CF417520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417520 vs. ExPASy Swiss-Prot
Match: SC61G_ORYSJ (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica GN=Os02g0178400 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.872e-18 Identity = 45/60 (75.00%), Postives = 47/60 (78.33%), Query Frame = 3 Query: 3 PLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGSG 182 PLR+FAKDS+RLVKRCHKPDRKEFTKVA RTAI KLIFIPINNIIVGSG Sbjct: 10 PLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIPINNIIVGSG 69
BLAST of CF417520 vs. ExPASy Swiss-Prot
Match: S61G1_ARATH (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana GN=SEC61G1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.976e-17 Identity = 44/59 (74.58%), Postives = 46/59 (77.97%), Query Frame = 3 Query: 3 PLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 179 PLRDFAKDS+RLVKRCHKPDRKEFTKVA RTAI KLIFIPINNIIVG+ Sbjct: 10 PLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGA 68
BLAST of CF417520 vs. ExPASy Swiss-Prot
Match: S61G3_ARATH (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana GN=SEC61G3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.185e-16 Identity = 42/59 (71.19%), Postives = 45/59 (76.27%), Query Frame = 3 Query: 3 PLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 179 PLRDFAK S+RLV+RCHKPDRKEFTKVA RTAI KL+FIPINNIIVGS Sbjct: 10 PLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIPINNIIVGS 68
BLAST of CF417520 vs. ExPASy Swiss-Prot
Match: SC61G_BRABE (Protein transport protein Sec61 subunit gamma OS=Branchiostoma belcheri GN=SEC61G PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13 Identity = 38/59 (64.41%), Postives = 39/59 (66.10%), Query Frame = 3 Query: 3 PLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 179 P R FAKDS RLVKRC KPDRKEF K+A TAI KLI IPINNIIVGS Sbjct: 10 PARQFAKDSYRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVGS 68
BLAST of CF417520 vs. ExPASy Swiss-Prot
Match: S61G1_GRYOR (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis GN=SEC61G PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12 Identity = 38/59 (64.41%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 3 PLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 179 P R FAKDS+RLVKRC KPDRKEF K+A TAI KLI IPINNIIVGS Sbjct: 10 PGRQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFCIMGFIGFFVKLIHIPINNIIVGS 68
BLAST of CF417520 vs. ExPASy Swiss-Prot
Match: SC61G_XENLA (Protein transport protein Sec61 subunit gamma OS=Xenopus laevis GN=sec61g PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.466e-12 Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 3 Query: 3 PLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 179 P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IPINNIIVGS Sbjct: 10 PSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVGS 68
BLAST of CF417520 vs. ExPASy Swiss-Prot
Match: S61G2_DROME (Protein transport protein Sec61 gamma-2 subunit OS=Drosophila melanogaster GN=Sec61gamma PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.914e-12 Identity = 37/59 (62.71%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 3 PLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 179 P R FAKDS+RLVKRC KPDRKEF K+A TA+ KLI IPINNIIVGS Sbjct: 10 PGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFCIMGFIGFFVKLIHIPINNIIVGS 68
BLAST of CF417520 vs. ExPASy Swiss-Prot
Match: S61G1_DROME (Protein transport protein Sec61 gamma-1 subunit OS=Drosophila melanogaster GN=SEC61G1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.914e-12 Identity = 37/59 (62.71%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 3 PLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 179 P R FAKDS+RLVKRC KPDRKEF K+A TA+ KLI IPINNIIVGS Sbjct: 10 PGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFAIMGFIGFFVKLIHIPINNIIVGS 68
BLAST of CF417520 vs. ExPASy Swiss-Prot
Match: SC61G_CIOIN (Protein transport protein Sec61 subunit gamma OS=Ciona intestinalis GN=SEC61G PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12 Identity = 37/59 (62.71%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 3 PLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 179 P + FAKDS+RLVKRC KPDRKEF K+A TAI KLI IPINNIIVGS Sbjct: 10 PGKQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFAIMGFIGFFVKLIHIPINNIIVGS 68
BLAST of CF417520 vs. ExPASy Swiss-Prot
Match: SC61G_HARAN (Protein transport protein Sec61 subunit gamma OS=Harpagifer antarcticus GN=sec61g PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.265e-12 Identity = 37/58 (63.79%), Postives = 38/58 (65.52%), Query Frame = 3 Query: 3 PLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVG 176 P R F KDS+RLVKRC KPDRKEF KVA TAI KLI IPINNIIVG Sbjct: 10 PSRQFVKDSIRLVKRCTKPDRKEFQKVAMATAIGFAIMGFIGFFVKLIHIPINNIIVG 67 The following BLAST results are available for this feature:
BLAST of CF417520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417520 ID=CF417520; Name=CF417520; organism=Citrus sinensis; type=EST; length=431bpback to top |