FC930008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930008 vs. ExPASy Swiss-Prot
Match: ODO2_MYCTU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Mycobacterium tuberculosis GN=sucB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16 Identity = 39/88 (44.32%), Postives = 63/88 (71.59%), Query Frame = 1 Query: 412 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISKSGEGVAHVAPS-EKIP 672 +P +GES+T+GT+ ++LK GD VELDEP+ ++ TDKV ++ SP AGV+ +++ +E +TVE G ++AVI + + AP+ EK+P Sbjct: 7 MPALGESVTEGTVTRWLKQEGDTVELDEPLVEVSTDKVDTEIPSPAAGVLTKIIAQEDDTVEVGGELAVIGDAKDAGEAAAPAPEKVP 94 HSP 2 Score: 74.7146 bits (182), Expect = 5.026e-13 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 388 GGDLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISKSGEGVAHVAPS---EKIPEKA 681 GGD ++P +GES+T+GT+ ++LK GD V++DEP+ ++ TDKV ++ SP AGV+ + E TV G ++A I + + A AP + +PE A Sbjct: 118 GGDAKPVLMPELGESVTEGTVIRWLKKIGDSVQVDEPLVEVSTDKVDTEIPSPVAGVLVSISADEDATVPVGGELARIGVAADIGAAPAPKPAPKPVPEPA 218
BLAST of FC930008 vs. ExPASy Swiss-Prot
Match: ODO2_MYCBO (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Mycobacterium bovis GN=sucB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16 Identity = 39/88 (44.32%), Postives = 63/88 (71.59%), Query Frame = 1 Query: 412 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISKSGEGVAHVAPS-EKIP 672 +P +GES+T+GT+ ++LK GD VELDEP+ ++ TDKV ++ SP AGV+ +++ +E +TVE G ++AVI + + AP+ EK+P Sbjct: 7 MPALGESVTEGTVTRWLKQEGDTVELDEPLVEVSTDKVDTEIPSPAAGVLTKIIAQEDDTVEVGGELAVIGDAKDAGEAAAPAPEKVP 94 HSP 2 Score: 74.7146 bits (182), Expect = 5.026e-13 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 388 GGDLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISKSGEGVAHVAPS---EKIPEKA 681 GGD ++P +GES+T+GT+ ++LK GD V++DEP+ ++ TDKV ++ SP AGV+ + E TV G ++A I + + A AP + +PE A Sbjct: 118 GGDAKPVLMPELGESVTEGTVIRWLKKIGDSVQVDEPLVEVSTDKVDTEIPSPVAGVLVSISADEDATVPVGGELARIGVAADIGAAPAPKPAPKPVPEPA 218
BLAST of FC930008 vs. ExPASy Swiss-Prot
Match: ODO2_STAS1 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=odhB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.410e-15 Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 412 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISK-SGEGVAHVAPSEKIPEK 678 VP + ESIT+GT+A++LK GD V+ E I ++ETDKV ++V S EAGV++EL+ EG+TVE G IAV+ + SG + ++ P++ Sbjct: 6 VPELAESITEGTIAEWLKQVGDSVDKGEAIVELETDKVNVEVVSEEAGVLQELLANEGDTVEVGQAIAVVGEGSGNNTSEAPAKQEAPKQ 95
BLAST of FC930008 vs. ExPASy Swiss-Prot
Match: ODO2_STAAB (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=odhB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15 Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 412 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISKSGEGVAHVAPSEKIPEK 678 VP + ESIT+GT+A++LK GD VE E I ++ETDKV ++V S EAGV+ E + EG+TVE G IAVI + + ++ P++ Sbjct: 6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAVIGEGSGNASKENSNDNTPQQ 94
BLAST of FC930008 vs. ExPASy Swiss-Prot
Match: ODO2_STAAW (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain MW2) GN=odhB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 412 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISKSGEGVAHVAPSEKIPEK 678 VP + ESIT+GT+A++LK GD VE E I ++ETDKV ++V S EAGV+ E + EG+TVE G IA+I + + ++ P++ Sbjct: 6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQ 94
BLAST of FC930008 vs. ExPASy Swiss-Prot
Match: ODO2_STAAS (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain MSSA476) GN=odhB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 412 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISKSGEGVAHVAPSEKIPEK 678 VP + ESIT+GT+A++LK GD VE E I ++ETDKV ++V S EAGV+ E + EG+TVE G IA+I + + ++ P++ Sbjct: 6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQ 94
BLAST of FC930008 vs. ExPASy Swiss-Prot
Match: ODO2_STAAR (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain MRSA252) GN=odhB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14 Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 412 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISKSGEGVAHVAPSEKIPEK 678 VP + ESIT+GT+A++LK GD VE E I ++ETDKV ++V S EAGV+ E + EG+TVE G IAVI + + ++ P++ Sbjct: 6 VPELAESITEGTIAEWLKNLGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAVIGEGSGNASKENSNDNTPQQ 94
BLAST of FC930008 vs. ExPASy Swiss-Prot
Match: ODO2_STAAN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain N315) GN=odhB PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 412 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISKSGEGVAHVAPSEKIPEK 678 VP + ESIT+GT+A++LK GD VE E I ++ETDKV ++V S EAGV+ E + EG+TVE G IA+I + + ++ P++ Sbjct: 6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQ 94
BLAST of FC930008 vs. ExPASy Swiss-Prot
Match: ODO2_STAAM (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=odhB PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 412 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISKSGEGVAHVAPSEKIPEK 678 VP + ESIT+GT+A++LK GD VE E I ++ETDKV ++V S EAGV+ E + EG+TVE G IA+I + + ++ P++ Sbjct: 6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQ 94
BLAST of FC930008 vs. ExPASy Swiss-Prot
Match: ODO2_STAAC (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain COL) GN=odhB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 412 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVVKEGETVEPGTKIAVISKSGEGVAHVAPSEKIPEK 678 VP + ESIT+GT+A++LK GD VE E I ++ETDKV ++V S EAGV+ E + EG+TVE G IA+I + + ++ P++ Sbjct: 6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQ 94 The following BLAST results are available for this feature:
BLAST of FC930008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930008 ID=FC930008; Name=FC930008; organism=Citrus clementina; type=EST; length=681bpback to top |