CX286868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286868 vs. ExPASy Swiss-Prot
Match: DERL1_ARATH (Derlin-1 OS=Arabidopsis thaliana GN=DER1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.026e-40 Identity = 83/130 (63.85%), Postives = 93/130 (71.54%), Query Frame = -3 Query: 267 PNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQ--------------------------PERTTGVAFRGRSYRLSD 578 PN+ I++YGLVTLKAFYLPWAMLALDVIFGSP++PDLLGIIAGHLYYFLTVLHPLATGKN LKTPKWV K+VARWRIGAP + Q P ++ AFRGRSYRL+D Sbjct: 137 PNANISLYGLVTLKAFYLPWAMLALDVIFGSPIMPDLLGIIAGHLYYFLTVLHPLATGKNYLKTPKWVNKIVARWRIGAPVASVRQAGGVGAAGPGAGGGVGGGGAYSSARAPPESSNTAFRGRSYRLTD 266
BLAST of CX286868 vs. ExPASy Swiss-Prot
Match: DER12_MAIZE (Derlin-1.2 OS=Zea mays GN=DER1.2 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.563e-35 Identity = 75/107 (70.09%), Postives = 84/107 (78.50%), Query Frame = -3 Query: 270 PNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIG----APAINRAQPERTTGVAFRGRSYRLS 578 PN+QINIYG++ LKAFYLPW ML LDVIFGSPL+P LLGI+ GHLYY+ VLHPLATGKN LKTPKWV K+VAR+RIG AP A TG AFRGRSYRL+ Sbjct: 137 PNAQINIYGILQLKAFYLPWVMLLLDVIFGSPLMPGLLGIMVGHLYYYFAVLHPLATGKNYLKTPKWVHKIVARFRIGMQANAPVRAPANGNAGTG-AFRGRSYRLN 242
BLAST of CX286868 vs. ExPASy Swiss-Prot
Match: DERL1_ORYSJ (Derlin-1 OS=Oryza sativa subsp. japonica GN=DER1 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 1.661e-34 Identity = 72/105 (68.57%), Postives = 83/105 (79.05%), Query Frame = -3 Query: 270 PNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQP--ERTTGVAFRGRSYRLS 578 PNSQI++YGLV L++FYLPWAML LDVIFGS ++P LLGI+ GH YYFL+VLHPLATGKN LKTP WV K+VAR+RIG A +P T AFRGRSYRLS Sbjct: 137 PNSQISMYGLVQLRSFYLPWAMLGLDVIFGSEILPGLLGILVGHTYYFLSVLHPLATGKNYLKTPMWVHKIVARFRIGVQANAPVRPAAANTGSGAFRGRSYRLS 241
BLAST of CX286868 vs. ExPASy Swiss-Prot
Match: DER11_MAIZE (Derlin-1.1 OS=Zea mays GN=DER1.1 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 3.701e-34 Identity = 73/107 (68.22%), Postives = 85/107 (79.44%), Query Frame = -3 Query: 270 PNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQPERT----TGVAFRGRSYRLS 578 PN+QINIYGLV L++FYLPWAML LDVIFGS L+P LLGI+ GHLYYF VLHPLATGK+ LKTPKWV K+VAR+RIG A + +P +GV FRGRSYRL+ Sbjct: 137 PNAQINIYGLVQLRSFYLPWAMLLLDVIFGSSLMPGLLGIMVGHLYYFFAVLHPLATGKSYLKTPKWVHKIVARFRIGMQANSPVRPPANGNSGSGV-FRGRSYRLN 242
BLAST of CX286868 vs. ExPASy Swiss-Prot
Match: DERL2_DICDI (Probable derlin-2 homolog OS=Dictyostelium discoideum GN=derl2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.787e-12 Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = -3 Query: 363 PNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLV 578 PN I+ GL T A YLPW +L + +F L DLLG +AGH YYFL +PL + + LLKTP +++ L+ Sbjct: 143 PNMHISFLGLFTFSAPYLPWVILIMGYLFNHDLTTDLLGAVAGHAYYFLEDAYPLISNRRLLKTPGFLKNLM 214
BLAST of CX286868 vs. ExPASy Swiss-Prot
Match: DERL2_ORYSJ (Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = -3 Query: 360 PNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 578 P ++ GL T A YLPW +L ++ GS DLLG+IAGH+YYFL ++P TG+ LKTP +++ L A Sbjct: 147 PFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219
BLAST of CX286868 vs. ExPASy Swiss-Prot
Match: DER22_MAIZE (Derlin-2.2 OS=Zea mays GN=DER2.2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = -3 Query: 360 PNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 578 P ++ GL T A YLPW +L ++ GS DLLG+IAGH+YYFL ++P TG+ LKTP +++ L A Sbjct: 147 PFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219
BLAST of CX286868 vs. ExPASy Swiss-Prot
Match: DER21_MAIZE (Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = -3 Query: 360 PNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 578 P ++ GL T A YLPW +L ++ GS DLLG+IAGH+YYFL ++P TG+ LKTP +++ L A Sbjct: 147 PFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219
BLAST of CX286868 vs. ExPASy Swiss-Prot
Match: DERL3_BOVIN (Derlin-3 OS=Bos taurus GN=DERL3 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.402e-11 Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = -3 Query: 363 PNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHP-LATGKNLLKTPKWVQKLV 578 P ++N +GL+T +A +LPWA++ L ++ G+ ++ DLLGI GH+YYFL + P GK LL TP +++ L+ Sbjct: 137 PGVRVNFFGLLTFQAPFLPWALMGLPMLLGNSILVDLLGIAVGHVYYFLEDVFPNQPGGKRLLLTPSFLKLLL 209
BLAST of CX286868 vs. ExPASy Swiss-Prot
Match: DERL3_HUMAN (Derlin-3 OS=Homo sapiens GN=DERL3 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 5.749e-11 Identity = 30/73 (41.10%), Postives = 50/73 (68.49%), Query Frame = -3 Query: 363 PNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHP-LATGKNLLKTPKWVQKLV 578 P ++N +GL+T +A +LPWA++ ++ G+ ++ DLLGI GH+YYFL + P GK LL+TP +++ L+ Sbjct: 137 PRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGHIYYFLEDVFPNQPGGKRLLQTPGFLKLLL 209 The following BLAST results are available for this feature:
BLAST of CX286868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286868 ID=CX286868; Name=CX286868; organism=Citrus clementina; type=EST; length=580bpback to top |