DN135214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECH1_HUMAN (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo sapiens GN=ECH1 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 1.563e-35 Identity = 78/163 (47.85%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 12 FLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVF 497 F E + + + ++ + A+V+SG G F +GIDL ++S D R S R I Q+ IERC KPVIA++HG CIGGGVD+VTACDIR+C++DAFF VKEVD+ + AD+GTLQRLP ++G + + ELA T R+ EA GLVSRVF Sbjct: 85 FWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVF 247
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECH1_MOUSE (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus GN=Ech1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.042e-35 Identity = 76/165 (46.06%), Postives = 105/165 (63.64%), Query Frame = 3 Query: 6 REFLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVF 497 R F E + + ++ + A+V+SG G F SGIDL ++S + D R + R I Q T IE+C KPVIA+IHG CIGGGVD+V+ACDIR+C++DAFF +KEVD+ + AD+GTLQRLP ++G + + EL + R+ EA + GLVSRVF Sbjct: 82 RAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASELMQPSGDDAARIAWYLRDLISKYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLVSACDIRYCTQDAFFQIKEVDMGLAADVGTLQRLPKVIGNQSLVNELTFSARKMMADEALDSGLVSRVF 246
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECH1_RAT (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus GN=Ech1 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 4.548e-35 Identity = 77/165 (46.67%), Postives = 104/165 (63.03%), Query Frame = 3 Query: 6 REFLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVF 497 R F E + + ++ + A+V+SG G F SGIDL ++S D R + R I Q T IE+C KPVIA+IHG CIGGGVD+++ACDIR+C++DAFF VKEVD+ + AD+GTLQRLP ++G + + EL T R+ EA + GLVSRVF Sbjct: 82 RAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVF 246
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECH1_PONAB (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo abelii GN=ECH1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.548e-35 Identity = 76/163 (46.63%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 12 FLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVF 497 F E + + + ++ + A+V+SG G F +G+DL ++S D R S R I Q+ IE+C KPVIA++HG CIGGGVD+VTACDIR+C++DAFF VKEVD+ + AD+GTLQRLP ++G + + ELA T R+ EA GLVSRVF Sbjct: 85 FWREMVECFNKISRDADCRAVVISGAGKMFTAGVDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIEKCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVF 247
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECH1_DICDI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Dictyostelium discoideum GN=ech1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.674e-29 Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVF 497 +F +EF + + + ++L G G +G++L ++ + + + + + + IR Q ++ I +C KP IA IHGACIGGGVD++TACDIR CS DA FS++E L+I ADLGTLQR+ IVG G A ELALTG+ A+ LV+ V+ Sbjct: 52 DFYNEFISIYDEIQNDSKIRCVILRGEGKGLTAGLNLGKIAPLITGDSEVSQSQNNLDLFKMIRRWQASLDKINKCSKPTIALIHGACIGGGVDMITACDIRLCSSDAKFSIRETKLSIIADLGTLQRISKIVGSGFARELALTGKDIDAKTAERFNLVNHVY 214
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: YNGF_BACSU (Putative enoyl-CoA hydratase/isomerase yngF OS=Bacillus subtilis GN=yngF PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.191e-21 Identity = 54/163 (33.13%), Postives = 86/163 (52.76%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494 E L + ++ N N+ ++L+GTG+ FC+G DLK + + ++ + +Q ++ +PVIA+I+G+ +GGG+++ ACD+R ++ A + E LAI G QRLP ++G G A E TGRR EAKE+GLV V Sbjct: 31 EMLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCAGADLKERIKLKE-----------DQVLESVSLIQRTAALLDALPQPVIAAINGSALGGGLELALACDLRIATEAAVLGLPETGLAIIPGAGGTQRLPRLIGRGKAKEFIYTGRRVTAHEAKEIGLVEHV 182
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: FADB_BACSU (Probable enoyl-CoA hydratase OS=Bacillus subtilis GN=fadB PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.018e-18 Identity = 56/161 (34.78%), Postives = 83/161 (51.55%), Query Frame = 3 Query: 15 LSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTST---DRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVS 488 L E L + + V +I++ G G F +G D+K +S+ + S+ +RG Q + IE KP+IA+IHGA +GGG+++ AC IR ++DA + E++L I QRLP VG A+EL +G G EA +LGLVS Sbjct: 30 LEELSSCLDQCETDAGVRSIIIHGEGRFFSAGADIKEFTSLKGNEDSSLLAERG-------------QQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPELNLGIIPGFAGTQRLPRYVGTAKALELIGSGEPISGKEALDLGLVS 177
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECH12_MYCBO (Probable enoyl-CoA hydratase echA12 OS=Mycobacterium bovis GN=echA12 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.330e-18 Identity = 55/155 (35.48%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 30 KALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITA-DLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSR 491 +AL+ + + +V +VL+G G F SG D K+ + V H + R ++ R + L D + + R +PVIA+++G IGGG+ + A DIR S A+F ++ +TA +LG LP +G A E+ LTGR EA+ +GLVSR Sbjct: 53 EALAQVSYDNSVRVVVLTGAGRGFSSGADHKS-AGVVPHVENLTRPTYA---LRSMELLDDVILMLRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVSAEEAERIGLVSR 203
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHM_MOUSE (Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.736e-18 Identity = 58/161 (36.02%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 15 LSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVF 497 + E +AL + +Q+P V AIVL+G F +G D+K + + T + +S KF D +T R +KPVIA+++G +GGG ++ CDI + + A F E+ L G QRL VG AME+ LTG R +AK+ GLVS++F Sbjct: 66 IEELNQALETFEQDPAVGAIVLTGGDKAFAAGADIKEMQN------RTFQDCYSSKFLSH----WDHIT---RVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIF 213
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCTU (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis GN=echA8 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.268e-18 Identity = 51/162 (31.48%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 9 EFLSEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 494 + ++E A + LD +P++ AI+++G+ F +G D+K ++ +T F++ F D + A+ R P IA++ G +GGG ++ CD+ + A F E+ L + +G QRL +G AM+L LTGR EA+ GLVSRV Sbjct: 31 QVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLT----------FADAFTADFFATWGKLAAV---RTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRV 179 The following BLAST results are available for this feature:
BLAST of DN135214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135214 ID=DN135214; Name=DN135214; organism=Citrus sinensis; type=EST; length=521bpback to top |