CN182006
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182006 vs. ExPASy Swiss-Prot
Match: CRIP2_PONAB (Cysteine-rich protein 2 OS=Pongo abelii GN=CRIP2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 49/167 (29.34%), Postives = 78/167 (46.71%), Query Frame = 2 Query: 287 KCKVCEKTVYPVEQLSADGVVYHKSCFKCSHCKGTLKLSNYSSMEGVLYC-KPHFEQLF-----KESGNFNKNFQSP---------------AKSAEKLTPELTRSPSKAASM--FSGTQEKCASCSKTVYPLEKVAVENQAYHKTCFKCSHGGCSISPSNYAALEG 718 KC C+KTV E++S+ G +HK C KC C TL ++ +G +C KP + LF G + ++ P A++ E+ + PS+A+S+ F+G C CSK VY EKV + +H+ C C G +++P +A +G Sbjct: 4 KCPKCDKTVCFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLHCERCGKTLTPGGHAEHDG 170
BLAST of CN182006 vs. ExPASy Swiss-Prot
Match: MLP2_DROME (Muscle LIM protein Mlp84B OS=Drosophila melanogaster GN=Mlp84B PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11 Identity = 44/146 (30.14%), Postives = 64/146 (43.84%), Query Frame = 2 Query: 287 KCKVCEKTVYPVEQLSADGVVYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKESGN-----------------FNKNFQSPA-KSAEKLTPE-LTRSPSKAASMFSGTQEKCASCSKTVYPLEKVAVENQAYHKTCFKC 667 KC C K+VY E+ A G V+HK+CFKC C +L +N + E LYCK + F G +N P+ ++ +L P + R+P E C C VY E++ +++HK CFKC Sbjct: 11 KCPRCGKSVYAAEERLAGGYVFHKNCFKCGMCNKSLDSTNCTEHERELYCKTCHGRKFGPKGYGFGTGAGTLSMDNGSQFLRENGDVPSVRNGARLEPRAIARAPE---------GEGCPRCGGYVYAAEQMLARGRSWHKECFKC 147
BLAST of CN182006 vs. ExPASy Swiss-Prot
Match: MICA2_HUMAN (Protein MICAL-2 OS=Homo sapiens GN=MICAL2 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 2 Query: 245 SKDLKAM--SF---IGTQQKCKVCEKTVYPVEQLSADGVVYHKSCFKCSHCKGTLKLSNYS--SMEGVLYCKPHFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAASMFSGTQEKCA 589 S DL++M SF +G C C+K VY +E+LSA+G +H+ CF+CS C TL+L+ Y+ EG YCKPHF S K + A+ ++ E T +A + T+ CA Sbjct: 982 SPDLESMRKSFPLNLGGSDTCYFCKKRVYVMERLSAEGHFFHRECFRCSICATTLRLAAYTFDCDEGKFYCKPHFIHCKTNS----KQRKRRAELKQQREEEATWQEQEAPRRDTPTESSCA 1099
BLAST of CN182006 vs. ExPASy Swiss-Prot
Match: MICA3_HUMAN (Protein MICAL-3 OS=Homo sapiens GN=MICAL3 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 272 IGTQQKCKVCEKTVYPVEQLSADGVVYHKSCFKCSHCKGTLKLSNYS--SMEGVLYCKPHF 448 +G C C+K VY +E+LSA+G +H+SCFKC +C TL+LS Y+ +G YCKPH+ Sbjct: 786 LGGSDTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 846
BLAST of CN182006 vs. ExPASy Swiss-Prot
Match: MICA2_MOUSE (Protein MICAL-2 OS=Mus musculus GN=Mical2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11 Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 272 IGTQQKCKVCEKTVYPVEQLSADGVVYHKSCFKCSHCKGTLKLSNYS--SMEGVLYCKPHF 448 +G + C C+K VY +E+LSA+G +H+ CF+CS C TL+L+ Y+ EG YCKPHF Sbjct: 747 LGGRDTCYFCKKRVYMIERLSAEGHFFHQECFRCSVCSATLRLAAYAFDCDEGKFYCKPHF 807 The following BLAST results are available for this feature:
BLAST of CN182006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182006 ID=CN182006; Name=CN182006; organism=Citrus sinensis; type=EST; length=723bpback to top |