CX286937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286937 vs. ExPASy Swiss-Prot
Match: YVRI_CAEEL (GILT-like protein F37H8.5 OS=Caenorhabditis elegans GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18 Identity = 60/188 (31.91%), Postives = 98/188 (52.13%), Query Frame = 1 Query: 61 CFLSGFVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCI-ESLVYEHKYSH-WETCFDKLELD---PKPIVDCYTSGYGTQLELKYAAETNSLVP-PHQYVPWVVVDGQPL--YEDYEN 600 C + F R + N K+ + + E+LCP NF+ L I + + V++ L P+GNAK+ + T CQHG EC +N E C IDS + P + CI ESL + +++ + CF+KL++ + C S G L+ K AA T ++ P H++VPWV+++G L ++ ++N Sbjct: 58 CGFASFCDKHRAATH--NQKINITVLIEALCPDCQNFLTKQLYPIVFK-NFANYVNIELVPFGNAKVLEDGTIKCQHGEEECSINKFEGCFIDSMQD-QSPLPTLSCIEESLQKKVEFADAVQQCFEKLQIGGDIQRLTQSCLVSKLGADLQNKAAAATANVWPEQHKFVPWVIINGVSLTSFQGFQN 241
BLAST of CX286937 vs. ExPASy Swiss-Prot
Match: GILT_HUMAN (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens GN=IFI30 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 4.223e-18 Identity = 57/159 (35.85%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 121 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAK---IRANSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSHWETCFDKLE--LDPKPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPL 582 V + LYYE+LC F+I L + + ++ I+++ L P+GNA+ + F CQHG EC N VEAC +D ++ F I C+E +E C L P I++C G QL A T++L PPH+YVPWV V+G+PL Sbjct: 73 VNVTLYYEALCGGCRAFLIRELFPTW--LLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL-DMELAFLTIVCMEE--FEDMERSLPLCLQLYAPGLSPDTIMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPL 226
BLAST of CX286937 vs. ExPASy Swiss-Prot
Match: YKJ2_CAEEL (GILT-like protein C02D5.2 OS=Caenorhabditis elegans GN=C02D5.2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.076e-13 Identity = 48/169 (28.40%), Postives = 84/169 (49.70%), Query Frame = 1 Query: 85 ASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANST---FDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSHWETCFDKLELDP---KPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDG 573 A T V + VKL +Y E+ CP ++ F L K ++ + L+ ++L++ P+G A+ CQHGP+EC +N + C ID + +++ P + C++ KYS E E P + + +C + G +L +T SL P ++PW+V++G Sbjct: 127 AGPTIKEPVENIVKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFGFPHRYLPGVLCMQG-----KYSLDEAMKCVTENYPSEYERMRECASGTRGRRLLALSGQKTASLTPAIDFIPWIVING 290 The following BLAST results are available for this feature:
BLAST of CX286937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX286937 ID=CX286937; Name=CX286937; organism=Citrus clementina; type=EST; length=611bpback to top |