DN135111
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_GOSHI (40S ribosomal protein S16 OS=Gossypium hirsutum GN=RPS16 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.668e-34 Identity = 70/77 (90.91%), Postives = 72/77 (93.51%), Query Frame = 1 Query: 97 VESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 +ESVQCFGRKKTAVAVT+CKRGRGLIKINGCPIELVEPEILRFKA EPILLLGR RF GVDMRIRV GGHTSQIYA Sbjct: 6 IESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAVEPILLLGRQRFTGVDMRIRVKGGGHTSQIYA 82
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS161_ARATH (40S ribosomal protein S16-1 OS=Arabidopsis thaliana GN=RPS16A PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.009e-33 Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1 Query: 73 MATAKAXPVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 MAT A ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRFAGV+MRIRV GGHTSQ+YA Sbjct: 1 MATQPA--TESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVNMRIRVNGGGHTSQVYA 83
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS163_ARATH (40S ribosomal protein S16-3 OS=Arabidopsis thaliana GN=RPS16C PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.154e-33 Identity = 67/85 (78.82%), Postives = 75/85 (88.24%), Query Frame = 1 Query: 73 MATAKAXPVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 MAT A ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRFAGV+MRIRV GGHTSQ+YA Sbjct: 1 MATQPA--TESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVNMRIRVNGGGHTSQVYA 83
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_FRIAG (40S ribosomal protein S16 OS=Fritillaria agrestis GN=RPS16 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.039e-32 Identity = 66/76 (86.84%), Postives = 71/76 (93.42%), Query Frame = 1 Query: 100 ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 ESVQCFGRKKTAVAVT+CKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGRHRF GVDMRIRV GG TSQIYA Sbjct: 7 ESVQCFGRKKTAVAVTHCKRGRGLIKVNGSPIELVKPEILRYKAFEPILLLGRHRFVGVDMRIRVRGGGKTSQIYA 82
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS162_ARATH (40S ribosomal protein S16-2 OS=Arabidopsis thaliana GN=RPS16B PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.256e-30 Identity = 63/85 (74.12%), Postives = 72/85 (84.71%), Query Frame = 1 Query: 73 MATAKAXPVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 MAT A ESVQCFGRKKTA AVTYCKRG G+IK+NG PIEL +PEILRFK +EP+LLLG+HRFAGVDMRIR GG+TS++YA Sbjct: 1 MATQPAK--ESVQCFGRKKTATAVTYCKRGSGMIKLNGSPIELYQPEILRFKIFEPVLLLGKHRFAGVDMRIRATGGGNTSRVYA 83
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_TORRU (40S ribosomal protein S16 OS=Tortula ruralis GN=RPS16 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.616e-29 Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 1 Query: 97 VESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 VESVQCFGRKKTAVAVTYC+RGRGLI++ PIELVEPEILR+KA+EP+LLLGR +FAGVDMRIRV GG+TSQIYA Sbjct: 4 VESVQCFGRKKTAVAVTYCRRGRGLIRLT-VPIELVEPEILRYKAFEPVLLLGRSKFAGVDMRIRVKGGGNTSQIYA 79
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_ORYSJ (40S ribosomal protein S16 OS=Oryza sativa subsp. japonica GN=RPS16A PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.512e-27 Identity = 58/78 (74.36%), Postives = 65/78 (83.33%), Query Frame = 1 Query: 94 PVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 P +VQCFGRKKTAVAV+YCK GRGLIK+NG PIEL+ PE+LR KA+EPILL GR RF +DMRIRV GG TSQIYA Sbjct: 9 PPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYA 86
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_ORYSI (40S ribosomal protein S16 OS=Oryza sativa subsp. indica GN=RPS16A PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.512e-27 Identity = 58/78 (74.36%), Postives = 65/78 (83.33%), Query Frame = 1 Query: 94 PVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 P +VQCFGRKKTAVAV+YCK GRGLIK+NG PIEL+ PE+LR KA+EPILL GR RF +DMRIRV GG TSQIYA Sbjct: 9 PPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYA 86
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_AEDAE (40S ribosomal protein S16 OS=Aedes aegypti GN=RpS16 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.725e-26 Identity = 51/85 (60.00%), Postives = 69/85 (81.18%), Query Frame = 1 Query: 73 MATAKAXPVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 M A+ PV +VQ FGRKKTA AV YCKRG+GL+++NG P++ +EP++L++K EP+LLLG+ +FAGVD+RIRV GGH +QIYA Sbjct: 1 MVKARKEPVNAVQVFGRKKTATAVAYCKRGKGLLRVNGRPLDQIEPKVLQYKLQEPLLLLGKEKFAGVDIRIRVSGGGHVAQIYA 85
BLAST of DN135111 vs. ExPASy Swiss-Prot
Match: RS16_DROME (40S ribosomal protein S16 OS=Drosophila melanogaster GN=RpS16 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.865e-26 Identity = 51/85 (60.00%), Postives = 68/85 (80.00%), Query Frame = 1 Query: 73 MATAKAXPVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVXXGGHTSQIYA 327 M + PV++VQ FGRKKTA AV YCKRG GL+K+NG P+E +EP++L++K EP+LLLG+ +FAGVD+R+RV GGH +QIYA Sbjct: 1 MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVRVSGGGHVAQIYA 85 The following BLAST results are available for this feature:
BLAST of DN135111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135111 ID=DN135111; Name=DN135111; organism=Citrus sinensis; type=EST; length=329bpback to top |