DN135169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135169 vs. ExPASy Swiss-Prot
Match: SYP71_ARATH (Syntaxin-71 OS=Arabidopsis thaliana GN=SYP71 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.809e-28 Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 2 Query: 101 MSVIDLITRVDAICXXXXXXXXXXXXELNVYGDDAFARLYGVVQADLDAALQKSEAAATEKNRATAVAMNAEIRRTKARLLEEVAKLQRLAFKKVKGLSKEELGSK 418 M+VID++TRVD+IC E N+ GDDAFARLYG + ++ AL+K+E EKNRA AVAMNAEIRRTKARL EEV KLQRLA K+VKGL+ EEL ++ Sbjct: 1 MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKEKNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAAR 106 HSP 2 Score: 79.7221 bits (195), Expect = 1.445e-14 Identity = 50/98 (51.02%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 369 LLLKR*KGFQKRNLA-RSDLVAALKDRIEGIPDXXXXXXXXXXXXXXXXXXXX--IKFDTYSGGKFDDEYFQETEESSGFRQEYEMRRMKQDQGLDVI 653 L +KR KG LA R+DLV AL RIE IPD IKFD S G+FDD+YFQE+ ESS FRQEYEMR++KQ+QGLD+I Sbjct: 90 LAVKRVKGLTTEELAARNDLVLALPARIEAIPDGTAGGPKSTSAWTPSSTTSRPDIKFD--SDGRFDDDYFQESNESSQFRQEYEMRKIKQEQGLDMI 185
BLAST of DN135169 vs. ExPASy Swiss-Prot
Match: SYP73_ARATH (Syntaxin-73 OS=Arabidopsis thaliana GN=SYP73 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.458e-27 Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 2 Query: 101 MSVIDLITRVDAICXXXXXXXXXXXXELNVYGDDAFARLYGVVQADLDAALQKSEAAATEKNRATAVAMNAEIRRTKARLLEEVAKLQRLAFKKVKGLSKEELGSK 418 M VIDLITRVD+IC + NV GDDAF+RLY V+ L+ LQK+E ++E N+A AVAMNAEIRRTKARLLE + KLQRL+ KKVKGLSKEEL ++ Sbjct: 1 MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSETNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDAR 106
BLAST of DN135169 vs. ExPASy Swiss-Prot
Match: SYP72_ARATH (Syntaxin-72 OS=Arabidopsis thaliana GN=SYP72 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.077e-25 Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 2 Query: 101 MSVIDLITRVDAICXXXXXXXXXXXXELNVYGDDAFARLYGVVQADLDAALQKSEAAATEKNRATAVAMNAEIRRTKARLLEEVAKLQRLAFKKVKGLSKEELGSK 418 M VID+I RVD IC E+ GDDAF+RL+ + +D++A L+K+E A+TEKNRA AVAMNAE+RRTKARL E+V KLQ+LA KK+KGL++EE S+ Sbjct: 1 MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTEKNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESR 106 HSP 2 Score: 68.9366 bits (167), Expect = 2.551e-11 Identity = 44/98 (44.90%), Postives = 55/98 (56.12%), Query Frame = 3 Query: 369 LLLKR*KGFQKRNL-ARSDLVAALKDRIEGIPDXXXXXXXXXXXXXXXXXXXX--IKFDTYSGGKFDDEYFQETEESSGFRQEYEMRRMKQDQGLDVI 653 L +K+ KG + +R DLV AL DR++ IPD IKFD S DD +FQ++EESS FRQEYEMRR KQD+GLD+I Sbjct: 90 LAVKKIKGLTREERESRCDLVIALADRLQAIPDGNEHGAKQANSDWGGASAPNKNIKFDM-SEEDMDDGFFQQSEESSQFRQEYEMRRKKQDEGLDII 186 The following BLAST results are available for this feature:
BLAST of DN135169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN135169 ID=DN135169; Name=DN135169; organism=Citrus sinensis; type=EST; length=655bpback to top |