DN135214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_VIBVU (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus GN=fadJ PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.869e-13 Identity = 48/172 (27.91%), Postives = 83/172 (48.26%), Query Frame = 3 Query: 12 FLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 F E + L + + +++ S D+F +G D++ L + + R ++ + + L PV+A+IHG C+GGG+++ ACD R CS D + EV L + G QRLP ++G +++L LTG++ +AK+LG+V + LD Sbjct: 35 FADEMKAIFAQLKDSSGLKGLIVHSLKPDNFVAGADVRMLEACKTAPEAEALARQGQELFQQLSDLP----------YPVVAAIHGPCLGGGLELALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRANKAKKLGVVDACVPQTILLD 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADJ_VIBPA (Fatty acid oxidation complex subunit alpha OS=Vibrio parahaemolyticus GN=fadJ PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.869e-13 Identity = 48/172 (27.91%), Postives = 87/172 (50.58%), Query Frame = 3 Query: 12 FLSEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCS--KDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 F E + + L + + +++ S D+F +G D++ L + T T+ + +++ + + L D PV+A+IHG C+GGG+++ ACD R C+ + EV L + G QRLP ++G +++L LTG++ +AK+LG+V + LD Sbjct: 35 FADEMKEIFAQLKDSSGIKGMIIHSLKPDNFVAGADVRMLEACT---TANEAQALAKQGQELFQQLSDLPY-------PVVAAIHGPCLGGGLELALACDYRVCTDFDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLGVVDACVPDTILLD 196
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_PROSL (Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD PE=1 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 2.869e-13 Identity = 47/156 (30.13%), Postives = 75/156 (48.08%), Query Frame = 3 Query: 54 NPNVNAIVLSGTGDHF-CSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 +P++ +++G G+ F C+G DLK + G F+ +T + KPVIA+I+G GGG ++ A D+ CS +A F++ E L I D G + RLP + E+ +TGRR EA G+ +RV + +D Sbjct: 44 DPSLRVAIITGAGERFFCAGWDLKAAAEGEAPDADFGAGGFA------------GLTELFDLNKPVIAAINGYAFGGGFELALAADMIICSDNASFALPEAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATELMD 187
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_PROMH (Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320) GN=caiD PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.869e-13 Identity = 47/156 (30.13%), Postives = 75/156 (48.08%), Query Frame = 3 Query: 54 NPNVNAIVLSGTGDHF-CSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 +P++ +++G G+ F C+G DLK + G F+ +T + KPVIA+I+G GGG ++ A D+ CS +A F++ E L I D G + RLP + E+ +TGRR EA G+ +RV + +D Sbjct: 44 DPSLRVAIITGAGERFFCAGWDLKAAAEGEAPDADFGAGGFA------------GLTELFDLNKPVIAAINGYAFGGGFELALAADMIICSDNASFALPEAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATELMD 187
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHP_MOUSE (Peroxisomal bifunctional enzyme OS=Mus musculus GN=Ehhadh PE=1 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 4.893e-13 Identity = 49/160 (30.63%), Postives = 72/160 (45.00%), Query Frame = 3 Query: 15 LSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494 ++E L + V AIV+ G D+FC+G D+ S T T L V I+R +KPV+A+I G +GGG+++ C R + A EV L I Q LP +VG A++L +GR EA +LG++ V Sbjct: 29 ITEVRNGLQKASLDHTVRAIVICGANDNFCAGADIHGFKSPTGLT------------------LGSLVDEIQRYQKPVVAAIQGVALGGGLELALGCHYRIANAKARVGFPEVMLGILPGARGTQLLPRVVGVPVALDLITSGRHISTDEALKLGILDVV 170
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_ECOLI (Carnitinyl-CoA dehydratase OS=Escherichia coli (strain K12) GN=caiD PE=1 SV=4) HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13 Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 3 Query: 21 EFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 E + + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+ +A F++ E L I D G + RLP I+ E+ +TGRR EA G+V+RV + +D Sbjct: 33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMD 187
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_ECOLC (Carnitinyl-CoA dehydratase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=caiD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13 Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 3 Query: 21 EFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 E + + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+ +A F++ E L I D G + RLP I+ E+ +TGRR EA G+V+RV + +D Sbjct: 33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMD 187
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_ECO57 (Carnitinyl-CoA dehydratase OS=Escherichia coli O157:H7 GN=caiD PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13 Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 3 Query: 21 EFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 E + + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+ +A F++ E L I D G + RLP I+ E+ +TGRR EA G+V+RV + +D Sbjct: 33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMD 187
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CDYL2_HUMAN (Chromodomain Y-like protein 2 OS=Homo sapiens GN=CDYL2 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13 Identity = 51/163 (31.29%), Postives = 80/163 (49.08%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVF 497 E + E +AL + + + ++LS G FCSG+D L S+DR + S + IR D V A + +KP++ +I+G +G G I+ CDI + S+ A+F + +T + P I+G A E+ GR+ EA GLVS+VF Sbjct: 278 EIMKEVRRALCNAATDDS-KLLLLSAVGSVFCSGLDYSYLIG----RLSSDRRKESTRIAEAIR---DFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRGLVSQVF 432
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_SALPK (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain AKU_12601) GN=caiD PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13 Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 3 Query: 30 KALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518 +A + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+++A F++ E L I D G + RLP ++ E+ +TGRR EA G+V+RV S +D Sbjct: 36 EAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMD 187 The following BLAST results are available for this feature:
BLAST of DN135214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135214 ID=DN135214; Name=DN135214; organism=Citrus sinensis; type=EST; length=521bpback to top |