FC873116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873116 vs. ExPASy Swiss-Prot
Match: TF2B_SOYBN (Transcription initiation factor IIB OS=Glycine max GN=TFIIB1 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 7.889e-38 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 2 Query: 2 KSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 232 KSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDIS+ATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP Sbjct: 237 KSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 313
BLAST of FC873116 vs. ExPASy Swiss-Prot
Match: TF2B2_ARATH (Transcription initiation factor IIB-2 OS=Arabidopsis thaliana GN=TFIIB2 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.066e-34 Identity = 72/77 (93.51%), Postives = 75/77 (97.40%), Query Frame = 2 Query: 2 KSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 232 KSEEFDIRRSPISIAAAVIYIITQLSD+KKPL+DISVATGVAEGTIRNSYKDLYPH+SKIIP WYAKEEDLKNL SP Sbjct: 236 KSEEFDIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWYAKEEDLKNLQSP 312
BLAST of FC873116 vs. ExPASy Swiss-Prot
Match: TF2B1_ARATH (Transcription initiation factor IIB-1 OS=Arabidopsis thaliana GN=TFIIB1 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.626e-33 Identity = 70/77 (90.91%), Postives = 72/77 (93.51%), Query Frame = 2 Query: 2 KSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 232 KSEEFDIRRSPISIAA VIYIITQLSDDKK LKDIS ATGVAEGTIRNSYKDLYPH+SKI P+WYAKEEDLKNL SP Sbjct: 236 KSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 312
BLAST of FC873116 vs. ExPASy Swiss-Prot
Match: TF2B_ORYSJ (Transcription initiation factor IIB OS=Oryza sativa subsp. japonica GN=TFIIB PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.641e-33 Identity = 67/77 (87.01%), Postives = 74/77 (96.10%), Query Frame = 2 Query: 2 KSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 232 +SEE DIRRSPISIAAAVIY+ITQLSDDKKPLKDIS+ATGVAEGTIRNSYKDLYP+ S++IPN YAKEEDLKNLC+P Sbjct: 236 RSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312 The following BLAST results are available for this feature:
BLAST of FC873116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873116 ID=FC873116; Name=FC873116; organism=Citrus clementina; type=EST; length=438bpback to top |