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Overview
Name | DY258691 |
Unique Name | DY258691 |
Type | EST |
Organism | Citrus clementina (Clementine) |
Sequence length | 1253 |
Libraries
Library Name | Type |
AbsDev1 | cdna_library |
Analyses
This EST is derived from or has results from the following analyses
Alignments
Feature Name | Type | Location | Analysis |
DY258691_ssr120 |
microsatellite |
DY258691_ssr120:120..134. |
BLAST: Citrus ESTs to Prunus persica proteins V1 |
DY258691_ssr1175 |
microsatellite |
DY258691_ssr1175:1175..1186. |
BLAST: Citrus ESTs to Prunus persica proteins V1 |
Homology
BLAST of DY258691 vs. ExPASy Swiss-Prot
Match: EIF3A_ARATH (Eukaryotic translation initiation factor 3 subunit A OS=Arabidopsis thaliana GN=TIF3A1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.501e-13 Identity = 34/57 (59.65%), Postives = 47/57 (82.46%), Query Frame = 1
Query: 517 EMIPFFDFAVVEKISVEAVKHNFIAMKIDHMKGVVVFCNLGLESAPPLHHLTIFVQN 687
+++PFF F+ VEKISV+AVK+NF+AMK+DHMKGVV+F NLG+ES HL +F ++
Sbjct: 472 QLVPFFQFSEVEKISVDAVKNNFVAMKVDHMKGVVIFGNLGIESDGLRDHLAVFAES 528
The following BLAST results are available for this feature:
Properties
Property Name | Value |
Genbank description | KN0AAI3AB10FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence. |
Sequences
The
following sequences are available for this feature:
EST sequence >DY258691 ID=DY258691; Name=DY258691; organism=Citrus clementina; type=EST; length=1253bp GCAGTTTTGTCCTATGAAGATCCAGCTGCTGCACATGCTGCTGGTGGTTT TTTCCAAGATCATGAAATAAGAGGTTACAAAATCAGTGTGGTGATGGCAG AGAAGACTGCACTGAAAACTGGTGGTGGTGGTGGCGGTGGTAGAGGGGGC TATGGCAATGGTGGAGACAGGCGCAGGGATAATTATAGAGATGGTGGTGG GCCAGATAGACATCAACATGGTGGAAACCGTTCGCGCCCATATTGAAAAA TTTCTCTTTTTATGTACTAGAGAATTATGGTCTGAGAGTTTTTAATTGTG TTACAATCGCGGGATTGTTCTTGAAATGGAGAGGAAAGAGGTAGGTTGTT CACTTATTCAGGATAGACAATACCCCCTTTTTCTCCTTTCTCATTTATCT ACCGCAACGTGGAGGGTAATCTATTCTAGGCGTGGGATTGATTAGTTGTG AATGTTTTTATAGAGGCAAGTGGATAACCAAAATATCTTTGCAGCTATGG TATGATATTTTCAGGTGAAATGATTCCTTTCTTTGATTTTGCTGTCGTGG AGAAAATTTCTGTTGAAGCTGTGAAACATAATTTCATAGCTATGAAAATT GACCATATGAAAGGTGTTGTAGTTTTTTGTAATTTGGGCCTTGAATCTGC ACCTCCTTTGCATCACCTGACTATTTTTGTACAAAACTTTGTTTAAATTG TTTTCCTTGACATATCCGTCCTGCAAATAAAGAATCAAATCTTTGTTTAC CCGCCCGGCCTGCTCTCCGGGAGATGGGAAAAAAAGAACAGAAGAGGCTT TCTTGCCCGAGAACCCCCCCCCCGGCAAAAAGACGAATGAATTTGAACAG CAAAAAAAAAAAAATTGTAACGTGGATGAAAAAAACCCCCCCCGCAAAAA CCAAAAAAAGATTTTTTATTTATTCCAAAGAACAAAAACTCCTTTTTTTT TTATATAAAACCCCTTTGATAAGTGAAAAGAGAAAAAACAAAAAAACCAA GCGCATGCCCGGAGAGGGAAAAAAAACTCCGTGTTGGTGGTTTGGAAACA ACACACAAACCCCCACAAAAAAAAAAAAAAAAGAAAGTTTAATATCTCCC CCCCCCCAAAAAAGAGGAAGTAAATAGAGGAGAAGAAAAAAAAACACCCC GGGGGGGGGGGAGAGCGCCCCCCCCGGCGGCGGCGGGAAGAGAGGGAGGG GGGAGCTAAATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTCTCAT GAA back to top
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