Cs8g12820.1, Cs8g12820.1_Hzau_Valencia_v2.0 (mRNA) Citrus sinensis
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Cs8g12820.1 vs. DB:SwissProt
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g06620 PE=2 SV=1) HSP 1 Score: 380.178 bits (975), Expect = 1.046e-129 Identity = 191/373 (51.21%), Postives = 259/373 (69.44%), Query Frame = 1 Query: 40 MTSSLQQIMASTGNGLDYDKEQELKTFDDTKAGVKGLVDSGIQSVPKFFVASSEETCNEKSDLRHTHFNVPIIDLRDIDKDG-ARCEIVKEIGIASSTWGFFQVVNHDIPQDITDEVIESIRRFNEQPNHVKEKFYSRDKMKKVRFNSNFDLYKARFANWRDTLSCLMAXXXXXXXXXXXACREILLKFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFYCHYYPACPERNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHRVLANCAGPRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKGYIDFFASAGLPAYSSLTRLRL 1155 M SSL Q+ A D+ LK FD+TK GVKGL+D+GI +P F A + K + F++P IDL+ D R +V++IG A+ WGFFQV+NH IP D+ +++I+ IR F+EQ VK+ FYSRD K+ ++SNFDL+ + ANWRDTL C AP+PP PE+ P C E+++++SK V KLG+ LF+LLSEALGLN+NHL +M C + + HYYP CP+ +LTLG TKH D FLTILLQ+ IGGLQVLHD +WV++PPV GALVVNVG+LLQ+I+NDKF + EHRVLAN AGPR+SVACFF+++ + +++ PI+E+LS+++PP YR TT+ Y F+ S G S L L++ Sbjct: 1 MESSLPQVAA-------LDRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPP-SSSDFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365
BLAST of Cs8g12820.1 vs. DB:SwissProt
Match: ACH12_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana OX=3702 GN=At5g59540 PE=2 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 1.588e-115 Identity = 175/364 (48.08%), Postives = 245/364 (67.31%), Query Frame = 1 Query: 73 TGNGLDYDKEQELKTFDDTKAGVKGLVDSGIQSVPKFFVASSEETCNEKSDLRHTHFNVPIIDLRDIDKDGA-RCEIVKEIGIASSTWGFFQVVNHDIPQDITDEVIESIRRFNEQPNHVKEKFYSRDK-MKKVRFNSNFDLYKARFA-NWRDTLSCLMAXXXXXXXXXXXACREILLKFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFYCHYYPACPERNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHRVLANCAGPRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKGYIDFFASAGLPAYSSLTRLRL 1155 T N +++D E K FD+TK GVKGLVD+ I VP+ F + N+K + +PIID + D A R IV+++ A WGFFQV+NH IP ++ +E+ + +RRF+E+ VK+ F+SRD KK +NSNFDLY + + NWRD+ SC +AP+PP PEE PE CR+ + ++SK+V G LF+LLSEALGL S L +M C + CHYYP CP+ +LTLG TKH D FLT+LLQ+ IGGLQ+LH + WV++ P+ GALVVN+G+ LQ+I+NDKF + EHRVLAN GPR+SVA FF++ P+ +++ P++EL+S+++PP YR T+K Y F GL S L+ +R+ Sbjct: 3 TKNSIEFDPYIERKAFDETKQGVKGLVDAKITEVPRIFHHRQDILTNKKPSASVSDLEIPIIDFASVHADTASREAIVEKVKYAVENWGFFQVINHSIPLNVLEEIKDGVRRFHEEDPEVKKSFFSRDAGNKKFVYNSNFDLYSSSPSVNWRDSFSCYIAPDPPAPEEIPETCRDAMFEYSKHVLSFGGLLFELLSEALGLKSQTLESMDCVKTLLMICHYYPPCPQPDLTLGITKHSDNSFLTLLLQDNIGGLQILHQDSWVDVSPIHGALVVNIGDFLQLITNDKFVSVEHRVLANRQGPRISVASFFSSSMRPNSRVYGPMKELVSEENPPKYRDITIKEYSKIFFEKGLDGTSHLSNIRI 366
BLAST of Cs8g12820.1 vs. DB:SwissProt
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus OX=4058 GN=D4H PE=1 SV=2) HSP 1 Score: 344.354 bits (882), Expect = 3.879e-115 Identity = 173/362 (47.79%), Postives = 249/362 (68.78%), Query Frame = 1 Query: 103 QELKTFDDTKAGVKGLVDSGIQSVPKFFVASSE-----ETCNEKSDLRHTHFNVPIIDLRDIDKDGA-RCEIVKEIGIASSTWGFFQVVNHDIPQDITDEVIESIRRFNEQPNHVKEKFYSRDKMKK-VRFNSNFDLYKARFANWRDTLSCLMAXXXXXXXXXXXACREILLKFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFYCHYYPACPERNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHRVLANCAGPRLSVACFFTTHFEPSE----KLFSPIEELLSDDSPPLYRGTTVKGYIDFFASAGLPAYSSLTRLRL 1155 +ELK FD+TKAGVKG+VD+GI +P+ F+ + C KSD++ +P+I+L + + R EIV++IG AS +GFFQ+VNH IPQD+ D++++ +R+F+EQ + +K ++YSRD+ K ++SN+ L NWRDT+ C+M N P P+E+P+ CR+IL+K+S YV LG LF+LLSEALGL NHL M CA+G + HYYPACP+ LT G +KH D FLTIL+Q+QIGGLQ+L +N W+++P + GALV+N+ +LLQ+I+NDKFK+ EHRVLAN GPR+SVA F + E +L+ PI+EL+S+++PP+Y+ TVK +I + SSL+ RL Sbjct: 43 RELKAFDETKAGVKGIVDTGITKIPRIFIDQPKNLDRISVCRGKSDIK-----IPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRDTMECIMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFITIRFAKRFDDSSSLSPFRL 399
BLAST of Cs8g12820.1 vs. DB:SwissProt
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g06650 PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 6.682e-115 Identity = 174/361 (48.20%), Postives = 247/361 (68.42%), Query Frame = 1 Query: 91 YDKEQELKTFDDTKAGVKGLVDSGIQSVPKFFVASSEETCNEK---SDLRHTHFNVPIIDL--RDIDKDGARCEIVKEIGIASSTWGFFQVVNHDIPQDITDEVIESIRRFNEQPNHVKEKFYSRDKMKKVRFNSNFDLYKARFANWRDTLSCLMAXXXXXXXXXXXACREILLKFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFYCHYYPACPERNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHRVLANCAG-PRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKGYIDFFASAGLPAYSSLTRLRL 1155 +D+ ELK FD+TK GVKGLVDSG+ VP+ F + + K SDL H +P IDL RD R ++EI A++ WGFFQV+NH + ++ +++ + +R F+EQ V+++FYSRD ++ + SNFDL+ + ANWRDT SC MAP+ P P++ PE CR+I++++SK V LG+ LF+LLSEALGL NHL +M C+ G + HYYP CPE +LTLG ++H D FLT+LL +QI GLQV + HW ++P V GAL++N+G+LLQ+I+NDKF + EHRVLAN A R+SVACFFTT P+ +++ PI EL+S+++PP YR TT+K Y +F + GL S+L ++ Sbjct: 10 FDRASELKAFDETKTGVKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLK-TIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAPDTPKPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEENPPKYRETTIKDYATYFNAKGLDGTSALLHFKI 369
BLAST of Cs8g12820.1 vs. DB:SwissProt
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g06640 PE=2 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 1.690e-113 Identity = 178/370 (48.11%), Postives = 248/370 (67.03%), Query Frame = 1 Query: 64 MASTGNGLDYDKEQELKTFDDTKAGVKGLVDSGIQSVPKFFVASSEETCNEK---SDLRHTHFNVPIIDL--RDIDKDGARCEIVKEIGIASSTWGFFQVVNHDIPQDITDEVIESIRRFNEQPNHVKEKFYSRDKMKKVRFNSNFDLYKARFANWRDTLSCLMAXXXXXXXXXXXACREILLKFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFYCHYYPACPERNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHRVLANCAG-PRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKGYIDFFASAGLPAYSSLTRLRL 1155 M ST +D+ ELK FD+TK GVKGLVDSGI +P+ F SS E N K SDL H +P IDL RD ++ I A++ WGFFQV+NH + ++ +++ + +R F+EQP V++ YSRD +K + SNFDLY A ANWRDT C MAP+PP P++ PE CR++++++SK V LG+ LF+LLSEALGLN NHL +M C G CHY+P CPE +LT G +KH D FLT+LL + I GLQV + +W ++P V GAL++N+G+LLQ+I+NDKF + +HRVLAN A R+SVACFF TH +P+ +++ PI+EL+S+++PP YR TT++ Y +F GL S+L ++ Sbjct: 1 MESTKIAPSFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELANPKPLPSDLLHLK-TIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAPDPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNPRVYGPIKELVSEENPPKYRETTIRDYATYFNGKGLGGTSALLDFKV 369
BLAST of Cs8g12820.1 vs. DB:SwissProt
Match: ACH10_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 10 OS=Arabidopsis thaliana OX=3702 GN=At5g43450 PE=2 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 4.423e-111 Identity = 171/358 (47.77%), Postives = 241/358 (67.32%), Query Frame = 1 Query: 73 TGNGLDYDKEQELKTFDDTKAGVKGLVDSGIQSVPKFF-VASSEETCNEKSDLRHTHFNVPIIDLRDIDKDGARCEIVKEIGIASSTWGFFQVVNHDIPQDITDEVIESIRRFNEQPNHVKEKFYSRDKMKKVRFNSNFDLYKARFANWRDTLSCLMAXXXXXXXXXXXACREILLKFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFYCHYYPACPERNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHRVLANCAGPRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKGYIDFFASAGLPAYSSLT 1143 T N D+ +L TF TK GVKGLVD+ I VP F V SS + N SD+ + VPIIDL D + +R ++ +I A+ WGFFQV+NHD+P + +E+ ES+RRF+EQ VK ++ D K+ +N++FDLY + NWRD+ +C +AP+PP PEE P ACR +++++K+V +LG LF+LLSEALGL+S L + C G CHYYP CP+ +LTLG +KH D FLT+LLQ+QIGGLQVLH+++WV++PPV GALVVN+G+ +Q+I+NDKF + EHRV N PR+SVACFF++ P+ ++ PI++LLSD++P Y+ T+ Y F ++ S LT Sbjct: 2 TENSEKIDRLNDLTTFISTKTGVKGLVDAEITEVPSMFHVPSSILSNNRPSDISGLNLTVPIIDLGDRNT-SSRNVVISKIKDAAENWGFFQVINHDVPLTVLEEIKESVRRFHEQDPVVKNQYLPTDNNKRFVYNNDFDLYHSSPLNWRDSFTCYIAPDPPNPEEIPLACRSAVIEYTKHVMELGAVLFQLLSEALGLDSETLKRIDCLKGLFMLCHYYPPCPQPDLTLGISKHTDNSFLTLLLQDQIGGLQVLHEDYWVDVPPVPGALVVNIGDFMQLITNDKFLSVEHRVRPNKDRPRISVACFFSSSLSPNSTVYGPIKDLLSDENPAKYKDITIPEYTAGFLASIFDEKSYLT 358
BLAST of Cs8g12820.1 vs. DB:SwissProt
Match: ACCH5_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana OX=3702 GN=2A6 PE=2 SV=2) HSP 1 Score: 331.643 bits (849), Expect = 3.208e-110 Identity = 169/358 (47.21%), Postives = 245/358 (68.44%), Query Frame = 1 Query: 94 DKEQELKTFDDTKAGVKGLVDSGIQSVPKFFVASSEE-TCNEKSDLRHTHFNVPIIDLRDIDKDG-ARCEIVKEIGIASSTWGFFQVVNHDIPQDITDEVIESIRRFNEQPNHVKEKFYSRDKMKKVRFNSNFDLYKA-RFANWRDTLSCLMAXXXXXXXXXXXACREILLKFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFYCHYYPACPERNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHRVLANCAG-PRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKGYIDFFASAGLPAYSSLTRLRL 1155 D+ + K FD+TK GVKGLV SGI+ +P F + T +++ +P +DL+ D +R +V++IG A+ WGFFQVVNH I ++ + + E IRRF+EQ VK++FYSRD + V + SN DL+ + ANWRDTL+C MAP+PP ++ P C EI++++SK + LG+ LF+LLSEALGLN NHL +MGCA H+ + YYP CP+ +LTLG +KH D F+TILLQ+ IGGLQV+HD WV++ PV GALV+N+G+LLQ+ISNDKF +AEHRV+AN + PR+S+ CF +T +P+ +++ PI+ELLS+ +P YR T+ + + F S + ++ +L R+ Sbjct: 42 DRSSQAKAFDETKTGVKGLVASGIKEIPAMFHTPPDTLTSLKQTAPPSQQLTIPTVDLKGGSMDLISRRSVVEKIGDAAERWGFFQVVNHGISVEVMERMKEGIRRFHEQDPEVKKRFYSRDHTRDVLYYSNIDLHTCNKAANWRDTLACYMAPDPPKLQDLPAVCGEIMMEYSKQLMTLGEFLFELLSEALGLNPNHLKDMGCAKSHIMFGQYYPPCPQPDLTLGISKHTDFSFITILLQDNIGGLQVIHDQCWVDVSPVPGALVINIGDLLQLISNDKFISAEHRVIANGSSEPRISMPCFVSTFMKPNPRIYGPIKELLSEQNPAKYRDLTITEFSNTFRSQTI-SHPALHHFRI 398
BLAST of Cs8g12820.1 vs. DB:SwissProt
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum OX=4081 GN=ACO3 PE=2 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 2.637e-109 Identity = 184/360 (51.11%), Postives = 246/360 (68.33%), Query Frame = 1 Query: 91 YDKEQELKTFDDTKAGVKGLVDSGIQSVPKFFVASSEETCNEKSDLRHTHFNVPIIDLRDIDKDGAR-CEIVKEIGIASSTWGFFQVVNHDIPQDITDEVIESIRRFNEQPNHVKEKFYSRDKMKKVRFNSNFDLYKARF--ANWRDTLSCLMAXXXXXXXXXXXACREILLKFSKYVTKLGQDLFKLLSEALGLNSNHLTN-MGCADGHVF-YCHYYPACPERNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHRVLANCAGPRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKGYIDFFASAGLPAYSSLTRLRL 1155 YDK ELK FDDTKAGVKGLVDSGI VP+ FV ++ ++ THF P+IDL+ ID+D + EIV ++ AS WGFFQVVNH IP + D ++ R+F EQ N VK+++Y+RD KKV + SN DLYK+ A+WRDT+ C MAPNPP +E+P C E L+ FSK V KLG L +LLSE LGL+ ++L + M C H+F C+YYP CP+ LT+G +H D F+TILLQ+ +GGLQVLH NHWV++PP G+LVVN+G+ LQ++SNDK+ + EHR ++N G R+S+ CFF S KL+ PI ELLS+D+PP YR TTVK + + + GL S+L+R ++ Sbjct: 10 YDKMSELKAFDDTKAGVKGLVDSGITKVPQIFVLPPKD----RAKKCETHFVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAPNPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCF--HLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKDHTSYLHNRGLDGTSALSRYKI 363
BLAST of Cs8g12820.1 vs. DB:SwissProt
Match: ACCH6_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana OX=3702 GN=At1g04350 PE=2 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.886e-108 Identity = 163/358 (45.53%), Postives = 239/358 (66.76%), Query Frame = 1 Query: 88 DYDKEQELKTFDDTKAGVKGLVDSGIQSVPKFFVASSEETCNEKSDLRHTHFNVPIIDLRDIDKDGARCEIVKEIGIASSTWGFFQVVNHDIPQDITDEVIESIRRFNEQPNHVKEKFYSRDKMKKVRFNSNFDLYKARF-ANWRDTLSCLMAXXXXXXXXXXXACREILLKFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFYCHYYPACPERNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHRVLAN-CAGPRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKGYIDFFASAGLPAYSSLTRLRL 1155 ++D E K FD+TK GVKGL+D+ I +P+ F ++K + T F +PIID + +R +IV +I A+S WGFFQV+NH +P ++ E+ + +RRF+E+ VK+ +++RD K+ +NSNFDLY + NWRD+ +C MAP+PP PE+ P ACR + ++SK++ +LG LF+LLSEALGL S+ L +M C G + CHYYP CP+ +LT+G H D FLTILLQ+QIGGLQ+ H + WV++ P+ GALV+N+G+ LQ+I+NDK + EHRVLAN A PR+SVA FF+T P+ ++ PI+ELLS+++P YR +K Y + + GL S L+ ++ Sbjct: 5 EFDSYSERKAFDETKTGVKGLIDAHITEIPRIFCLPQGSLSDKKPFVSTTDFAIPIIDFEGLHV--SREDIVGKIKDAASNWGFFQVINHGVPLNVLQEIQDGVRRFHEEAPEVKKTYFTRDATKRFVYNSNFDLYSSSSCVNWRDSFACYMAPDPPNPEDLPVACRVAMFEYSKHMMRLGDLLFELLSEALGLRSDKLKSMDCMKGLLLLCHYYPPCPQPDLTIGTNNHSDNSFLTILLQDQIGGLQIFHQDCWVDVSPIPGALVINMGDFLQLITNDKVISVEHRVLANRAATPRISVASFFSTSMRPNSTVYGPIKELLSEENPSKYRVIDLKEYTEGYFKKGLDGTSYLSHYKI 360
BLAST of Cs8g12820.1 vs. DB:SwissProt
Match: ACCH8_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 8 OS=Arabidopsis thaliana OX=3702 GN=At3g61400 PE=2 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 2.528e-108 Identity = 176/363 (48.48%), Postives = 244/363 (67.22%), Query Frame = 1 Query: 94 DKEQELKTFDDTKAGVKGLVDSGIQSVPKFFVASSEETCNEKSDLRHTHFNVPIIDLRD-----IDKDGA-RCEIVKEIGIASSTWGFFQVVNHDIPQDITDEVIESIRRFNEQPNHVKEKFYSRDKMKKVRFNSNFDLYKARFANWRDTLSCLMAXXXXXXXXXXXACREILLKFSKYVTKLGQDLFKLLSEALGL-NSNHLTNMGCADGHVFYCHYYPACPERNLTLGHTKHRDPDFLTILLQNQIGGLQVLHD-NHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHRVLAN-CAGPRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKGYIDFFASAGLPAYSSLTRLRL 1155 D+ +L +F++T GVKGLVDSGI+ VP F + K L F +P IDL ++D R +V++IG A+ WGFFQVVNH IP D+ ++V E IR F+EQ +K++FYSRD +K+ + SN DL+ A A+WRDT+ MAP+PP E+ PE C EI+++++K + LG+ +F+LLSEALGL NSNHL +M C+ V + YYP CP+ + TLG +KH D FLTI+LQ +GGLQVLHD +W++IPPV GALVVN+G+LLQ+ISN KF + EHRV+AN A PR+SV CFF+T S +++ PI+ELLS+ +PP YR TT+ + +AS + S+L RL + Sbjct: 10 DRLSQLNSFEETMTGVKGLVDSGIKEVPAMFREPPAILASRKPPLA-LQFTIPTIDLNGGVVYYKNQDSVTRRSMVEKIGDAAEKWGFFQVVNHGIPLDVLEKVKEGIRAFHEQDAELKKRFYSRDHTRKMVYYSNLDLFTAMKASWRDTMCAYMAPDPPTSEDLPEVCGEIMMEYAKEIMNLGELIFELLSEALGLNNSNHLKDMDCSKSLVLFGQYYPPCPQPDHTLGLSKHTDFSFLTIVLQGNLGGLQVLHDKQYWIDIPPVPGALVVNLGDLLQLISNGKFISVEHRVIANRAAEPRISVPCFFSTVMRESHRVYGPIKELLSEQNPPKYRDTTISEFASMYASKEINT-SALLRLEI 370 The following BLAST results are available for this feature:
BLAST of Cs8g12820.1 vs. DB:SwissProt
Analysis Date: 2018-06-07 (C. sinensis v2.0, HZAU CDS) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: C. sinensis v2.0 peptides
Date Performed: 2018-06-21 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Cs8g12820.1_Hzau_Valencia_v1.0 ID=Cs8g12820.1_Hzau_Valencia_v1.0; Name=Cs8g12820.1; organism=Citrus sinensis; type=mRNA; length=1158bpback to top protein sequence of Cs8g12820.1 >Cs8g12820.1_Hzau_Valencia_v2.0-protein ID=Cs8g12820.1_Hzau_Valencia_v2.0-protein; Name=Cs8g12820.1; organism=Citrus sinensis; type=polypeptide; length=386bpback to top protein sequence of Cs8g12820.1_Hzau_Valencia_v1.0 >Cs8g12820.1_Hzau_Valencia_v1.0 ID=Cs8g12820.1_Hzau_Valencia_v1.0; Name=Cs8g12820.1_Hzau_Valencia_v1.0; organism=Citrus sinensis; type=polypeptide; length=386bpback to top mRNA from alignment at chr8:15210655..15212442+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1788bp; location=Sequence derived from: chr8:15210655..15212442+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at chr8:15210655..15212442+ >Cs8g12820.1_Hzau_Valencia_v1.0 ID=Cs8g12820.1_Hzau_Valencia_v1.0; Name=Cs8g12820.1; organism=Citrus sinensis; type=CDS; length=1158bp; location=Sequence derived from: chr8:15210655..15212442+ (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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