CK935628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935628 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.522e-28 Identity = 61/88 (69.32%), Postives = 72/88 (81.82%), Query Frame = 2 Query: 131 SAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVN 394 SAFFVFME+FRK +KE HPNNKSVA VGKA G+KWK ++ EKAPF+ +AEKRK +Y KN+Q YNK+ A G AAEE ESDKS+SEVN Sbjct: 41 SAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG--AAEEEESDKSRSEVN 126
BLAST of CK935628 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.861e-26 Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 2 Query: 131 SAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVN 394 SAFFVFMEEFRK F + HP NK+V+ VGKAAG KWK+MS+ EKAP+V ++EKRK +Y KNM+ YNK+ A+G +E ES+KS SEVN Sbjct: 49 SAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGPTGGDEEESEKSVSEVN 136
BLAST of CK935628 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.970e-24 Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = 2 Query: 131 SAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVN 394 SAFFVFM +FR+Q+K+ HPNNKSVA VGKA GE+WKS+SE+EKAP+V+RA K+K +Y +Q YNK+L +E SDKSKSEVN Sbjct: 50 SAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKKLE---GKDDEEGSDKSKSEVN 134
BLAST of CK935628 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.617e-24 Identity = 57/96 (59.38%), Postives = 69/96 (71.88%), Query Frame = 2 Query: 131 SAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAA--------EENESDKSKSEVN 394 SAFFVFMEEFRK+FKE +P NKSVA VGKAAG++WKS+SE +KAP+V +A K K +YNK + YNK + A +E ESDKSKSEVN Sbjct: 46 SAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAKKAPAKEEEEEDEEESDKSKSEVN 141
BLAST of CK935628 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.289e-23 Identity = 56/99 (56.57%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 131 SAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYN-----------KQLADGVNAAEENESDKSKSEVN 394 SAFFVFM EFR++FK+ +P NKSVA VGKAAGE+WKS+SE EKAP+V +A K K +YNK + YN K A V +E ESDKSKSE+N Sbjct: 47 SAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGESAAAAAPKKAAAKEVEEEDEEESDKSKSEIN 145 The following BLAST results are available for this feature:
BLAST of CK935628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935628 ID=CK935628; Name=CK935628; organism=Citrus sinensis; type=EST; length=819bpback to top |