DN135214

Overview
NameDN135214
Unique NameDN135214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_SALPC (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi C (strain RKS4594) GN=caiD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 3 
Query:   30 KALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            +A  +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+++A F++ E  L I  D G + RLP ++      E+ +TGRR    EA   G+V+RV   S  +D
Sbjct:   36 EAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMD 187
[Close]
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_SALPA (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A GN=caiD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 3 
Query:   30 KALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            +A  +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+++A F++ E  L I  D G + RLP ++      E+ +TGRR    EA   G+V+RV   S  +D
Sbjct:   36 EAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMD 187
[Close]
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_SALG2 (Carnitinyl-CoA dehydratase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=caiD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 3 
Query:   30 KALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            +A  +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+++A F++ E  L I  D G + RLP ++      E+ +TGRR    EA   G+V+RV   S  +D
Sbjct:   36 EAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGSGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMD 187
[Close]
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_SALEP (Carnitinyl-CoA dehydratase OS=Salmonella enteritidis PT4 (strain P125109) GN=caiD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 3 
Query:   30 KALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            +A  +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+++A F++ E  L I  D G + RLP ++      E+ +TGRR    EA   G+V+RV   S  +D
Sbjct:   36 EAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGSGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMD 187
[Close]
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_SALCH (Carnitinyl-CoA dehydratase OS=Salmonella choleraesuis GN=caiD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 3 
Query:   30 KALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            +A  +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+++A F++ E  L I  D G + RLP ++      E+ +TGRR    EA   G+V+RV   S  +D
Sbjct:   36 EAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMD 187
[Close]
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_SALA4 (Carnitinyl-CoA dehydratase OS=Salmonella agona (strain SL483) GN=caiD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 3 
Query:   30 KALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            +A  +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+++A F++ E  L I  D G + RLP ++      E+ +TGRR    EA   G+V+RV   S  +D
Sbjct:   36 EAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMD 187
[Close]
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_ECOSM (Carnitinyl-CoA dehydratase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=caiD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 3 
Query:   21 EFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            E  +   +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+ +A F++ E  L I  D G + RLP I+      E+ +TGRR    EA   G+V+RV   +  +D
Sbjct:   33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMD 187
[Close]
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_ECOL6 (Carnitinyl-CoA dehydratase OS=Escherichia coli O6 GN=caiD PE=3 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 3 
Query:   21 EFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            E  +   +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+ +A F++ E  L I  D G + RLP I+      E+ +TGRR    EA   G+V+RV   +  +D
Sbjct:   33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMD 187
[Close]
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_ECOL5 (Carnitinyl-CoA dehydratase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=caiD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 3 
Query:   21 EFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            E  +   +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+ +A F++ E  L I  D G + RLP I+      E+ +TGRR    EA   G+V+RV   +  +D
Sbjct:   33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMD 187
[Close]
BLAST of DN135214 vs. ExPASy Swiss-Prot
Match: CAID_SHIFL (Carnitinyl-CoA dehydratase OS=Shigella flexneri GN=caiD PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.090e-12
Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 3 
Query:   21 EFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 518
            E  +   +   +P +   +++G G+ F S G DLK  +           G F+             +T I    KPVIA+++G   GGG ++  A D   C+ +A F++ E  L I  D G + RLP I+      E+ +TGRR    EA   G+V+RV   +  +D
Sbjct:   33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPTIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMD 187
The following BLAST results are available for this feature:
BLAST of DN135214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CAID_SALPC8.347e-1329.88Carnitinyl-CoA dehydratase OS=Salmonella paratyphi... [more]
CAID_SALPA8.347e-1329.88Carnitinyl-CoA dehydratase OS=Salmonella paratyphi... [more]
CAID_SALG28.347e-1329.88Carnitinyl-CoA dehydratase OS=Salmonella gallinaru... [more]
CAID_SALEP8.347e-1329.88Carnitinyl-CoA dehydratase OS=Salmonella enteritid... [more]
CAID_SALCH8.347e-1329.88Carnitinyl-CoA dehydratase OS=Salmonella choleraes... [more]
CAID_SALA48.347e-1329.88Carnitinyl-CoA dehydratase OS=Salmonella agona (st... [more]
CAID_ECOSM8.347e-1329.34Carnitinyl-CoA dehydratase OS=Escherichia coli (st... [more]
CAID_ECOL68.347e-1329.34Carnitinyl-CoA dehydratase OS=Escherichia coli O6 ... [more]
CAID_ECOL58.347e-1329.34Carnitinyl-CoA dehydratase OS=Escherichia coli O6:... [more]
CAID_SHIFL1.090e-1229.34Carnitinyl-CoA dehydratase OS=Shigella flexneri GN... [more]

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Properties
Property NameValue
Genbank descriptionwca07h11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07h11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135214 ID=DN135214; Name=DN135214; organism=Citrus sinensis; type=EST; length=521bp
GGGGACGTGAATTCCTCTCTGAATTCCCTAAGGCCTTATCTTCCCTCGAC
CAAAATCCTAACGTCAACGCCATCGTCCTCTCAGGCACCGGCGACCACTT
CTGCTCCGGAATCGATCTGAAAACACTAAGTTCGGTCACCGACCATACCA
CTTCCACCGACCGCGGCCGCTTCTCCGAGAAGTTCCGGCGAGATATCAGG
TTCTTGCAGGATGCGGTAACTGCCATCGAGCGATGTCGGAAGCCAGTCAT
CGCATCTATCCACGGGGCGTGTATCGGAGGCGGCGTCGATATTGTCACTG
CCTGTGATATTCGGTTCTGTTCAAAAGATGCTTTTTTTTCGGTCAAAGAG
GTTGACTTGGCTATCACGGCAGATCTCGGGACTTTACAGAGGCTTCCGGC
GATTGTCGGGTATGGTAACGCGATGGAATTGGCGTTGACGGGTCGTAGGT
TTTGGGGTTTGGAGGCTAAGGAGTTGGGTCTGGTTTCTCGGGTTTTCGGG
ACGAGTTATGAATTGGATCAG
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