CF504413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504413 vs. ExPASy Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.072e-25 Identity = 51/81 (62.96%), Postives = 67/81 (82.72%), Query Frame = 1 Query: 1 RGWVFPNNGRQLRIGVPNRVSYRDFVFKVNGTD-IVHGYCIDVFLAAVRLLPYAVPYKFIPYGDGHKNPTYSELINQITTG 240 RGWVF NNG++L+IGVP RVSY++FV ++ GT+ + G+CIDVF AAV LLPYAVP KFIPYG+G +NP+Y+ ++ ITTG Sbjct: 455 RGWVFSNNGKELKIGVPLRVSYKEFVSQIRGTENMFKGFCIDVFTAAVNLLPYAVPVKFIPYGNGKENPSYTHMVEMITTG 535
BLAST of CF504413 vs. ExPASy Swiss-Prot
Match: GLR31_ARATH (Glutamate receptor 3.1 OS=Arabidopsis thaliana GN=GLR3.1 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.072e-25 Identity = 53/82 (64.63%), Postives = 69/82 (84.15%), Query Frame = 1 Query: 1 RGWVFPNNGRQLRIGVPNRVSYRDFVFKVNGT-DIVHGYCIDVFLAAVRLLPYAVPYKFIPYGDGHKNPTYSELINQITTGV 243 RGW+F NNGR+LRIGVP+R S++DFV +VNG+ + V GYCIDVF AAV+LL Y VP++FI +GDG NP Y+EL+N++TTGV Sbjct: 455 RGWIFRNNGRRLRIGVPDRASFKDFVSRVNGSSNKVQGYCIDVFEAAVKLLSYPVPHEFIFFGDGLTNPNYNELVNKVTTGV 536
BLAST of CF504413 vs. ExPASy Swiss-Prot
Match: GLR32_ARATH (Glutamate receptor 3.2 OS=Arabidopsis thaliana GN=GLR3.2 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.074e-25 Identity = 49/94 (52.13%), Postives = 73/94 (77.66%), Query Frame = 1 Query: 1 RGWVFPNNGRQLRIGVPNRVSYRDFVFKVNGTDIVHGYCIDVFLAAVRLLPYAVPYKFIPYGDGHKNPTYSELINQITTGVSRILTKKVAQLTR 282 RGWVFPNNGR+LRIGVP+R S+++FV +++G++ V GY IDVF AAV+L+ Y VP++F+ +GDG KNP ++E +N +T GV + +A +T+ Sbjct: 457 RGWVFPNNGRRLRIGVPDRASFKEFVSRLDGSNKVQGYAIDVFEAAVKLISYPVPHEFVLFGDGLKNPNFNEFVNNVTIGVFDAVVGDIAIVTK 550
BLAST of CF504413 vs. ExPASy Swiss-Prot
Match: GLR31_ORYSJ (Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.949e-25 Identity = 49/79 (62.03%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 1 RGWVFPNNGRQLRIGVPNRVSYRDFVFKVNGTDIVHGYCIDVFLAAVRLLPYAVPYKFIPYGDGHKNPTYSELINQITT 237 RGWVFPNNG +++IGVP+RVSYR FV + T +V G CIDVF+AA+ LL Y VPY+F+P+G+ +NP+YSELIN+I T Sbjct: 458 RGWVFPNNGNEIKIGVPDRVSYRQFVSVDSETGMVRGLCIDVFVAAINLLAYPVPYRFVPFGNNRENPSYSELINKIIT 536
BLAST of CF504413 vs. ExPASy Swiss-Prot
Match: GLR34_ARATH (Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 5.882e-24 Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 1 RGWVFPNNGRQLRIGVPNRVSYRDFVFKVNGTDIVHGYCIDVFLAAVRLLPYAVPYKFIPYGDGHKNPTYSELINQI 231 RGWVFPNNG+ LRIGVPNRVSY D+V K V GYCIDVF AA+ LLPY VP +I YGDG +NP+Y L+N++ Sbjct: 483 RGWVFPNNGKPLRIGVPNRVSYTDYVSKDKNPPGVRGYCIDVFEAAIELLPYPVPRTYILYGDGKRNPSYDNLVNEV 559
BLAST of CF504413 vs. ExPASy Swiss-Prot
Match: GLR36_ARATH (Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.449e-22 Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 1 Query: 1 RGWVFPNNGRQLRIGVPNRVSYRDFVFKVNGTDIVHGYCIDVFLAAVRLLPYAVPYKFIPYGDGHKNPTYSELINQITTGV 243 RGWVF NNGR LRIGVPNR + + V V ++ G+C+DVF+AA+ LLPYAVP++ + +G+GH NP+ SEL+ ITTGV Sbjct: 447 RGWVFSNNGRHLRIGVPNRYRFEEVV-SVKSNGMITGFCVDVFIAAINLLPYAVPFELVAFGNGHDNPSNSELVRLITTGV 526
BLAST of CF504413 vs. ExPASy Swiss-Prot
Match: GLR35_ARATH (Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 7.191e-22 Identity = 46/93 (49.46%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 1 RGWVFPNNGRQLRIGVPNRVSYRDFVFKVNGTDIVHGYCIDVFLAAVRLLPYAVPYKFIPYGDGHKNPTYSELINQITTGVSRILTKKVAQLT 279 RGWVFP NG+ L+IGVPNRVSY+++ K V G+CID+F AA++LLPY VP +I YGDG KNP+Y LI+++ + + V +T Sbjct: 476 RGWVFPENGKPLKIGVPNRVSYKNYASKDKNPLGVKGFCIDIFEAAIQLLPYPVPRTYILYGDGKKNPSYDNLISEVAANIFDVAVGDVTIIT 568
BLAST of CF504413 vs. ExPASy Swiss-Prot
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 9.096e-17 Identity = 38/82 (46.34%), Postives = 57/82 (69.51%), Query Frame = 1 Query: 1 RGWVFPNNGRQLRIGVPNRVSYRDFVFKV-NGTDIVHGYCIDVFLAAVRLLPYAVPYKFIPYGDGHKNPTYSELINQITTGV 243 RGWV ++ L+I VP RVS+ +FV + N + + G+CIDVF+ A++ +PY+VPY F P+G+GH +P Y+ LI +T GV Sbjct: 448 RGWVIADSADPLKIVVPRRVSFVEFVTEEKNSSHRIQGFCIDVFIEALKFVPYSVPYIFEPFGNGHSSPNYNHLIQMVTDGV 529
BLAST of CF504413 vs. ExPASy Swiss-Prot
Match: GLR23_ARATH (Glutamate receptor 2.3 OS=Arabidopsis thaliana GN=GLR2.3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.969e-13 Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 1 Query: 1 RGWVFPNNGRQLRIGVPNRVSYRDFVF----KVNGTDIVHGYCIDVFLAAVRLLPYAVPYKFIPY--GDGHKNPTYSELINQITTG 240 +GW P G++LRIGVP R Y D V + + +V G+CID F A +R LPY V Y+FIP+ DG Y++L+ Q+ G Sbjct: 443 KGWQIPTKGKKLRIGVPKRTGYTDLVKVTRDPITNSTVVTGFCIDFFEAVIRELPYDVSYEFIPFEKPDGKTAGNYNDLVYQVYLG 528
BLAST of CF504413 vs. ExPASy Swiss-Prot
Match: GLR26_ARATH (Glutamate receptor 2.6 OS=Arabidopsis thaliana GN=GLR2.6 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.165e-12 Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 1 Query: 1 RGWVFPNNGRQLRIGVPNRVSYRDFVFKVNGTDI----VHGYCIDVFLAAVRLLPYAVPYKFIPY--GDGHKNPTYSELINQITTG 240 +GW FP N ++LRI VP + + +FV + + G+CIDVF A+R +PYAVPY++IP+ DG +Y E++ + G Sbjct: 451 KGWEFPTNAKKLRIAVPKKDGFNNFVEVTKDANTNAPTITGFCIDVFDTAMRQMPYAVPYEYIPFETPDGKPRGSYDEMVYHVFLG 536 The following BLAST results are available for this feature:
BLAST of CF504413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504413 ID=CF504413; Name=CF504413; organism=Citrus sinensis; type=EST; length=338bpback to top |