDS.3_Csinensis_154_v1.1 | Citrus sinensis | CDS |
orange1.1g017671m.v1.1.CDS.2 | orange1.1g017671m.v1.1.CDS.2_Csinensis_154_v1.1 | Citrus sinensis | CDS |
orange1.1g017671m.v1.1.CDS.1 | orange1.1g017671m.v1.1.CDS.1_Csinensis_154_v1.1 | Citrus sinensis | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
orange1.1g017671m.v1.1.three_prime_UTR.1 | orange1.1g017671m.v1.1.three_prime_UTR.1_Csinensis_154_v1.1 | Citrus sinensis | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
orange1.1g017671m.v1.1.exon.7 | orange1.1g017671m.v1.1.exon.7_Csinensis_154_v1.1 | Citrus sinensis | exon |
orange1.1g017671m.v1.1.exon.6 | orange1.1g017671m.v1.1.exon.6_Csinensis_154_v1.1 | Citrus sinensis | exon |
orange1.1g017671m.v1.1.exon.5 | orange1.1g017671m.v1.1.exon.5_Csinensis_154_v1.1 | Citrus sinensis | exon |
orange1.1g017671m.v1.1.exon.4 | orange1.1g017671m.v1.1.exon.4_Csinensis_154_v1.1 | Citrus sinensis | exon |
orange1.1g017671m.v1.1.exon.3 | orange1.1g017671m.v1.1.exon.3_Csinensis_154_v1.1 | Citrus sinensis | exon |
orange1.1g017671m.v1.1.exon.2 | orange1.1g017671m.v1.1.exon.2_Csinensis_154_v1.1 | Citrus sinensis | exon |
orange1.1g017671m.v1.1.exon.1 | orange1.1g017671m.v1.1.exon.1_Csinensis_154_v1.1 | Citrus sinensis | exon |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
orange1.1g017671m.v1.1.five_prime_UTR.1 | orange1.1g017671m.v1.1.five_prime_UTR.1_Csinensis_154_v1.1 | Citrus sinensis | five_prime_UTR |
Homology
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match:
DHYS_ARATH (Deoxyhypusine synthase OS=Arabidopsis thaliana OX=3702 GN=DHS PE=2 SV=1)
HSP 1 Score: 643.654 bits (1659), Expect = 0.000e+0
Identity = 305/368 (82.88%), Postives = 346/368 (94.02%), Query Frame = 1
Query: 1 MEDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEV-IXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVETE 1101
MED+ V +SVHSTVFKESESLEGK KIEGYDFNQGV+Y +L++SM++TGFQASN G+AI+VVNQMLDWRLADE + EDC E E++P +R+SV+CK+FLGFTSNL+SSGVRDT+RYLVQHHMVDV+VTT GG+EEDL+KCLAPTFKGDF+LPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFD+MLKEQ EE + WTPSK++ARLGKEIN+ESSYLYWAYK NIPVFCPGLTDGSLGDMLYFHSFR+ GLIID+VQDIRA+NGEAVHA+P+KTG+IILGGGLPKHHICNANMMRNGADYAVFINT QEFDGSDSGARPDEAVSWGKIRGSAKTVKV+CDATIAFPLLVAETFA++R++ E++
Sbjct: 1 MEDD-RVFSSVHSTVFKESESLEGKCDKIEGYDFNQGVDYPKLMRSMLTTGFQASNLGEAIDVVNQMLDWRLADETTVAEDCSEEEKNPSFRESVKCKIFLGFTSNLVSSGVRDTIRYLVQHHMVDVIVTTTGGVEEDLIKCLAPTFKGDFSLPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDEMLKEQKEENVLWTPSKLLARLGKEINNESSYLYWAYKMNIPVFCPGLTDGSLGDMLYFHSFRTSGLIIDVVQDIRAMNGEAVHANPKKTGMIILGGGLPKHHICNANMMRNGADYAVFINTGQEFDGSDSGARPDEAVSWGKIRGSAKTVKVYCDATIAFPLLVAETFATKRDQTCESK 367
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match:
DHYS_BRANA (Deoxyhypusine synthase OS=Brassica napus OX=3708 GN=DHS PE=2 SV=1)
HSP 1 Score: 640.573 bits (1651), Expect = 0.000e+0
Identity = 301/366 (82.24%), Postives = 336/366 (91.80%), Query Frame = 1
Query: 1 MEDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXX-XYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVE 1095
ME++ V++SVHSTVFKESESLEGK KIEGYDFNQGVNY +LL+SM++TGFQASN GD I+VVNQML+WRL+DE I + E YR+SV+CK+FLGFTSNL+SSGVR+T+RYLVQHHMVDV+VTT GG+EEDL+KCLAPTFKGDF+LPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQ EE + WTPSK++ARLGKEIN+ESSYLYWAYK NIPVFC GLTDGSLGDMLYFHSFR+ GL+ID+VQDIRA+NGEAVHA+PRKTG+IILGGGLPKHHICNANMMRNGADYAVFINT QEFDGSDSGARPDEAVSWGKIRGSAKTVKV+CDATIAFPLLVAETFAS+R + E
Sbjct: 1 MEED-RVLSSVHSTVFKESESLEGKCDKIEGYDFNQGVNYPKLLRSMLTTGFQASNLGDVIDVVNQMLEWRLSDETIAPEDCSEEEKDPAYRESVKCKIFLGFTSNLVSSGVRETIRYLVQHHMVDVIVTTTGGVEEDLIKCLAPTFKGDFSLPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQKEESVLWTPSKLLARLGKEINNESSYLYWAYKMNIPVFCRGLTDGSLGDMLYFHSFRTSGLVIDVVQDIRAMNGEAVHATPRKTGMIILGGGLPKHHICNANMMRNGADYAVFINTGQEFDGSDSGARPDEAVSWGKIRGSAKTVKVYCDATIAFPLLVAETFASKREQSCE 365
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match:
DHYS_DIACA (Deoxyhypusine synthase OS=Dianthus caryophyllus OX=3570 GN=DHS PE=2 SV=1)
HSP 1 Score: 629.402 bits (1622), Expect = 0.000e+0
Identity = 305/368 (82.88%), Postives = 335/368 (91.03%), Query Frame = 1
Query: 1 MED-NSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVK-----CLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNK 1086
MED N + +AS HS FK+SE+LEGK KIEGYDFNQGVNYS+LL+S S GFQASN GDAIEVVN MLDW LADE +DC E ERDP++R+SV+CKVFLGFTSNLISSGVRDT+RYLVQHHMVDV+VTT GGIEEDL+K CLAPTFKGDFALPGA LRSKGLNRIGNLLVPNDNYCKFEDWIIPI D+ML+EQ E+I WTPSK+I RLG+EINDESSYLYWA+KNNIPVFCPGLTDGSLGDMLYFHSFR+PGLI+D+VQDIRA+NGEAVHA+PRKTG+IILGGGLPKHHICNANMMRNGADYAVFINTA+EFDGSDSGARPDEA+SWGKI GSAKTVKVHCDATIAFPLLVAETFA++R K
Sbjct: 1 MEDANHDSVASAHSAAFKKSENLEGKSVKIEGYDFNQGVNYSKLLQSFASNGFQASNLGDAIEVVNHMLDWSLADEAPVDDCSEEERDPKFRESVKCKVFLGFTSNLISSGVRDTIRYLVQHHMVDVIVTTTGGIEEDLIKGRSIKCLAPTFKGDFALPGAQLRSKGLNRIGNLLVPNDNYCKFEDWIIPILDKMLEEQISEKILWTPSKLIGRLGREINDESSYLYWAFKNNIPVFCPGLTDGSLGDMLYFHSFRNPGLIVDVVQDIRAVNGEAVHAAPRKTGMIILGGGLPKHHICNANMMRNGADYAVFINTAEEFDGSDSGARPDEAISWGKISGSAKTVKVHCDATIAFPLLVAETFAAKREK 368
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match:
DHYS_SENVE (Deoxyhypusine synthase OS=Senecio vernalis OX=93496 GN=DHS1 PE=2 SV=1)
HSP 1 Score: 628.632 bits (1620), Expect = 0.000e+0
Identity = 295/361 (81.72%), Postives = 332/361 (91.97%), Query Frame = 1
Query: 13 SNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVE 1095
++VM ++ S VFKESESLEG KI GYDFN G++YSQ+LKSMVSTGFQASN GDAIE VNQMLDWRL+ E + EDC + E++P YR+S++CK+FLGFTSNLISSGVRD +RYLVQHHMVDV+VTT GGIEEDL+KCLA TFKG+F+LPGA LRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQML+EQ + + WTPSK+I RLGKEIN+ESSYLYWAYKN+IPVFCPGLTDGSLGDMLYFH+FR+PGLI+D+VQDIRAIN EAVHA+PRKTG+IILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAK+VKVHCDATIAFPLLVAETFA++R + E
Sbjct: 8 ASVMENLRSVVFKESESLEGTCAKIRGYDFNNGIDYSQILKSMVSTGFQASNLGDAIETVNQMLDWRLSHEQVTEDCSQEEKNPTYRESIKCKIFLGFTSNLISSGVRDIIRYLVQHHMVDVIVTTTGGIEEDLIKCLADTFKGEFSLPGAELRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLEEQKAKNVLWTPSKLIMRLGKEINNESSYLYWAYKNDIPVFCPGLTDGSLGDMLYFHTFRNPGLIVDVVQDIRAINSEAVHANPRKTGMIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKSVKVHCDATIAFPLLVAETFAAKREQSAE 368
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match:
DHYS_SOLLC (Deoxyhypusine synthase OS=Solanum lycopersicum OX=4081 GN=DHS PE=2 SV=1)
HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0
Identity = 297/369 (80.49%), Postives = 331/369 (89.70%), Query Frame = 1
Query: 16 NVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFR---------SPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVE 1095
++M SV S VFKESE+LEG TKIEGYDFN+GVNY++L+KSMVSTGFQASN GDAI +VNQMLDWRL+ E+ EDC E ERD YR+SV CK+FLGFTSNL+SSGVRDTVRYLVQH MVDVVVTTAGGIEEDL+KCLAPT+KGDF+LPGA LRSKGLNRIGNLLVPNDNYCKFE+WIIP+FDQM +EQ E++ WTPSKVIARLGKEINDE+SYLYWAYKN IPVFCPGLTDGSLGDMLYFHSF+ +PGL+IDIV DIRA+NGEAVHA RKTG+IILGGGLPKHH+CNANMMRNGAD+AVFINTAQEFDGSDSGARPDEAVSWGKIRG AKTVKVHCDATIAFP+LVAETFA++ +F +
Sbjct: 8 SIMDSVRSVVFKESENLEGSCTKIEGYDFNKGVNYAELIKSMVSTGFQASNLGDAIAIVNQMLDWRLSHELPTEDCSEEERDVAYRESVTCKIFLGFTSNLVSSGVRDTVRYLVQHRMVDVVVTTAGGIEEDLIKCLAPTYKGDFSLPGASLRSKGLNRIGNLLVPNDNYCKFENWIIPVFDQMYEEQINEKVLWTPSKVIARLGKEINDETSYLYWAYKNRIPVFCPGLTDGSLGDMLYFHSFKKGDPDNPDLNPGLVIDIVGDIRAMNGEAVHAGLRKTGMIILGGGLPKHHVCNANMMRNGADFAVFINTAQEFDGSDSGARPDEAVSWGKIRGGAKTVKVHCDATIAFPILVAETFAAKSKEFSQ 376
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match:
DHYS_TOBAC (Deoxyhypusine synthase OS=Nicotiana tabacum OX=4097 GN=DHS1 PE=2 SV=1)
HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0
Identity = 296/372 (79.57%), Postives = 329/372 (88.44%), Query Frame = 1
Query: 1 MEDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFR---------SPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKF 1089
M + NVM SV S VFKESE+LEG TKIEGYDFN+GVNY++L KSM STGFQA+N GDAI++VNQMLDWRL+ E EDC E ERD YR+SV CK+FLGFTSNL+SSGVRDT+RYLVQH MVDVVVTTAGGIEEDL+KCLAPT+KGDF+LPGA LRSKGLNRIGNLLVPNDNYCKFE+WIIPIFDQM +EQ +E++ WTPSKVIARL KEINDE+SYLYWAYKN IPVFCPGLTDGSLGDMLYFHSF+ +PGLIIDIV DIRA+N EAVHA RKTG+IILGGGLPKHH+CNANMMRNGAD+AV+INTAQEFDGSDSGARPDEAVSWGKIRG AKTVKVHCDATIAFP+LVAETFA++R +
Sbjct: 1 MGEALNVMESVRSIVFKESENLEGSATKIEGYDFNKGVNYAELFKSMASTGFQAANLGDAIQIVNQMLDWRLSHEQPMEDCSEEERDVAYRESVTCKIFLGFTSNLVSSGVRDTIRYLVQHRMVDVVVTTAGGIEEDLIKCLAPTYKGDFSLPGAVLRSKGLNRIGNLLVPNDNYCKFENWIIPIFDQMYEEQIKEKVLWTPSKVIARLAKEINDETSYLYWAYKNRIPVFCPGLTDGSLGDMLYFHSFKKGDPDNPDLNPGLIIDIVGDIRAMNSEAVHAGSRKTGMIILGGGLPKHHVCNANMMRNGADFAVYINTAQEFDGSDSGARPDEAVSWGKIRGGAKTVKVHCDATIAFPILVAETFAAKRKEL 372
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match:
DHYS_MUSAC (Deoxyhypusine synthase OS=Musa acuminata OX=4641 GN=DHS PE=2 SV=1)
HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0
Identity = 268/359 (74.65%), Postives = 311/359 (86.63%), Query Frame = 1
Query: 4 EDNSNVMASVHSTVFKESESLEGKG-TKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASR 1077
+ + + +V S VFK S SLE K +++GYDFN+G + LL S+ STGFQASN GDAI+V+NQM+DWRL+ + EDC E ER+ YR+SV CK+FLGFTSNL+SSG+R+ +R+LVQH MV+V+VTTAGGIEEDL+KCLAPT+KGDF+LPG+YLRSKGLNRIGNLLVPNDNYCKFEDWI+PI DQML EQ E + WTPSKVIARLGKEINDESSYLYWAYKNN+ V+CP LTDGSLGDMLY HS R+PGL+IDIVQDIRA+NGEAVH RKTG+IILGGGLPKHHICNANM RNGADYAV++NTAQEFDGSDSGA PDEA+SWGKI+GSAKT+KVHCDATIAFPLLVA TFA +
Sbjct: 9 QRDRETLDAVRSVVFKPSVSLEEKRFPRVQGYDFNRGCDLIGLLDSISSTGFQASNLGDAIDVINQMIDWRLSHDAPTEDCSEEERNLAYRQSVTCKIFLGFTSNLVSSGIREIIRFLVQHRMVEVLVTTAGGIEEDLIKCLAPTYKGDFSLPGSYLRSKGLNRIGNLLVPNDNYCKFEDWIMPILDQMLLEQTTENVVWTPSKVIARLGKEINDESSYLYWAYKNNVSVYCPALTDGSLGDMLYCHSVRNPGLLIDIVQDIRAMNGEAVHVGLRKTGVIILGGGLPKHHICNANMFRNGADYAVYVNTAQEFDGSDSGAEPDEAISWGKIKGSAKTIKVHCDATIAFPLLVAATFARK 367
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match:
HSS1_SENVE (Homospermidine synthase 1 OS=Senecio vernalis OX=93496 GN=HSS1 PE=1 SV=1)
HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0
Identity = 268/364 (73.63%), Postives = 310/364 (85.16%), Query Frame = 1
Query: 4 EDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLA-DEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRS--PGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNK 1086
E N + S S VFKESESLEG KI GYDFN G+++S+LLKSMVSTGFQASN GDA+ + NQMLDWRL+ DEV + E + + R+SV+CK+FLGFTSNLISSGVR+T+ YL QH MVDV+VTT GGIEED +KCLA T+KG F+LPGA LRSKGLNRIGNL+VPNDNY KFEDWIIPIFDQML EQ + + WTPS++IARLGKEIN+E+SYLYWAYKNNIPVFCP +TDGS+GDMLYFHS + PGL++DIVQD+ A++ EAVHASP+KTG+IILGGGLPKHHICNANMMRNGAD+AVFINTAQE+DGSDSGARPDEAVSWGKI + K VKVHCDATIAFPLLVAETFA ++ K
Sbjct: 3 ESNKEAIDSARSNVFKESESLEGTCAKIGGYDFNNGIDHSKLLKSMVSTGFQASNLGDAMIITNQMLDWRLSHDEV---PENCSEEEKKNRESVKCKIFLGFTSNLISSGVRETICYLTQHRMVDVLVTTTGGIEEDFIKCLASTYKGKFSLPGADLRSKGLNRIGNLIVPNDNYIKFEDWIIPIFDQMLIEQKTQNVLWTPSRMIARLGKEINNETSYLYWAYKNNIPVFCPSITDGSIGDMLYFHSVSNPGPGLVVDIVQDVIAMDNEAVHASPQKTGIIILGGGLPKHHICNANMMRNGADFAVFINTAQEYDGSDSGARPDEAVSWGKISSTGKAVKVHCDATIAFPLLVAETFAVKKEK 363
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match:
HSS2_SENVE (Homospermidine synthase 2 OS=Senecio vernalis OX=93496 PE=1 SV=1)
HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0
Identity = 267/364 (73.35%), Postives = 309/364 (84.89%), Query Frame = 1
Query: 4 EDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLA-DEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRS--PGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNK 1086
E N + S S VFKESESLEG KI GYDFN G+++S+LLKSMVSTGFQASN GDA+ + NQML+WRL+ DEV E + + R+SV+CK+FLGFTSNLISSGVR+T+ YL QH MVDV+VTT GGIEED +KCLA T+KG F+LPGA LRSKGLNRIGNL+VPNDNY KFEDWIIPIFDQML EQ + + WTPS++IARLGKEIN+E+SYLYWAYKNNIPVFCP +TDGS+GDMLYFHS + PGL++DIVQD+ A++ EAVHASP+KTG+IILGGGLPKHHICNANMMRNGAD+AVFINTAQE+DGSDSGARPDEAVSWGKI + K VKVHCDATIAFPLLVAETFA ++ K
Sbjct: 3 ESNKEAIDSARSNVFKESESLEGTCAKIGGYDFNNGIDHSKLLKSMVSTGFQASNLGDAMIITNQMLEWRLSHDEV---PEHCSEEEKKNRESVKCKIFLGFTSNLISSGVRETICYLAQHRMVDVLVTTTGGIEEDFIKCLASTYKGKFSLPGADLRSKGLNRIGNLIVPNDNYIKFEDWIIPIFDQMLIEQKTQNVLWTPSRMIARLGKEINNETSYLYWAYKNNIPVFCPSITDGSIGDMLYFHSVSNPGPGLVVDIVQDVIAMDNEAVHASPQKTGIIILGGGLPKHHICNANMMRNGADFAVFINTAQEYDGSDSGARPDEAVSWGKISSTGKAVKVHCDATIAFPLLVAETFAVKKEK 363
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Match:
HSS1_SENVU (Homospermidine synthase OS=Senecio vulgaris OX=76276 GN=HSS1 PE=1 SV=1)
HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0
Identity = 267/364 (73.35%), Postives = 310/364 (85.16%), Query Frame = 1
Query: 4 EDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLA-DEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRS--PGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNK 1086
E N + S S VFKESESLEG KI GYDFN G+++S+LLKSMVSTGFQASN GDA+ + NQML+WRL+ DEV + E + + R+SV+CK+FLGFTSNLISSGVR+T+ YL QH MVDV+VTT GGIEED +KCLA T+KG F+LPGA LRSKGLNRIGNL+VPNDNY KFEDWIIPIFDQML EQ + + WTPS++IARLGKEIN+E+SYLYWAYKNNIPVFCP +TDGS+GDMLYFHS + PGL++DIVQD+ A++ EAVHASP+KTG+IILGGGLPKHHICNANMMRNGAD+AVFINTAQE+DGSDSGARPDEAVSWGKI + K VKVHCDATIAFPLLVAETFA ++ K
Sbjct: 3 ESNKEAIDSARSNVFKESESLEGTCAKIGGYDFNNGIDHSKLLKSMVSTGFQASNLGDAMIITNQMLEWRLSHDEV---PENCSEEEKKNRESVKCKIFLGFTSNLISSGVRETICYLTQHRMVDVLVTTTGGIEEDFIKCLASTYKGKFSLPGADLRSKGLNRIGNLIVPNDNYIKFEDWIIPIFDQMLIEQKTQNVLWTPSRMIARLGKEINNETSYLYWAYKNNIPVFCPSITDGSIGDMLYFHSVSNPGPGLVVDIVQDVIAMDNEAVHASPQKTGIIILGGGLPKHHICNANMMRNGADFAVFINTAQEYDGSDSGARPDEAVSWGKISSTGKAVKVHCDATIAFPLLVAETFAVKKEK 363
The following BLAST results are available for this feature:
BLAST of orange1.1g017671m.v1.1 vs. DB:SwissProt
Analysis Date: 2018-06-08 (
C. sinensis v1.1 CDS)
Total hits: 10
Match Name | E-value | Identity | Description | |
DHYS_ARATH | 0.000e+0 | 82.88 | Deoxyhypusine synthase OS=Arabidopsis thaliana OX=... | [more] |
DHYS_BRANA | 0.000e+0 | 82.24 | Deoxyhypusine synthase OS=Brassica napus OX=3708 G... | [more] |
DHYS_DIACA | 0.000e+0 | 82.88 | Deoxyhypusine synthase OS=Dianthus caryophyllus OX... | [more] |
DHYS_SENVE | 0.000e+0 | 81.72 | Deoxyhypusine synthase OS=Senecio vernalis OX=9349... | [more] |
DHYS_SOLLC | 0.000e+0 | 80.49 | Deoxyhypusine synthase OS=Solanum lycopersicum OX=... | [more] |
DHYS_TOBAC | 0.000e+0 | 79.57 | Deoxyhypusine synthase OS=Nicotiana tabacum OX=409... | [more] |
DHYS_MUSAC | 0.000e+0 | 74.65 | Deoxyhypusine synthase OS=Musa acuminata OX=4641 G... | [more] |
HSS1_SENVE | 0.000e+0 | 73.63 | Homospermidine synthase 1 OS=Senecio vernalis OX=9... | [more] |
HSS2_SENVE | 0.000e+0 | 73.35 | Homospermidine synthase 2 OS=Senecio vernalis OX=9... | [more] |
HSS1_SENVU | 0.000e+0 | 73.35 | Homospermidine synthase OS=Senecio vulgaris OX=762... | [more] |
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>orange1.1g017671m.v1.1_Csinensis_154_v1.1 ID=orange1.1g017671m.v1.1_Csinensis_154_v1.1; Name=orange1.1g017671m.v1.1; organism=Citrus sinensis; type=mRNA; length=4110bp
CGTCTCCAAACCCTTAAAGAGCAGCCAGCTTTATTTCAACGCTCATTTTC
AATTTTTTTTAAAATTATTGTATCACAACCATCTTGTTCCCTTGAAGAAA
TAAAATTGTTTGCTTTCTTCTATCTCTATACTCGCAAATTACTAAAGAGA
AAAAAAAAAAAAGGGAAGCGATGGAGGATAATAGTAATGTTATGGCGTCA
GTTCACTCTACAGTCTTCAAGGAATCGGAATCCCTCGAAGGCAAAGGCAC
TAAAATCGAGGGTTATGATTTTAATCAAGGCGTTAATTACTCTCAGCTTC
TTAAATCAATGGTCTCCACTGGCTTTCAAGCTTCTAATTTCGGTGACGCC
ATTGAAGTCGTCAATCAAATGGTTTGTTTCTCCTCCCAACAGTTCCAATC
ATTCGTTAAATTCTTCTTCTTCTTCTTTTAACTATCATGCTAAAAAGTTA
TATATATATTTTTTAAAAAAATTGGATTGAAGCTAGATTGGAGGCTTGCT
GACGAGGTGATACCGGAAGATTGTGATGAGAGAGAGAGGGATCCGGAGTA
CAGGAAGTCTGTTCGATGCAAAGTGTTTCTGGGTTTTACTTCTAATCTTA
TTTCCTCTGGTGTTAGAGATACCGTTCGCTATCTTGTACAGCATCATATG
GTCAGCGTCTTATTTTAATTTTTATGTTTGATAATTTTACATAGAGGAAG
ATATTTCGATTTTTCAGACCTGATTATTATAATATTAGCTGCATTCTAAT
CATGACTCTAGTATTTTGAGCGAGTTTGTGTGTGATAATAAGATGCTTTA
GTGAAGATACTGTCTTTCACATTCTTGTAACATGAAGAGTTTTCCGTTTG
AATTTTTACTTCCACATTGAATTTGAGAACATAATATCGGAGAAATTATG
ATAAGAGTTGACCAACTTACATTTGGCTCCTGGATTTCTTCTCCTCGATG
TAATATATGCCAATATGGGCTTCTCACTGGTTCTAGTCTGCACTCTTTAA
AAGCTTATGAATGTTCCAGCTGCTTATAAGAAATAGGTTCTTCATGCTAA
CTGGTTGGGCTGATTGGCGATAGGGGAAAAATCTCCCTCTCTCTCATATG
TTAGTTCAGCTGTTAAGAGATATCTTTGAATATTAATGACTTGGTTTTTT
CTGATTGTTCATGTTTGTGAATCCTCACCCTGCTCAGTTTTTTATTTTTT
GGGTTGTGATTAATGAATGGATTTTGCATCTTTATGATTTGGTTGCTTTT
CATTTTAACTAGATTGTTAGAATTGGCACTTCTAATATGACTGCAGGTAG
ATGTAGTGGTAACAACAGCTGGTGGTATTGAAGAGGATCTCGTAAAATGC
CTTGCACCTACCTTTAAAGGGGATTTTGCTCTACCTGGAGCTTATTTACG
ATCAAAAGGATTGAACCGCATTGGGAATCTGTTGGTTCCTAATGACAACT
ACTGCAAATTTGAGGATTGGATCATTCCCATTTTTGACCAGATGCTGAAA
GAACAAAATGAAGAGGCACTTTCTCATCTTTCTATAATTTTTTGTTCATA
TTTATGTTTGTAAGATATTCTCTTGAGTGTATGTTTCTATTTATTTCTCT
AATTAATTCGCTTGATGTCAGCATTTCACTTCCTAAATGTTTATTCATGT
CTGTCATATCAAGATCTGCGAACCCGTAAGTTAGTTAGTTCTAAATTCTT
TTACCAAAGTTAGAAAGAAAGGAAGATTTTTTTAAATTTAAATCTAAATT
ATTCTGCCTTATTAAATATTTGAGTTTATAAACATGAAAGCATTTATTGT
TGGCAATTACGGGTTGTAGAAGTCATTGTTTTGATATGCCAATTACTATC
TCCTAGTTGTTTTTTATAATTTGCTCCTGTAATTAGTGGCATTATAATTA
CGAAGAGGAGTGCCTTTTTTTTTTCTTTAATTATTCTTCACCCTTAGGCC
TTTGTCCAAAGCATTTTGTCTTATGCTCAAGTTATATGCCATCGTTGGCA
ATCATGTACTGAGCTCTAAGAACATTAGTACCCTTTCTCCTTTTGGTTTC
ACAGGAGATATCGTGGACACCATCTAAGGTAATTGCTCGGCTAGGAAAAG
AAATAAATGATGAGAGTTCATATCTTTACTGGGCATATAAGGTAAGTATT
CATTCAAGTTTAGCTTCATATTTTTGTTTCCTTCTTTTTCATCATGGCAC
ATTGATCAATATTCTTGTCTGTAACCAATCACATTTTATGATTATCCTCA
TTTATATTTCCTTAACATCTTTCAGCAATTAGTATCTGCTCTGCATGCTC
CTTCATTATTTTCAAATAAATGAATAACATATTAACTCCCACTCTTTTCT
TTTCCCTTTTATTAATCTTTTTTCTTTCTTTTTACTCAAATGGTTCTCTT
TTGTTATATATCATGTACATTTCATAATCTCAAACCAGCGAGTCGGGTAT
GTTTACTGCGCAAGTGACTCAAAAGTTTTGACCATGAAAATTGAAATCTT
TCATCTCCGCATAGTAACCTATGTGGTAGGAGATTATAAATCTTTTTAAT
TCATTCTCTCATGTTCATACAAACATGCATACATTCTTCTGAAATCTCTG
GTTTAATAAGTTTCTGGAACTTGAGAGAAATTTCACTATCCGAAGTTTGG
GTCTGCAAGGTAAAATTCCCATAGAAGTTTTGTGGAAATATCTGCAGCCA
ACGTGTGGCAGTACTTCACACTCTGTTATGGAATTTTAGTTTGAAGGGGA
CGGCAATGTCTATTTAGTACAAAAGTCGCAATCCAATAGGGATTGTGATT
TTGAGTAACAACAGAATCATAAATGGGTTTTATACTGAATGCATCAGTAG
TAGGGAATTTAAATGTGTTCACTAGATGTTATACCATGAGTGCAAATCTG
CATAATATGCAGTGTTTACTCTTATGTAATGCTACTCTTAGTTGTTGTAC
TGTTTATTCATATAAAATGCTACTCTGAGGTTGAGATGTGGTTCAATATA
ATGCGAAGTAATGGTAAACATTCAATGTCTGCCAGTCTGCAATCTATGTA
CGGTTTATTCTTATATGATGCTACTCTAAGCTGTTCAATTCAATGCCAAG
TAATGGTAACAGTCAACGCCTTCAAGATATTTTGATATTCTTCTGGGACA
TTCTGCAGAACAATATTCCAGTCTTTTGTCCAGGCTTAACTGATGGCTCA
CTGGGGGATATGTTGTATTTTCATTCCTTCCGAAGCCCAGGCCTGATCAT
TGACATTGTGCAAGGTAGATTTTTCCTATTTCCATGTCTAGTTAGCAGTT
TCAGATTTTTATCTAAAAAGATATTTGAACAGATATCAGGGCAATTAATG
GTGAAGCTGTTCATGCAAGTCCTAGGAAAACTGGGTTGATAATTTTAGGA
GGTGGGTTACCAAAGCATCATATTTGCAATGCCAATATGATGCGCAATGG
AGCAGATTATGCTGTCTTTATCAATACAGCCCAGGAATTTGATGGGAGTG
ATTCCGGTGCCCGCCCTGATGAGGCTGTGTCGTGGGGAAAAATTCGAGGT
TCAGCAAAAACTGTGAAGGTATTTCTCCATTTTATTCTTATAGGTTGTTT
GTTGGTTTTATTATCTTTTGCAGATGCATATGATTCTAACATTTCCTTTC
CATTGGTTTTAATCAGGTACACTGTGACGCAACCATTGCTTTTCCTCTGT
TGGTTGCTGAAACATTTGCCTCAAGAAGAAATAAATTTGTTGAGACTGAG
CGCTAAAAATTGAACTTTGGCCATGTGAAGATTTACATGATGAACTGCTG
TTACAGTCCTGATTAAGTTATTACTTGGCCTGTTTTACAACTGCCTCAGA
TTATATAAGTGGACGCAACTACGAATCAAAGAGGATAGCTATCGTATCTG
ACAAGAATTTTCCTGCTAATTGATTCTTTTCTATGGTTACATAGTGACTT
GTATTGAATGTAACTCATGGAAGTATAGGGAATTTCTTTCTCTGACAAGT
TGTCTTTAGCTTTTAATCTTGAAATATCAATTCATTCACCACCATTGGAT
GTAGCTTGTTCTTGTTGTGAAAGTGACTTCTCGGATCATGAAATAAACGT
ACATCAGTTT
back to topmRNA from alignment at scaffold00069:490997..495106-
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
> ID=; Name=; organism= ; type=; length=4110bp; location=Sequence derived from: scaffold00069:490997..495106- (Citrus sinensis
CGTCTCCAAACCCTTAAAGAGCAGCCAGCTTTATTTCAACGCTCATTTTC
AATTTTTTTTAAAATTATTGTATCACAACCATCTTGTTCCCTTGAAGAAA
TAAAATTGTTTGCTTTCTTCTATCTCTATACTCGCAAATTACTAAAGAGA
AAAAAAAAAAAAGGGAAGCGATGGAGGATAATAGTAATGTTATGGCGTCA
GTTCACTCTACAGTCTTCAAGGAATCGGAATCCCTCGAAGGCAAAGGCAC
TAAAATCGAGGGTTATGATTTTAATCAAGGCGTTAATTACTCTCAGCTTC
TTAAATCAATGGTCTCCACTGGCTTTCAAGCTTCTAATTTCGGTGACGCC
ATTGAAGTCGTCAATCAAATGGTTTGTTTCTCCTCCCAACAGTTCCAATC
ATTCGTTAAATTCTTCTTCTTCTTCTTTTAACTATCATGCTAAAAAGTTA
TATATATATTTTTTAAAAAAATTGGATTGAAGCTAGATTGGAGGCTTGCT
GACGAGGTGATACCGGAAGATTGTGATGAGAGAGAGAGGGATCCGGAGTA
CAGGAAGTCTGTTCGATGCAAAGTGTTTCTGGGTTTTACTTCTAATCTTA
TTTCCTCTGGTGTTAGAGATACCGTTCGCTATCTTGTACAGCATCATATG
GTCAGCGTCTTATTTTAATTTTTATGTTTGATAATTTTACATAGAGGAAG
ATATTTCGATTTTTCAGACCTGATTATTATAATATTAGCTGCATTCTAAT
CATGACTCTAGTATTTTGAGCGAGTTTGTGTGTGATAATAAGATGCTTTA
GTGAAGATACTGTCTTTCACATTCTTGTAACATGAAGAGTTTTCCGTTTG
AATTTTTACTTCCACATTGAATTTGAGAACATAATATCGGAGAAATTATG
ATAAGAGTTGACCAACTTACATTTGGCTCCTGGATTTCTTCTCCTCGATG
TAATATATGCCAATATGGGCTTCTCACTGGTTCTAGTCTGCACTCTTTAA
AAGCTTATGAATGTTCCAGCTGCTTATAAGAAATAGGTTCTTCATGCTAA
CTGGTTGGGCTGATTGGCGATAGGGGAAAAATCTCCCTCTCTCTCATATG
TTAGTTCAGCTGTTAAGAGATATCTTTGAATATTAATGACTTGGTTTTTT
CTGATTGTTCATGTTTGTGAATCCTCACCCTGCTCAGTTTTTTATTTTTT
GGGTTGTGATTAATGAATGGATTTTGCATCTTTATGATTTGGTTGCTTTT
CATTTTAACTAGATTGTTAGAATTGGCACTTCTAATATGACTGCAGGTAG
ATGTAGTGGTAACAACAGCTGGTGGTATTGAAGAGGATCTCGTAAAATGC
CTTGCACCTACCTTTAAAGGGGATTTTGCTCTACCTGGAGCTTATTTACG
ATCAAAAGGATTGAACCGCATTGGGAATCTGTTGGTTCCTAATGACAACT
ACTGCAAATTTGAGGATTGGATCATTCCCATTTTTGACCAGATGCTGAAA
GAACAAAATGAAGAGGCACTTTCTCATCTTTCTATAATTTTTTGTTCATA
TTTATGTTTGTAAGATATTCTCTTGAGTGTATGTTTCTATTTATTTCTCT
AATTAATTCGCTTGATGTCAGCATTTCACTTCCTAAATGTTTATTCATGT
CTGTCATATCAAGATCTGCGAACCCGTAAGTTAGTTAGTTCTAAATTCTT
TTACCAAAGTTAGAAAGAAAGGAAGATTTTTTTAAATTTAAATCTAAATT
ATTCTGCCTTATTAAATATTTGAGTTTATAAACATGAAAGCATTTATTGT
TGGCAATTACGGGTTGTAGAAGTCATTGTTTTGATATGCCAATTACTATC
TCCTAGTTGTTTTTTATAATTTGCTCCTGTAATTAGTGGCATTATAATTA
CGAAGAGGAGTGCCTTTTTTTTTTCTTTAATTATTCTTCACCCTTAGGCC
TTTGTCCAAAGCATTTTGTCTTATGCTCAAGTTATATGCCATCGTTGGCA
ATCATGTACTGAGCTCTAAGAACATTAGTACCCTTTCTCCTTTTGGTTTC
ACAGGAGATATCGTGGACACCATCTAAGGTAATTGCTCGGCTAGGAAAAG
AAATAAATGATGAGAGTTCATATCTTTACTGGGCATATAAGGTAAGTATT
CATTCAAGTTTAGCTTCATATTTTTGTTTCCTTCTTTTTCATCATGGCAC
ATTGATCAATATTCTTGTCTGTAACCAATCACATTTTATGATTATCCTCA
TTTATATTTCCTTAACATCTTTCAGCAATTAGTATCTGCTCTGCATGCTC
CTTCATTATTTTCAAATAAATGAATAACATATTAACTCCCACTCTTTTCT
TTTCCCTTTTATTAATCTTTTTTCTTTCTTTTTACTCAAATGGTTCTCTT
TTGTTATATATCATGTACATTTCATAATCTCAAACCAGCGAGTCGGGTAT
GTTTACTGCGCAAGTGACTCAAAAGTTTTGACCATGAAAATTGAAATCTT
TCATCTCCGCATAGTAACCTATGTGGTAGGAGATTATAAATCTTTTTAAT
TCATTCTCTCATGTTCATACAAACATGCATACATTCTTCTGAAATCTCTG
GTTTAATAAGTTTCTGGAACTTGAGAGAAATTTCACTATCCGAAGTTTGG
GTCTGCAAGGTAAAATTCCCATAGAAGTTTTGTGGAAATATCTGCAGCCA
ACGTGTGGCAGTACTTCACACTCTGTTATGGAATTTTAGTTTGAAGGGGA
CGGCAATGTCTATTTAGTACAAAAGTCGCAATCCAATAGGGATTGTGATT
TTGAGTAACAACAGAATCATAAATGGGTTTTATACTGAATGCATCAGTAG
TAGGGAATTTAAATGTGTTCACTAGATGTTATACCATGAGTGCAAATCTG
CATAATATGCAGTGTTTACTCTTATGTAATGCTACTCTTAGTTGTTGTAC
TGTTTATTCATATAAAATGCTACTCTGAGGTTGAGATGTGGTTCAATATA
ATGCGAAGTAATGGTAAACATTCAATGTCTGCCAGTCTGCAATCTATGTA
CGGTTTATTCTTATATGATGCTACTCTAAGCTGTTCAATTCAATGCCAAG
TAATGGTAACAGTCAACGCCTTCAAGATATTTTGATATTCTTCTGGGACA
TTCTGCAGAACAATATTCCAGTCTTTTGTCCAGGCTTAACTGATGGCTCA
CTGGGGGATATGTTGTATTTTCATTCCTTCCGAAGCCCAGGCCTGATCAT
TGACATTGTGCAAGGTAGATTTTTCCTATTTCCATGTCTAGTTAGCAGTT
TCAGATTTTTATCTAAAAAGATATTTGAACAGATATCAGGGCAATTAATG
GTGAAGCTGTTCATGCAAGTCCTAGGAAAACTGGGTTGATAATTTTAGGA
GGTGGGTTACCAAAGCATCATATTTGCAATGCCAATATGATGCGCAATGG
AGCAGATTATGCTGTCTTTATCAATACAGCCCAGGAATTTGATGGGAGTG
ATTCCGGTGCCCGCCCTGATGAGGCTGTGTCGTGGGGAAAAATTCGAGGT
TCAGCAAAAACTGTGAAGGTATTTCTCCATTTTATTCTTATAGGTTGTTT
GTTGGTTTTATTATCTTTTGCAGATGCATATGATTCTAACATTTCCTTTC
CATTGGTTTTAATCAGGTACACTGTGACGCAACCATTGCTTTTCCTCTGT
TGGTTGCTGAAACATTTGCCTCAAGAAGAAATAAATTTGTTGAGACTGAG
CGCTAAAAATTGAACTTTGGCCATGTGAAGATTTACATGATGAACTGCTG
TTACAGTCCTGATTAAGTTATTACTTGGCCTGTTTTACAACTGCCTCAGA
TTATATAAGTGGACGCAACTACGAATCAAAGAGGATAGCTATCGTATCTG
ACAAGAATTTTCCTGCTAATTGATTCTTTTCTATGGTTACATAGTGACTT
GTATTGAATGTAACTCATGGAAGTATAGGGAATTTCTTTCTCTGACAAGT
TGTCTTTAGCTTTTAATCTTGAAATATCAATTCATTCACCACCATTGGAT
GTAGCTTGTTCTTGTTGTGAAAGTGACTTCTCGGATCATGAAATAAACGT
ACATCAGTTT
back to topCoding sequence (CDS) from alignment at scaffold00069:490997..495106-
>orange1.1g017671m.v1.1_Csinensis_154_v1.1 ID=orange1.1g017671m.v1.1_Csinensis_154_v1.1; Name=orange1.1g017671m.v1.1; organism=Citrus sinensis; type=CDS; length=1107bp; location=Sequence derived from: scaffold00069:490997..495106- (Citrus sinensis
ATGGAGGATAATAGTAATGTTATGGCGTCAGTTCACTCTACAGTCTTCAA
GGAATCGGAATCCCTCGAAGGCAAAGGCACTAAAATCGAGGGTTATGATT
TTAATCAAGGCGTTAATTACTCTCAGCTTCTTAAATCAATGGTCTCCACT
GGCTTTCAAGCTTCTAATTTCGGTGACGCCATTGAAGTCGTCAATCAAAT
GCTAGATTGGAGGCTTGCTGACGAGGTGATACCGGAAGATTGTGATGAGA
GAGAGAGGGATCCGGAGTACAGGAAGTCTGTTCGATGCAAAGTGTTTCTG
GGTTTTACTTCTAATCTTATTTCCTCTGGTGTTAGAGATACCGTTCGCTA
TCTTGTACAGCATCATATGGTAGATGTAGTGGTAACAACAGCTGGTGGTA
TTGAAGAGGATCTCGTAAAATGCCTTGCACCTACCTTTAAAGGGGATTTT
GCTCTACCTGGAGCTTATTTACGATCAAAAGGATTGAACCGCATTGGGAA
TCTGTTGGTTCCTAATGACAACTACTGCAAATTTGAGGATTGGATCATTC
CCATTTTTGACCAGATGCTGAAAGAACAAAATGAAGAGGAGATATCGTGG
ACACCATCTAAGGTAATTGCTCGGCTAGGAAAAGAAATAAATGATGAGAG
TTCATATCTTTACTGGGCATATAAGAACAATATTCCAGTCTTTTGTCCAG
GCTTAACTGATGGCTCACTGGGGGATATGTTGTATTTTCATTCCTTCCGA
AGCCCAGGCCTGATCATTGACATTGTGCAAGATATCAGGGCAATTAATGG
TGAAGCTGTTCATGCAAGTCCTAGGAAAACTGGGTTGATAATTTTAGGAG
GTGGGTTACCAAAGCATCATATTTGCAATGCCAATATGATGCGCAATGGA
GCAGATTATGCTGTCTTTATCAATACAGCCCAGGAATTTGATGGGAGTGA
TTCCGGTGCCCGCCCTGATGAGGCTGTGTCGTGGGGAAAAATTCGAGGTT
CAGCAAAAACTGTGAAGGTACACTGTGACGCAACCATTGCTTTTCCTCTG
TTGGTTGCTGAAACATTTGCCTCAAGAAGAAATAAATTTGTTGAGACTGA
GCGCTAA
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