DN135109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_ARATH (40S ribosomal protein S29 OS=Arabidopsis thaliana GN=RPS29A PE=3 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 9.337e-26 Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 MGHSNVWNSHP+ YGPGSR CRVCGN H +IRKYGL CCRQCFRSNAKEIGF+KYR Sbjct: 1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_WHEAT (40S ribosomal protein S29 OS=Triticum aestivum GN=RPS29 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 6.052e-25 Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 MGHSNVWNSHP+ YG GSR CRVCGN H +IRKYGLMCCRQCFRS+AK+IGF+KYR Sbjct: 1 MGHSNVWNSHPKNYGAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIKYR 56
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_GRIJA (40S ribosomal protein S29 OS=Griffithsia japonica GN=RPS29 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.306e-19 Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 MGH N+W SHPR YG GSR+C++CGN H +IRKY + CRQCFR AK+IGF+KYR Sbjct: 1 MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_IXOSC (40S ribosomal protein S29 OS=Ixodes scapularis GN=RpS29 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.222e-17 Identity = 37/54 (68.52%), Postives = 41/54 (75.93%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH N+W SHPR YGPGSR CRVC N H +IRKYGL CR+CFR A +IGF K Sbjct: 1 MGHENIWYSHPRKYGPGSRYCRVCANHHGLIRKYGLNICRRCFRQYAADIGFKK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_GUITH (40S ribosomal protein S29A OS=Guillardia theta GN=rps29A PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.596e-17 Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 M H N+WN H RTYG GSR CR+CGN +IRKYGL CRQCFR ++ +GF KYR Sbjct: 1 MSHKNIWNKHSRTYGKGSRGCRICGNRSGLIRKYGLSICRQCFREKSQNLGFDKYR 56
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_PLUXY (40S ribosomal protein S29 OS=Plutella xylostella GN=RpS29 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.723e-17 Identity = 36/54 (66.67%), Postives = 41/54 (75.93%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH+N+W SHPR YG GSR+CR C N H +IRKYGL CRQCFR A +IGF K Sbjct: 1 MGHANIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_SPOFR (40S ribosomal protein S29 OS=Spodoptera frugiperda GN=RpS29 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.556e-17 Identity = 36/54 (66.67%), Postives = 41/54 (75.93%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH+N+W SHPR YG GSR+CR C N H +IRKYGL CRQCFR A +IGF K Sbjct: 1 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_SCALT (40S ribosomal protein S29 OS=Scarabaeus laticollis GN=RpS29 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.556e-17 Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH N+W SHPR YG GSR+CR C N H +IRKYGL CRQCFR A +IGF K Sbjct: 1 MGHQNIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_BOMMO (40S ribosomal protein S29 OS=Bombyx mori GN=RpS29 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.066e-17 Identity = 36/54 (66.67%), Postives = 41/54 (75.93%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 250 MGH+N+W SHPR YG GSR+CR C N H +IRKYGL CRQCFR A +IGF K Sbjct: 1 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
BLAST of DN135109 vs. ExPASy Swiss-Prot
Match: RS29_ASHGO (40S ribosomal protein S29 OS=Ashbya gossypii GN=RPS29 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.035e-16 Identity = 37/56 (66.07%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 89 MGHSNVWNSHPRTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 256 M H NVW SHPR YG GSR CRVC + +IRKYGL CRQCFR A +IGF KYR Sbjct: 1 MAHENVWFSHPRNYGKGSRQCRVCASHSGLIRKYGLNICRQCFREKANDIGFHKYR 56 The following BLAST results are available for this feature:
BLAST of DN135109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135109 ID=DN135109; Name=DN135109; organism=Citrus sinensis; type=EST; length=486bpback to top |