CN189431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MLH1_HUMAN (DNA mismatch repair protein Mlh1 OS=Homo sapiens GN=MLH1 PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.903e-58 Identity = 106/229 (46.29%), Postives = 160/229 (69.87%), Query Frame = 2 Query: 2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688 + +EDL SI + GFRGEALAS+++V HVT+TT T YR SY DG ++ PK CA +GTQI VE+LFYN+ RRK L+N S++Y KI++++ R ++H+ +SFS +K G ADV ++ +S +D+IR+++G +V+ L+++ + + FKM+GY+SN+NY KK +LF+N RLVE L++A+E VYAA PK + PF+Y+S+ + P++VDVNV PT Sbjct: 86 QSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGC----EDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPT 310
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MLH1_MOUSE (DNA mismatch repair protein Mlh1 OS=Mus musculus GN=Mlh1 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.983e-57 Identity = 106/227 (46.70%), Postives = 161/227 (70.93%), Query Frame = 2 Query: 8 YEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688 +EDL SI + GFRGEALAS+++V HVT+TT T YR SY DG ++ PK CA +GT I VE+LFYN+I RRK L+N S++Y KI++++ R +IH++ +SFS +K G +DV ++ ++ +D+IR+++G +V+ L+++ + + FKM+GY+SN+NY KK +LF+N RLVE A L++A+E VYAA PK + PF+Y+S+ + P++VDVNV PT Sbjct: 88 FEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGC----EDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPT 310
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MLH1_RAT (DNA mismatch repair protein Mlh1 OS=Rattus norvegicus GN=Mlh1 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.740e-56 Identity = 104/227 (45.81%), Postives = 159/227 (70.04%), Query Frame = 2 Query: 8 YEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688 +EDL I + GFRGEALAS+++V HVT+TT T YR SY DG ++ PK CA +GT I VE+LFYN+I R+K L+N S++Y KI++++ R +IH++ +SFS +K G +DV ++ ++ +D+IR+++G +V+ L+++ + + FKM+GY+SN+NY KK +LF+N RLVE A LK+A+E VYAA PK + PF+Y+ + + P++VDVNV PT Sbjct: 88 FEDLAMISTYGFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRKKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGC----EDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESAALKKAIEAVYAAYLPKNTHPFLYLILEISPQNVDVNVHPT 310
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MLH1_YEAST (DNA mismatch repair protein MLH1 OS=Saccharomyces cerevisiae GN=MLH1 PE=1 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 2.871e-48 Identity = 101/230 (43.91%), Postives = 152/230 (66.09%), Query Frame = 2 Query: 2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKT-TMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688 +K+EDL I++ GFRGEALAS+++V VTVTT K +RVSY +G M PK A GT I+VE+LF+N+ +R + L++ +D+Y+KI+D++ R AIH ++ FSC+K G + + + + D IRTV+ SVASNL+ S+ D + + +DG V N N+++KK+ + + F+N+RLV C L+RA+ VY+ PK ++PFIY+ IV+ P VDVNV PT Sbjct: 83 QKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIHSKDIGFSCKKFGDSNYSLSVKPSYTVQDRIRTVFNKSVASNLITFHISKVEDLN--LESVDGKVCNLNFISKKSISPIFFINNRLVTCDLLRRALNSVYSNYLPKGNRPFIYLGIVIDPAAVDVNVHPT 310
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MLH1_SCHPO (Putative MutL protein homolog 1 OS=Schizosaccharomyces pombe GN=mlh1 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.089e-43 Identity = 91/234 (38.89%), Postives = 143/234 (61.11%), Query Frame = 2 Query: 8 YEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGV-------MENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688 + DLQ +++ GFRGEALAS+++V VTV T +H ++ Y DG M P+ CA +GT I E+LFYN+ +R+ L+N S+++ +I+ L+ + AIH+ VSF+C+K G A + + S+ D IR +YG VAS+L E SS F +G++SN+++ KK+ ++LF+N+RLVE L+ A+E YA K + F+Y+S+ + PE +DVNV P+ Sbjct: 89 FNDLQHLQTFGFRGEALASISHVAKVTVVTKLSSDIHAWKAFYVDGALAPISPGMSPAPQPCAGKQGTVITAEDLFYNVRSRKSALKNGSEEFRRIMILVQKYAIHNDQVSFNCKKVGDTVASLSLSSRLSKADKIRHIYGPRVASHLRDFSLGE-GQSSIVGFSANGFISNADFQDKKSNLILFINNRLVESVELRHALEETYAKYLHKGASYFVYLSLNMSPEQLDVNVHPS 321
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MLH1_DICDI (DNA mismatch repair protein Mlh1 OS=Dictyostelium discoideum GN=mlh1 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.877e-40 Identity = 92/257 (35.80%), Postives = 150/257 (58.37%), Query Frame = 2 Query: 5 KYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVM--------ENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRL--DSIRTVYGVSVASNLV-----------------QLEASEYNDSS--SFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688 K+EDL+SI+S GFRGEAL+S+++V H+ + T T YR Y +G + ++PK CA V GTQI VE+LF+N +R+ L+N+ D++++IV L+ + AI++ VSF +K G +VH+ + L D I ++YG ++ L + S+ +S+ F M G+ S++NY +KK +LF+N RLV+ LK +E VY+ PK + PF+++ ++VPP+++DVN+ PT Sbjct: 142 KFEDLRSIQSFGFRGEALSSISHVSHLKILTKTADSPCAYRACYLNGKLTPPSPNEQSSDPKPCAGVNGTQITVEDLFFNTPSRKNVLKNTVDEHSRIVLLMKKYAINNPTVSFILKKQGDPTPEVHTSGGQNSLEKDVIGSLYGTDLSKELKIITIDPNNPNPNNDDDDNISGSQIKNSNLNRLDFTMKGFFSSTNYNSKKINFILFINGRLVDSKNLKTGLEQVYSKYLPKGTHPFMFIRLLVPPKNIDVNIHPT 398
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_HALOH (DNA mismatch repair protein mutL OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=mutL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.223e-27 Identity = 77/227 (33.92%), Postives = 127/227 (55.95%), Query Frame = 2 Query: 14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDG-VMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVA-KKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688 DL S+KS+GFRGEALAS+ V + + + TK ++ + G V+ EP C A GT I+V++LF+N AR K L+ + +++ I ++++R A+ + V+F+ +G R + + T LD I +YG +A +LV++ +Y D K+ GY+S +Y ++ + FVN R V + L R VE Y P + P +++++ + P VDVNV PT Sbjct: 86 DLYSLKSLGFRGEALASIASVSILDIISRTKSQTKAIKMRLKGGKVISKEP--CGASVGTDIIVKDLFFNTPARYKYLKTTRNEFKHISNIITREALAYPGVNFTLIHNG--RIVLKTPGTGKTLDCIYAIYGKEMAQSLVKI---DYEDR---YIKVSGYISRPDYYRYNRSYEIFFVNKRAVHNSILNRGVEEAYQGLLPPGAYPVVFLNLKLNPILVDVNVHPT 302
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_CLOBB (DNA mismatch repair protein mutL OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=mutL PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.088e-26 Identity = 72/230 (31.30%), Postives = 124/230 (53.91%), Query Frame = 2 Query: 2 RKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688 ++ ED+ SI ++GFRGEAL S+ V V + T + GY ++ G +E C KGT + V +LF+N+ AR+K L+ +S + + I D+++R+A+ + N+SF +G + +H+ + D IRT+YG S+ N++ Y + +S + + GYV + +FVN R ++ L AVE + + + PF + I + PE++DVN+ PT Sbjct: 82 KESEDIYSINTLGFRGEALPSIASVARVNLKTKQETEECGYEITIEGGKF-SEVTECGVNKGTIMEVRDLFFNVPARKKFLKTTSKESSLINDIITRIALSNPNISFKLFNNG--KKIIHTYGNGNMKDVIRTIYGKSIVENVL------YFEDTSDIATIYGYVGKEAIARGSRNNQSIFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIHPT 302
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_CLOAB (DNA mismatch repair protein mutL OS=Clostridium acetobutylicum GN=mutL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 72/229 (31.44%), Postives = 123/229 (53.71%), Query Frame = 2 Query: 5 KYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688 K +D+ SI ++GFRGEAL S+ V T+ + TK + G +S G ++ K C GT I V +LFYN+ AR K L++++ + + I D+++R+A+ H+ +SF +G + + + AT + +D+IR +YG + N++ E + D + + GYV N+ + +F+N R ++ + AVE + PF + + + PE VDVNV PT Sbjct: 82 KLQDIYSINTLGFRGEALPSIASVSKTTLKSRTKENEFGREISISGGSVDYI-KDCGTNIGTHIEVRDLFYNVPAREKFLKSTAKEASSISDIVNRLALAHSEISFRLINNG--KRVITTYATDNLIDTIRAIYGKKICDNVISFE--RHTD----LVSVHGYVGNAEISRGSRNNQSIFINKRYIKNKLITAAVENAVKSFMMINKFPFFIIFLDIFPEFVDVNVHPT 301
BLAST of CN189431 vs. ExPASy Swiss-Prot
Match: MUTL_STACT (DNA mismatch repair protein mutL OS=Staphylococcus carnosus (strain TM300) GN=mutL PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24 Identity = 77/227 (33.92%), Postives = 123/227 (54.19%), Query Frame = 2 Query: 14 DLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMENEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQL--EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVVPPEHVDVNVPPT 688 DL I+++GFRGEALAS++ V VT+ T T G G+ + DG + E K A KGT I+VE+LFYN AR K +++ + KI D+++RMA+ H NV F+ + ++ + + +YG+ VA +LV + + S+Y+ +V K + SN +Y++ +F+N R ++ L +A+ Y P Y++I + P VDVNV PT Sbjct: 86 DLFHIRTLGFRGEALASISSVAKVTLRTCTDGQ-SGHEIYAEDGAIL-EQKPAKAKKGTDILVESLFYNTPARLKYVKSLYTELGKITDIVNRMAMSHPNVRFTLTSDDKVLIKTNGSGRTNEV--MAEIYGMKVAKDLVHITGDTSDYH-LEGYVAKPEHSRSNRHYIS------IFINGRYIKNFVLNKAIVEGYHTLLTIGRYPICYINIEMDPILVDVNVHPT 301 The following BLAST results are available for this feature:
BLAST of CN189431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189431 ID=CN189431; Name=CN189431; organism=Citrus sinensis; type=EST; length=690bpback to top |