FC873020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873020 vs. ExPASy Swiss-Prot
Match: APMAP_BOVIN (Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.370e-12 Identity = 41/145 (28.28%), Postives = 80/145 (55.17%), Query Frame = 2 Query: 2 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 415 +V E R R++++ G KG + F ENLPG PDNI + G +W+++ + A + L+ +K V+ KLFS+ + + ++ +++ GT +R+L DP GQ++++V+ + HLY+ S + ++ +++L Sbjct: 271 LVVELAMVRIRRFYVSGLMKGGADVFVENLPGFPDNIRASSSGGYWVSMAAIRANPGFSMLDFLSERPFLKKVIF---KLFSQETVMKFVPRYSLVLELSDSGTFLRSLHDPEGQVVTYVSEAHEHSGHLYLGSFRAPYLCRLRL 412
BLAST of FC873020 vs. ExPASy Swiss-Prot
Match: APMAP_SALSA (Adipocyte plasma membrane-associated protein OS=Salmo salar GN=apmap PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.508e-12 Identity = 44/146 (30.14%), Postives = 77/146 (52.74%), Query Frame = 2 Query: 2 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQLS 418 +V E+ R R+ + G KG ++TF +NLPG PDNI + G +W+A+ + + L+ IK ++ KLFS+ + + + +I + E G +R+ DP G + ++V+ + D HLY+ S S ++ K+ LS Sbjct: 272 LVAETTMARIRRVHVSGLNKGGMDTFVDNLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQKPWIKKLIF---KLFSQDVLMKFVPRYSLVIELQESGACMRSFHDPHGMVAAYVSEAHEHDGHLYLGSFRSPYLCKLDLS 414
BLAST of FC873020 vs. ExPASy Swiss-Prot
Match: APMAP_RAT (Adipocyte plasma membrane-associated protein OS=Rattus norvegicus GN=Apmap PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 9.806e-12 Identity = 44/145 (30.34%), Postives = 77/145 (53.10%), Query Frame = 2 Query: 2 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 415 +V E+ R R+ ++ G KG + F EN+PG PDNI + G +W+A + A + L+ IK ++ KLFS+ + + ++ V++ G R+L DP GQ++++V+ + D +LY+ S S FI ++ L Sbjct: 232 LVAETAMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIF---KLFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFRSPFICRLSL 373
BLAST of FC873020 vs. ExPASy Swiss-Prot
Match: APMAP_MOUSE (Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.281e-11 Identity = 43/145 (29.66%), Postives = 77/145 (53.10%), Query Frame = 2 Query: 2 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 415 +V E+ R R+ ++ G KG + F EN+PG PDNI + G +W+A + A + L+ IK ++ K+FS+ + + ++ V++ G R+L DP GQ++++V+ + D +LY+ S S FI ++ L Sbjct: 271 LVAETTMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIF---KMFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFRSPFICRLSL 412 The following BLAST results are available for this feature:
BLAST of FC873020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873020 ID=FC873020; Name=FC873020; organism=Citrus clementina; type=EST; length=534bpback to top |