DY258767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258767 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 445.662 bits (1145), Expect = 2.695e-124 Identity = 244/357 (68.35%), Postives = 262/357 (73.39%), Query Frame = 3 Query: 6 SQPVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELIGAAIMHYAAKWLTGLIRXXXXXXXXXXXXXXXXXXXXXXX------------------WKGGLHMIVAGMKDDPPT----------VQAKDQRMIIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAPALVTELEKRVGMQFEQATLADLLIPAYS-KGETLYDVDLVQRLLEHFLVQEQTESSSPSRQSFS-DKHMYDASQRGNGTS----------AKMRVARLVDGYLTEVARDRNLSLTKFQVLAEALPESXRTCDDGLYRAFDSYLKAHPTLSEHERKRLCPGMDCQKLSIDACMHAAQKERIPLKIVVQVLF 956 SQPVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFEL+GA IMHYA KWL GLI+ WKGGLHM+++ K + + KDQRMI+ESLISIIPPQKDSV+CSFLLRLLR ANMLKVAPAL+TELEKRVGMQFEQATL DLLIP Y+ KGET+YDVDLVQRLLEHFLVQEQTE SSPSR S S + MY RGN + AKMRVARLVD YLTEVARDRNL LTKFQVLAEALPES RTCDDGLYRA DSYLKAHPTLSEHERKRLC MDCQKLS+DACMHAAQ ER+PL++VVQVLF Sbjct: 243 SQPVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELLGAVIMHYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSISCGSNSSGGSSGPDWKGGLHMVLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMYDVDLVQRLLEHFLVQEQTEGSSPSRMSPSPSQSMYADIPRGNNNNGGGGGGNNQNAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRAIDSYLKAHPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVVVQVLF 599
BLAST of DY258767 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 391.349 bits (1004), Expect = 6.032e-108 Identity = 217/344 (63.08%), Postives = 247/344 (71.80%), Query Frame = 3 Query: 9 QPVPP-DWWFEDVSILRIDHFVRVITAIKVKGMRFELIGAAIMHYAAKWLTGLIRXXXXXXXXXXXXXXXXXXXXXXXWKGGLHMIV----AGMKDD---PPTVQAKDQRMIIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAPALVTELEKRVGMQFEQATLADLLIPAYS--KGETLYDVDLVQRLLEHFLVQEQTE---SSSPSR---------------QSFSDKHMYDASQRGNGTSAKMRVARLVDGYLTEVARDRNLSLTKFQVLAEALPESXRTCDDGLYRAFDSYLKAHPTLSEHERKRLCPGMDCQKLSIDACMHAAQKERIPLKIVVQVLF 956 Q VPP DWWFEDVS+LRIDHFVRV+TAIKVKGMRF+LIGAAI HYA+KWL GL + GGLHM++ G KDD + +++QRM++ES+ISI PPQ+DSVSC FLLRLLR+A ML+ APALVTELEKRVGMQ EQA LADLLIP+Y +T YDVDLVQRL+EHFLVQEQTE +SSP R S AS G +AK RVARL+D YL+EV+RDRNLSLTKFQVLAE+LPES R CDDGLYRA DSYLKAHPTL+EHERKRLC MDCQKLS DACMHAAQ ER+PL++VVQVLF Sbjct: 262 QAVPPADWWFEDVSVLRIDHFVRVVTAIKVKGMRFDLIGAAITHYASKWLPGLTKDAPLGATHDEPWAQASAAGVGG---GGLHMMIISGAGGGKDDVLAACSAPSREQRMVVESIISITPPQRDSVSCGFLLRLLRLAIMLRAAPALVTELEKRVGMQLEQAALADLLIPSYGGRAADTAYDVDLVQRLVEHFLVQEQTEMAVASSPGRGDPPPPPQPEYYSGRMPPSSAAAASASASTGGLNAKARVARLLDSYLSEVSRDRNLSLTKFQVLAESLPESARACDDGLYRAVDSYLKAHPTLTEHERKRLCRVMDCQKLSFDACMHAAQNERLPLRVVVQVLF 602
BLAST of DY258767 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 2.570e-58 Identity = 133/325 (40.92%), Postives = 188/325 (57.85%), Query Frame = 3 Query: 3 RSQPVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELIGAAIMHYAAKWLTGLIRXXXXXXXXXXXXXXXXXXXXXXXWKGGLHMIVAGMKDDP----PTVQAKDQRMIIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAPALVTELEKRVGMQFEQATLADLLIPAYSKG-ETLYDVDLVQRLLEHFLVQEQTESSSPSR--QSFSDKHMYDASQRGNGTSAKMRVARLVDGYLTEVARDRNLSLTKFQVLAEALPESXRTCDDGLYRAFDSYLKAHPTLSEHERKRLCPGMDCQKLSIDACMHAAQKERIPLKIVVQVLF 956 R + DWW+ED S+L F R+IT ++ +G+R ++I ++ +Y K L GL R +GG +G P + ++Q+ ++E + ++ QK V F + +LR+A +LK +P + LEKR+GMQ +QA L DL++P++S ETLYDVD VQR+L+HFL +Q S D ++ + Q +A VA+L+DGYL EVA D NL L KFQ LA ++PE R DDGLYRA D YLK HP L+E ER+ LC +DCQKLS++AC HAAQ ER+PL+I+VQVLF Sbjct: 207 RPKHTSSDWWYEDASMLSFPLFKRLITVMESRGIREDIIAGSLTYYTRKHLPGLKRR-----------------------RGGPES--SGRFSTPLGSGNVLSEEEQKNLLEEIQELLRMQKGLVPTKFFVDMLRIAKILKASPDCIANLEKRIGMQLDQAALEDLVMPSFSHTMETLYDVDSVQRILDHFLGTDQIMPGGVGSPCSSVDDGNLIGSPQSITPMTA---VAKLIDGYLAEVAPDVNLKLPKFQALAASIPEYARLLDDGLYRAIDIYLKHHPWLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIVQVLF 503
BLAST of DY258767 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 9.787e-50 Identity = 120/312 (38.46%), Postives = 178/312 (57.05%), Query Frame = 3 Query: 24 DWWFEDVSILRIDHFVRVITAIKVKGMRFELIGAAIMHYAAKWLTGLIRXXXXXXXXXXXXXXXXXXXXXXXWKGGLHMIVAGMKDDPPTVQAKDQRMIIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAPALVTELEKRVGMQFEQATLADLLIPAYSK-GETLYDVDLVQRLLEHFLVQEQTESSSPSRQSFSDKHMYDASQRGNGTSAKMRVARLVDGYLTEVARDRNLSLTKFQVLAEALPESXRTCDDGLYRAFDSYLKAHPTLSEHERKRLCPGMDCQKLSIDACMHAAQKERIPLKIVVQVLF 956 DWW ED+S+LRID + RV+ A+K +G+R E IGA+++ YA + LT +++ ++ I+E++++++P + V SFL LLR A +L + + +LE+R+G Q + ATL DLLIP++ G+TL+D+D V R+L +F Q+ + S F + SQ +A +VA+LVD YL E+A D NL L+KF ++AEALP RT DGLYRA D YLKAH LS+ ++K+L +D QKLS +A HAAQ ER+PL+ +VQVL+ Sbjct: 219 DWWIEDLSVLRIDLYQRVMNAMKCRGVRPESIGASLVSYAERELTK---------------------------------------------RSEHEQTIVETIVTLLPVENLVVPISFLFGLLRRAVILDTSVSCRLDLERRLGSQLDMATLDDLLIPSFRHAGDTLFDIDTVHRILVNFS-QQGGDDSEDEESVFECDSPHSPSQ-----TAMFKVAKLVDSYLAEIAPDANLDLSKFLLIAEALPPHARTLHDGLYRAIDLYLKAHQGLSDSDKKKLSKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLY 479
BLAST of DY258767 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 2.582e-42 Identity = 105/314 (33.44%), Postives = 168/314 (53.50%), Query Frame = 3 Query: 18 PPDWWFEDVSILRIDHFVRVITAIKVKGMRFELIGAAIMHYAAKWLTGLIRXXXXXXXXXXXXXXXXXXXXXXXWKGGLHMIVAGMKDDPPTVQAKDQRMIIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAPALVTELEKRVGMQFEQATLADLLIPAYS-KGETLYDVDLVQRLLEHFLVQEQTESSSPSRQSFSDKHMYDASQRGNGTSAKMRVARLVDGYLTEVARDRNLSLTKFQVLAEALPESXRTCDDGLYRAFDSYLKAHPTLSEHERKRLCPGMDCQKLSIDACMHAAQKERIPLKIVVQVLF 956 PP+WW E++ IL +D F V++++K +G++ + +AI+ Y K L L+R G+ G D + + QR +++S++S++P K +FL LLR A L + ELEKR+ + E ++ DLLIP+++ GE L D+D V+R++ F+ +E+ RG + + RVA+ VD YL E+A +L+++KF +A +P+S R DD LYRA D +LKAHP L E ER+++C MD KLS DA +HA+Q +R+P+ IV+ L+ Sbjct: 185 PPNWWTEELCILDVDFFSDVVSSMKQRGVKPSSLASAIITYTEKSLRDLVRDHSGR---------------------GVKYSDPG---DNESDERSQQRDLVQSIVSLLPSDKGLFPVNFLCSLLRCAVFLDTSLTCKNELEKRISVVLEHVSVDDLLIPSFTYDGERLLDLDSVRRIISAFVEKEKNVGVFNGGD----------FNRGVCSVSLQRVAKTVDSYLAEIATYGDLTISKFNAIANLVPKSARKSDDDLYRAIDIFLKAHPNLDEIEREKVCSSMDPLKLSYDARLHASQNKRLPVNIVLHALY 464 The following BLAST results are available for this feature:
BLAST of DY258767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258767 ID=DY258767; Name=DY258767; organism=Citrus clementina; type=EST; length=1238bpback to top |