Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG077_23583997_2358399marker_locus10.32 cM
Citrus-P.trifoliata-consensus-2018.LG077_20153547_2015354marker_locus11.57 cM
Citrus-P.trifoliata-consensus-2018.LG077_25059767_2505976marker_locus14.5 cM
Citrus-P.trifoliata-consensus-2018.LG077_28906277_2890627marker_locus18.48 cM
Citrus-P.trifoliata-consensus-2018.LG077_32936567_3293656marker_locus21.73 cM
Citrus-P.trifoliata-consensus-2018.LG077_35042657_3504265marker_locus23.86 cM
Citrus-P.trifoliata-consensus-2018.LG077_39189667_3918966marker_locus27.11 cM
Citrus-P.trifoliata-consensus-2018.LG077_41184777_4118477marker_locus30.36 cM
Citrus-P.trifoliata-consensus-2018.LG077_44032237_4403223marker_locus32.96 cM
Citrus-P.trifoliata-consensus-2018.LG077_48788087_4878808marker_locus37.68 cM
Citrus-P.trifoliata-consensus-2018.LG077_58476547_5847654marker_locus42 cM
Citrus-P.trifoliata-consensus-2018.LG077_64004747_6400474marker_locus45.13 cM
Citrus-P.trifoliata-consensus-2018.LG077_63897787_6389778marker_locus47.08 cM
Citrus-P.trifoliata-consensus-2018.LG077_73429957_7342995marker_locus50.28 cM
Citrus-P.trifoliata-consensus-2018.LG077_67688347_6768834marker_locus51.04 cM
Citrus-P.trifoliata-consensus-2018.LG077_70239447_7023944marker_locus51.38 cM
Citrus-P.trifoliata-consensus-2018.LG077_79478707_7947870marker_locus52.62 cM
Citrus-P.trifoliata-consensus-2018.LG077_85072897_8507289marker_locus54.74 cM
Citrus-P.trifoliata-consensus-2018.LG077_86501667_8650166marker_locus56.01 cM
Citrus-P.trifoliata-consensus-2018.LG077_92442787_9244278marker_locus58.59 cM
Citrus-P.trifoliata-consensus-2018.LG077_96187257_9618725marker_locus59.15 cM
Citrus-P.trifoliata-consensus-2018.LG077_95662527_9566252marker_locus59.54 cM
Citrus-P.trifoliata-consensus-2018.LG077_90201347_9020134marker_locus60.3 cM
Citrus-P.trifoliata-consensus-2018.LG077_110763457_11076345marker_locus62.83 cM
Citrus-P.trifoliata-consensus-2018.LG077_107583137_10758313marker_locus63.96 cM
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Map QTL
This map contains 14 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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