DR405962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR405962 vs. ExPASy Swiss-Prot
Match: GALE_NEIMB (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B GN=galE PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.009e-39 Identity = 81/173 (46.82%), Postives = 119/173 (68.79%), Query Frame = 3 Query: 165 KNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 680 K ILVTGG G+IGSHTV+ LL G++ V++DNL N+S + ++K + G + + F++ D+RD+ L +FA+ + +VIHFAGL+AVGESV +P+ Y+DNN+ G++ L E MA G ++VFSSSATVYG P VP TE+ P + +PYG +K +E I D+ ++D W Sbjct: 2 KKILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRLKTITGQE---IPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERILTDIQKADPRW 171 HSP 2 Score: 22.7126 bits (47), Expect = 2.009e-39 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 685 IILLRYFNPV 714 +ILLRYFNP+ Sbjct: 173 MILLRYFNPI 182
BLAST of DR405962 vs. ExPASy Swiss-Prot
Match: GALE_NEIMC (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C GN=galE PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.009e-39 Identity = 81/173 (46.82%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 165 KNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEF-PLEAMNPYGRTKLFIEEICRDVHRSDSEW 680 K ILVTGG G+IGSHTV+ LL G++ V++DNL N+S + ++K + G + + F++ D+RD+ L +FA+ + +VIHFAGL+AVGESV +P+ Y+DNN+ G++ L E MA G +VFSSSATVYG P VP TE+ P + +PYG +K +E I D+ ++D W Sbjct: 2 KKILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRLKTITGQE---IPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVFKIVFSSSATVYGDPGKVPYTEDMQPGDTTSPYGTSKSMVERILSDIQKADPRW 171 HSP 2 Score: 23.483 bits (49), Expect = 2.009e-39 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 685 IILLRYFNPV 714 +ILLRYFNP+ Sbjct: 173 VILLRYFNPI 182
BLAST of DR405962 vs. ExPASy Swiss-Prot
Match: GALE_YEREN (UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 4.443e-39 Identity = 82/164 (50.00%), Postives = 118/164 (71.95%), Query Frame = 3 Query: 168 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRD 656 +IL+TGGAGYIGSHTVL LL G VV+DNL N+S ++A+V ++ G + + F+ D+ D++ L+ +F+ K +VIHFAGL++VGESV+KP+ Y+ NN++G+ITLLE M K L+FSSSATVYG P+ VP TE+ + NPYG +K+ +E+I +D Sbjct: 2 SILITGGAGYIGSHTVLTLLEQGRNVVVLDNLINSSAESLARVSKICGRKPN---FYHGDILDRSCLKLIFSSHKIDSVIHFAGLKSVGESVEKPIEYYQNNVVGSITLLEEMCLANVKKLIFSSSATVYGEPEFVPLTEKARIGGTTNPYGTSKVMVEQILKD 162 HSP 2 Score: 23.483 bits (49), Expect = 4.443e-39 Identity = 10/15 (66.67%), Postives = 10/15 (66.67%), Query Frame = 1 Query: 685 IILLRYFNPVXXXPS 729 I LRYFNPV PS Sbjct: 172 ITALRYFNPVGAHPS 186
BLAST of DR405962 vs. ExPASy Swiss-Prot
Match: GALE_ERWAM (UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.668e-38 Identity = 85/173 (49.13%), Postives = 116/173 (67.05%), Query Frame = 3 Query: 168 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEWK 683 +ILVTGGAGYIGSHTVL LL G V++DNL NAS ++ +V++L G TF + DL D++ L ++F+ + AVIHFAGL+AVG S +KPL Y+ NN+ GT+ LLE M + G +FSSSATVYG VP E P+ +PYG +KL +E+I RD +++ E+K Sbjct: 2 SILVTGGAGYIGSHTVLSLLQRGDDVVILDNLSNASRESINRVEKLTGKTA---TFFEGDLLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAGVNQFIFSSSATVYGADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKANPEFK 171 HSP 2 Score: 22.3274 bits (46), Expect = 1.668e-38 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 1 Query: 682 KIILLRYFNPV 714 K I LRYFNPV Sbjct: 171 KTIALRYFNPV 181
BLAST of DR405962 vs. ExPASy Swiss-Prot
Match: GALE_DROME (Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=CG12030 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.735e-38 Identity = 84/177 (47.46%), Postives = 116/177 (65.54%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEI------AVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 680 +LVTGGAGYIGSHTVL++L GY + VDNL NA A+++V+E+ G + + F+++D+ D+ + ++F + K V HFA L+AVGES + PL Y+ NN+ GT LLE MA + V+SSSATVYG PK +P TEE P +PYG+TK F EEI +D+ +SD W Sbjct: 6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKK---VNFYRVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNVFKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRW 179
BLAST of DR405962 vs. ExPASy Swiss-Prot
Match: GALE_SALTI (UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 4.804e-38 Identity = 80/179 (44.69%), Postives = 113/179 (63.13%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEWKDHIAEIF 704 +LVTGG+GYIGSHT +QLL G+ V++DNL N+ + ++ L G + TF + D+R++A + + VIHFAGL+AVGESV KPL Y+DNN+ GT+ L+ M A KNL+FSSSATVYG +P E FP +PYG++KL +E+I D+ ++ EW + F Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGK---HPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLVSAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYF 178 HSP 2 Score: 25.409 bits (54), Expect = 4.804e-38 Identity = 11/15 (73.33%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 685 IILLRYFNPVXXXPS 729 I LLRYFNPV PS Sbjct: 172 IALLRYFNPVGAHPS 186
BLAST of DR405962 vs. ExPASy Swiss-Prot
Match: GALE_ECOLI (UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.258e-38 Identity = 78/179 (43.58%), Postives = 113/179 (63.13%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEWKDHIAEIF 704 +LVTGG+GYIGSHT +QLL G+ +++DNL N+ + ++ L G + TF + D+R++A + + VIHFAGL+AVGESVQKPL Y+DNN+ GT+ L+ M A KN +FSSSATVYG +P E FP +PYG++KL +E+I D+ ++ +W + F Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK---HPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYF 178 HSP 2 Score: 25.409 bits (54), Expect = 6.258e-38 Identity = 11/15 (73.33%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 685 IILLRYFNPVXXXPS 729 I LLRYFNPV PS Sbjct: 172 IALLRYFNPVGAHPS 186
BLAST of DR405962 vs. ExPASy Swiss-Prot
Match: GALE_PASMU (UDP-glucose 4-epimerase OS=Pasteurella multocida GN=galE PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.062e-37 Identity = 83/179 (46.37%), Postives = 120/179 (67.04%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEWKDHIAEIF 704 ILVTGGAGYIGSHTV++LL VV+DNL N+S ++ +V ++ G Q + F++ D+ D A L+ +FA+ + +VIHFAGL+AVGESVQKP Y+ NN+ G++ L++ M G N VFSSSATVYG P+++P TE + NPYG +K +E+I +D+ ++ E+ I F Sbjct: 3 ILVTGGAGYIGSHTVVELLNANKDVVVLDNLCNSSPKSLERVAQITGKQ---VKFYQGDILDTALLQKIFAENQIQSVIHFAGLKAVGESVQKPAEYYMNNVTGSLVLIQEMKKAGVWNFVFSSSATVYGDPEIIPITESCKVGGTTNPYGTSKFMVEQILKDIAKATPEFSITILRYF 178 HSP 2 Score: 21.557 bits (44), Expect = 1.062e-37 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 685 IILLRYFNPV 714 I +LRYFNPV Sbjct: 172 ITILRYFNPV 181
BLAST of DR405962 vs. ExPASy Swiss-Prot
Match: GALE_SALTY (UDP-glucose 4-epimerase OS=Salmonella typhimurium GN=galE PE=3 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.062e-37 Identity = 79/179 (44.13%), Postives = 113/179 (63.13%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEWKDHIAEIF 704 +LVTGG+GYIGSHT +QLL G+ V++DNL N+ + ++ L G + TF + D+R++A + + VIHFAGL+AVGESV +PL Y+DNN+ GT+ L+ M A KNL+FSSSATVYG +P E FP +PYG++KL +E+I D+ ++ EW + F Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGK---HPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVARPLEYYDNNVNGTLRLVSAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYF 178 HSP 2 Score: 25.409 bits (54), Expect = 1.062e-37 Identity = 11/15 (73.33%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 685 IILLRYFNPVXXXPS 729 I LLRYFNPV PS Sbjct: 172 IALLRYFNPVGAHPS 186
BLAST of DR405962 vs. ExPASy Swiss-Prot
Match: GALE_NEIGO (UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.148e-36 Identity = 74/171 (43.27%), Postives = 113/171 (66.08%), Query Frame = 3 Query: 171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEF-PLEAMNPYGRTKLFIEEICRDVHRSDSEW 680 +L+TGG G+IGSHT + L+ GY V++DNL N+S + +++++ G N+ F++ D+RD L +F++ + +VIHFAGL+AVGESV +P Y+ NN+ G++ L E MA G +VFSSSATVYG + VP TE+ P + NPYG +K +E + D+ ++D W Sbjct: 3 VLITGGTGFIGSHTAVSLVQSGYDAVILDNLCNSSAAVLPRLRQITGR---NIPFYQGDIRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVYGSLVLAEEMARAGVLKIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPRW 170 HSP 2 Score: 23.483 bits (49), Expect = 1.148e-36 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 685 IILLRYFNPV 714 +ILLRYFNP+ Sbjct: 172 VILLRYFNPI 181 The following BLAST results are available for this feature:
BLAST of DR405962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405962 ID=DR405962; Name=DR405962; organism=Citrus sinensis; type=EST; length=729bpback to top |