DN135214

Overview
NameDN135214
Unique NameDN135214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_VIBVU (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus GN=fadJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.869e-13
Identity = 48/172 (27.91%), Postives = 83/172 (48.26%), Query Frame = 3
Query:   12 FLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            F  E     + L  +  +  +++ S   D+F +G D++ L +      +    R  ++  + +  L            PV+A+IHG C+GGG+++  ACD R CS D      + EV L +    G  QRLP ++G   +++L LTG++    +AK+LG+V      +  LD
Sbjct:   35 FADEMKAIFAQLKDSSGLKGLIVHSLKPDNFVAGADVRMLEACKTAPEAEALARQGQELFQQLSDLP----------YPVVAAIHGPCLGGGLELALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRANKAKKLGVVDACVPQTILLD 196          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_VIBPA (Fatty acid oxidation complex subunit alpha OS=Vibrio parahaemolyticus GN=fadJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.869e-13
Identity = 48/172 (27.91%), Postives = 87/172 (50.58%), Query Frame = 3
Query:   12 FLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCS--KDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            F  E  +  + L  +  +  +++ S   D+F +G D++ L + T   T+ +    +++ +   + L D          PV+A+IHG C+GGG+++  ACD R C+        + EV L +    G  QRLP ++G   +++L LTG++    +AK+LG+V      +  LD
Sbjct:   35 FADEMKEIFAQLKDSSGIKGMIIHSLKPDNFVAGADVRMLEACT---TANEAQALAKQGQELFQQLSDLPY-------PVVAAIHGPCLGGGLELALACDYRVCTDFDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLGVVDACVPDTILLD 196          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_PROSL (Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 2.869e-13
Identity = 47/156 (30.13%), Postives = 75/156 (48.08%), Query Frame = 3
Query:   54 NPNVNAIVLSGTGDHF-CSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            +P++   +++G G+ F C+G DLK  +           G F+             +T +    KPVIA+I+G   GGG ++  A D+  CS +A F++ E  L I  D G + RLP  +      E+ +TGRR    EA   G+ +RV   +  +D
Sbjct:   44 DPSLRVAIITGAGERFFCAGWDLKAAAEGEAPDADFGAGGFA------------GLTELFDLNKPVIAAINGYAFGGGFELALAADMIICSDNASFALPEAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATELMD 187          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_PROMH (Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320) GN=caiD PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.869e-13
Identity = 47/156 (30.13%), Postives = 75/156 (48.08%), Query Frame = 3
Query:   54 NPNVNAIVLSGTGDHF-CSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            +P++   +++G G+ F C+G DLK  +           G F+             +T +    KPVIA+I+G   GGG ++  A D+  CS +A F++ E  L I  D G + RLP  +      E+ +TGRR    EA   G+ +RV   +  +D
Sbjct:   44 DPSLRVAIITGAGERFFCAGWDLKAAAEGEAPDADFGAGGFA------------GLTELFDLNKPVIAAINGYAFGGGFELALAADMIICSDNASFALPEAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATELMD 187          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHP_MOUSE (Peroxisomal bifunctional enzyme OS=Mus musculus GN=Ehhadh PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 4.893e-13
Identity = 49/160 (30.63%), Postives = 72/160 (45.00%), Query Frame = 3
Query:   15 LSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494
            ++E    L     +  V AIV+ G  D+FC+G D+    S T  T                  L   V  I+R +KPV+A+I G  +GGG+++   C  R  +  A     EV L I       Q LP +VG   A++L  +GR     EA +LG++  V
Sbjct:   29 ITEVRNGLQKASLDHTVRAIVICGANDNFCAGADIHGFKSPTGLT------------------LGSLVDEIQRYQKPVVAAIQGVALGGGLELALGCHYRIANAKARVGFPEVMLGILPGARGTQLLPRVVGVPVALDLITSGRHISTDEALKLGILDVV 170          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_ECOLI (Carnitinyl-CoA dehydratase OS=Escherichia coli (strain K12) GN=caiD PE=1 SV=4)

HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13
Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 3
Query:   21 EFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            E  +   +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+ +A F++ E  L I  D G + RLP I+      E+ +TGRR    EA   G+V+RV   +  +D
Sbjct:   33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMD 187          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_ECOLC (Carnitinyl-CoA dehydratase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=caiD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13
Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 3
Query:   21 EFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            E  +   +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+ +A F++ E  L I  D G + RLP I+      E+ +TGRR    EA   G+V+RV   +  +D
Sbjct:   33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMD 187          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_ECO57 (Carnitinyl-CoA dehydratase OS=Escherichia coli O157:H7 GN=caiD PE=3 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13
Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 3
Query:   21 EFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            E  +   +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+ +A F++ E  L I  D G + RLP I+      E+ +TGRR    EA   G+V+RV   +  +D
Sbjct:   33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMD 187          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CDYL2_HUMAN (Chromodomain Y-like protein 2 OS=Homo sapiens GN=CDYL2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 51/163 (31.29%), Postives = 80/163 (49.08%), Query Frame = 3
Query:    9 EFLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVF 497
            E + E  +AL +   + +   ++LS  G  FCSG+D   L        S+DR + S +    IR   D V A  + +KP++ +I+G  +G G  I+  CDI + S+ A+F      + +T    +    P I+G   A E+   GR+    EA   GLVS+VF
Sbjct:  278 EIMKEVRRALCNAATDDS-KLLLLSAVGSVFCSGLDYSYLIG----RLSSDRRKESTRIAEAIR---DFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRGLVSQVF 432          
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_SALPK (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain AKU_12601) GN=caiD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 3
Query:   30 KALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            +A  +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+++A F++ E  L I  D G + RLP ++      E+ +TGRR    EA   G+V+RV   S  +D
Sbjct:   36 EAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMD 187          
The following BLAST results are available for this feature:
BLAST of DN135214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
FADJ_VIBVU2.869e-1327.91Fatty acid oxidation complex subunit alpha OS=Vibr... [more]
FADJ_VIBPA2.869e-1327.91Fatty acid oxidation complex subunit alpha OS=Vibr... [more]
CAID_PROSL2.869e-1330.13Carnitinyl-CoA dehydratase OS=Proteus sp. (strain ... [more]
CAID_PROMH2.869e-1330.13Carnitinyl-CoA dehydratase OS=Proteus mirabilis (s... [more]
ECHP_MOUSE4.893e-1330.63Peroxisomal bifunctional enzyme OS=Mus musculus GN... [more]
CAID_ECOLI6.391e-1329.34Carnitinyl-CoA dehydratase OS=Escherichia coli (st... [more]
CAID_ECOLC6.391e-1329.34Carnitinyl-CoA dehydratase OS=Escherichia coli (st... [more]
CAID_ECO576.391e-1329.34Carnitinyl-CoA dehydratase OS=Escherichia coli O15... [more]
CDYL2_HUMAN8.347e-1331.29Chromodomain Y-like protein 2 OS=Homo sapiens GN=C... [more]
CAID_SALPK8.347e-1329.88Carnitinyl-CoA dehydratase OS=Salmonella paratyphi... [more]

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Properties
Property NameValue
Genbank descriptionwca07h11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07h11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135214 ID=DN135214; Name=DN135214; organism=Citrus sinensis; type=EST; length=521bp
GGGGACGTGAATTCCTCTCTGAATTCCCTAAGGCCTTATCTTCCCTCGAC
CAAAATCCTAACGTCAACGCCATCGTCCTCTCAGGCACCGGCGACCACTT
CTGCTCCGGAATCGATCTGAAAACACTAAGTTCGGTCACCGACCATACCA
CTTCCACCGACCGCGGCCGCTTCTCCGAGAAGTTCCGGCGAGATATCAGG
TTCTTGCAGGATGCGGTAACTGCCATCGAGCGATGTCGGAAGCCAGTCAT
CGCATCTATCCACGGGGCGTGTATCGGAGGCGGCGTCGATATTGTCACTG
CCTGTGATATTCGGTTCTGTTCAAAAGATGCTTTTTTTTCGGTCAAAGAG
GTTGACTTGGCTATCACGGCAGATCTCGGGACTTTACAGAGGCTTCCGGC
GATTGTCGGGTATGGTAACGCGATGGAATTGGCGTTGACGGGTCGTAGGT
TTTGGGGTTTGGAGGCTAAGGAGTTGGGTCTGGTTTCTCGGGTTTTCGGG
ACGAGTTATGAATTGGATCAG
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