Luvunga scandens cv. SYT genome v1.0

Overview
Analysis NameLuvunga scandens cv. SYT genome v1.0
MethodPacBio, Oxford Nanopore (Assembly with SMARTdenovo, miniasm, NextDenovo)
SourceHuazhong Agriculture University
Date performed2024-01-22

 

About the assembly

For this genome, please cite Huang et al, Pangenome analysis provides insight into the evolution of the orange subfamily and a key gene for citric acid accumulation in citrus fruits.  This data was originally downloaded from the Citrus Pan-genome to Breeding Database.  This data is also on NCBI under BioProject PRJNA782409 and the assembly accession number is GCA_030449905.1.  The listed BioSample isolate designation is SYT.

Assembly metrics

Assembly size 343 Mb
Number of scaffolds 1267
N50 3,181,037 bp
Predicted transcripts 43,964
Annotated genes 24,665
Assembly BUSCO score (embryophyta_odb10) 99.0%
Annotation BUSCO score (embryophyta_odb10) 96.0%