gene-KPL71_018601-mRNA1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of gene-KPL71_018601-mRNA1 vs. DB:SwissProt
Match: PUB24_ARATH (E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 SV=1) HSP 1 Score: 380.178 bits (975), Expect = 3.934e-116 Identity = 207/457 (45.30%), Postives = 285/457 (62.36%), Query Frame = 2 Query: 2942 HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDLWKPELQT----KTLIRLEVFAAENERNRKCMAEAGVPRALLTYIVKCCDKNQVG-----GLEGALIILHFFKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKE---IKSHALRILKNIIQAASSKFLQRLKPQFFQNIIRVLKQRV----------------------------------IAQQGVNAALQLMLDACPSGRNRMMMVESGAVFELIELELT-ASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEMLRVGTVSKLCSFLQVDCAAYLKDKAREILRSHYDEWKDSPCIDASVLSRLI 4171
++IEIP YFICPISL+IMKDPVT ++GITYDR++I WL CPVTKQPLP D DLTPNH LRRLIQ WC +N G+ RI TP+ P KL +++ IK+L K + +TL +LEV A + NR+ M E GV ++L+ ++VKC +++ G GL+ +L +LH I S K E D+++ES TWVL H+E K++ + +L+N+ + SS ++RL P+ F+ II LK V + +Q V AAL ++L+ RNR ++V+ GAV ELIELE++ EK+ TEL+LG+L LC CA+GRA+ L+HR IAVVTKR+++VSPAADDRAI IL+ + KFS N VV+EM+ VGTV KLCS L +DC LK+KA+EIL+ H+DEWK PCID ++L++L+
Sbjct: 5 EEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL---EKVPSCPVTKQPLPLDSDLTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREETLQKLEVLAMDG-NNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIGIPSNDAKTILMENDRVMESLTWVL---------HQEDFLSKAYTIVLLRNLTEYTSSHIVERLNPEIFKGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILLETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPE-NMVVEEMVNVGTVEKLCSVLGMDCGLNLKEKAKEILKDHFDEWKKFPCIDITLLTKLL 447
BLAST of gene-KPL71_018601-mRNA1 vs. DB:SwissProt
Match: PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 9.903e-96 Identity = 178/412 (43.20%), Postives = 260/412 (63.11%), Query Frame = 2 Query: 2945 QDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDLWKP-ELQTKTLIRLEVFAAENERNRKCMAEAGVPRALLTYIVKCCDKNQVGGLEGALIILHFFKITSEYM---KLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQFFQNIIRVLKQRVIAQQGVNAALQLMLDACPSGRNRMMMVESGAVFELIEL---ELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEMLRVGTVSKLCSFLQVDCAAYLKDKAREILRSHYDEWKDSPCIDASVL 4159
++IEIP +F+CPISL+IMKDPV TGITYDR+SIE WLF G N+ CPVTKQ + D DLTPNHTLRRLIQ+WC N++YG++RIPTP+ P+ K +I KLI+D E Q K L RL +EN N++C+ AGVP L + + ++ G L + L + TSE + L+ + + IV+S T ++ E + +A +LKNI++ A LKP+ F ++++L R I+Q+ AA+ ++++ CP GRNR VE+G + +IEL E SE++ E+ + +L LC CA+GRA+FL+H AAIAVV K+I++VS A DRA+ +L + +F ++ EML++G V+KLC LQV C K+KA+E+L+ H WKDSPC+ +++
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNS-CPVTKQDI-TDADLTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIVSENATNKRCLEAAGVPEFLANIV---SNDSENGSLTDEALNLLYHLETSETVLKNLLNNKKDNNIVKSLTKIMQ------RGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDR-ISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCAT-PALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMI 406
BLAST of gene-KPL71_018601-mRNA1 vs. DB:SwissProt
Match: PUB22_ARATH (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.553e-84 Identity = 169/433 (39.03%), Postives = 256/433 (59.12%), Query Frame = 2 Query: 2945 QDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDLWKPEL-QTKTLIRLEVFAAENERNRKCMAEAGVPRALLTYIVKC-------------------CDKNQVGG--------LEGALIILHFFKITSEYMK--LSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQFFQNIIRVLKQRVIAQQGVNAALQLMLDACPSGRNRMMMVESGAVFELIEL---ELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEMLRVGTVSKLCSFLQVDCAAYLKDKAREILRSHYDEWKDSPCI 4144
Q+IEIP +F+CPISL IMKDPV TGITYDRESIE WLF G N+ CPVTKQ + + DLTPNHTLRRLIQ+WC N++YGI+RIPTPK P+ K +I KLIK+ L Q K L RL +EN N++C+ A VP L + C N + ++ AL +L+ + +K L+ + +V++ T ++ E +++A +LK +++ A + L+ + F +I++L + I+ + +A+Q+++ CP GRNR VE G + +IEL + +SE++ +E+ + +L LC CA+GRA+FL+H AAIAVV+K+I++VS +RA+ +L + +F + +QEML++G V+KLC LQV C K+KA+E+L+ H W++SPC+
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNS-CPVTKQVI-TETDLTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQ------RGIYESRAYAALLLKKLLEVADPMQIILLERELFGEVIQILHDQ-ISHKATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLSVGRFCATPSL-LQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRESPCV 425
BLAST of gene-KPL71_018601-mRNA1 vs. DB:SwissProt
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.312e-40 Identity = 122/402 (30.35%), Postives = 192/402 (47.76%), Query Frame = 2 Query: 2951 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDLW-------KPELQTKTLIRLEVFAAENERNRKCMAEAGVPRALLTYIVKCCDKNQVGGLEGALIILHFFKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHAL-RILKNIIQAASSKFLQRLKPQFFQNIIRVLKQRVIAQQGVNAALQLMLDACPSGRNRMMMVESGAVFELIELELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEMLRVGTVSKLCSFLQVDCAAYLKDKAREILRSHYDEWKD 4132
I+IP +F CPISL++M+DPVT TG TYDR SIE W+ GNN CPVT+ PL D L PNHTLRRLIQ WC N + G++RIPTPK P + L+ + L RL FA ++++NR +A L+ + +++ + +L +L IT +S VE T +L D SIE + + AL I+ ++A K F+ ++ +L+ + +++ + ++ + C R + + +GA LI+ ++ TE L + LC +G A F H + ++ K I++VS A + A L +C + +E G V +L +Q +C K KA+++L+ D W D
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTT-CPVTRAPL-SDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSEL--VSESLALLVMLPITEPNQFVSISSDPGRVEFLTRLLF--DSSIETR--VNAAALIEIVSTGTKSADLKGSISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERWR---EEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPD 402
BLAST of gene-KPL71_018601-mRNA1 vs. DB:SwissProt
Match: PUB20_ARATH (U-box domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=PUB20 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 4.095e-38 Identity = 124/429 (28.90%), Postives = 197/429 (45.92%), Query Frame = 2 Query: 2948 DIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDLWKPELQ------TKTLIRLEVFAAENERNRKCMAEAGVPRALLTYIVKCCDKNQVGGLEGALIILHFFKITSEYMKLSAFEIDKIVESFTWVL--ALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQFFQNIIRVLKQRVIAQQGVNAALQLMLDACPSGRN------RMMMVESGAVFELIELELTA--------SEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEMLRVGTVSKLCSFLQVDCAAYLKDKAREILRSHYDEWKDSPCIDASVLSRL 4168
+I IP F CPIS ++MKDPV +GITYDRE+IE W G CPVT L L+ PNHT+RR+IQ WC + GI+RIPTP+ P++ Q+ ++ + L + + + ++ E+ERNRKC+ E G L++ F SE S +++ V TW+L L+ +S + + +L+N Q A+ FL +K N+ V + GV A ++ + N M++ V +EL+L SE E L +L +C +GR + ++ I ++ K+I+++S D + ++ +CK SG+ + V+E LR+G KL LQV C K+K E+L+ K + +D S S +
Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQT--CPVTNTVLT-SLEQIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENG----------------------AGLVLCVCFDAFSENANASLL-LEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRNGDQNAA--FL--IKELLELNVTHV--HALTKINGVQEAFMKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSVMWKVCK-SGDGSE-VEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMKMNGFVDRSYSSSI 422
BLAST of gene-KPL71_018601-mRNA1 vs. DB:SwissProt
Match: PUB26_ARATH (U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 4.862e-36 Identity = 122/420 (29.05%), Postives = 194/420 (46.19%), Query Frame = 2 Query: 2951 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKD---LWKPELQTKT----LIRLEVFAAENERNRKCMAEAGVPRALLTYIVKCCDKN-----QVGGLEGALIILHFFKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASS---KFLQRLKPQFFQNIIRVLKQRVIAQQGVNAALQLMLDACPSGRNRMMMVESGAVFELIELELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEMLRVGTVSKLCSFLQVDCAAYLKDKAREILRSHYDEWKDSPCIDASVLSR 4165
I+IP +F CPISL +M DPVT TG TYDR SI+ W+ GN CPVT+ L D L PNHTLRRLIQ WC N + G++RIPTPK P + + L+ + + ++ + RL A ++E+NR +A L+ + + V L++LH + E A D F L L D SI EI+ +A +++ ++ A S K + F+ ++ +LK + +++ + ++ + C + R + + +GA LI+ ++ TE L + LC +G A F H + ++ K I++VS A + A L +C E G V++L +Q DC K KA+ +L+ D W D + + +R
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTT--CPVTRVAL-SDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTETECE-----AVASDPSRVGFMTRL-LFDSSI----EIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEERCR---DEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDFNR 415
BLAST of gene-KPL71_018601-mRNA1 vs. DB:SwissProt
Match: PUB21_ARATH (U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.508e-32 Identity = 122/431 (28.31%), Postives = 198/431 (45.94%), Query Frame = 2 Query: 2942 HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDLWKPELQTK------TLIRLEVFAAENERNRKCMAEAGVPRALLTYIVKCCDKNQVGGLEGALIILHFFKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQFFQNIIRVLKQRV---IAQQGVNAAL-QLMLDACPSGRN--------RMMMVESGAVFELIELELTA--------SEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFV-VQEMLRVGTVSKLCSFLQVDCAAYLKDKAREILRSHYDEWK-DSPCIDA 4150
+I IP F CPIS+ +MKDPV TGITYDR SIE W+ GN CPVT L D PNHT+R++IQ WC + + I RIPTP+ PL ++ ++ + L + + +++ E+E+NRKC+ E V L C DK G E K+T F +++I+ TW+ + E I K + + R + ++++ Q + I+ + + RV + GV AL +L+ D+ S +M++ + E +E+ L + +E E L +L +C GR + + + ++ K+I +VS A + +S+I K N V V++ +R+G K+ LQV K+KA E+L+ + K S C+D+
Sbjct: 26 ESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKT--CPVTNTVL-TTFDQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIKKLGDESEKNRKCVNENSVGWVL----CDCFDK--FSGDE---------KLT--------FMLNEILSLLTWMFPIGLEGI--SKLASATSFRCVAGLLKSTDDSVRQN-AAFIMKEILSLDETRVHSFAVENGVAEALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSS---MSMILKLWKTGNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMKLMSDCVDS 424
BLAST of gene-KPL71_018601-mRNA1 vs. DB:SwissProt
Match: PUB29_ARATH (U-box domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=PUB29 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.381e-24 Identity = 104/399 (26.07%), Postives = 190/399 (47.62%), Query Frame = 2 Query: 2951 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCAD-----NSAYGIDRIPTPKAPLSKLQIIKLIKDLWKPELQTKTLIRLEVFAAENERNRKCMAEAGVPRALLTYIVKCCDKNQVGGLEGALIILHFFKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQFFQNIIRVLKQRVIAQQG----VNAALQLMLDACPSGRNRMMMVESGAVFELIELELTA--SEKKTTELILGILFHLCSCADGRAQFLSHRAAIAV--VTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEMLRVGTVSKLCSFLQVDCAAYLKDKAREILR 4108
I +P +F CPISL +M+ PV+ TG+TYDR SI+ WL GNN CP T Q L K D PN TL+RLI W N + P+ + +K ++ L++ L E L+++ F +++ NR+ +++ +L I++ K ++ + A+ IL K+ E + D +LA+ ++E+ K ++R+L I A SK + + +++ + I + + A+L ++ S R R ++ + A+ ++ ++ LT + TE L +L L S +GR + V V K++++VS A + A+ IL +C V + + R V+KL +Q +C+A ++ A+++++
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNT--CPATMQ-LLKTKDFVPNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLE----NLMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIR-TKKTKIELVIMAIRILDSIKVDRERLSNLMLANDGGDCLTAILLAIQRGNLES----KIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSIS---ITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIK 393
BLAST of gene-KPL71_018601-mRNA1 vs. DB:SwissProt
Match: PUB30_ARATH (U-box domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=PUB30 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.076e-22 Identity = 106/407 (26.04%), Postives = 190/407 (46.68%), Query Frame = 2 Query: 2954 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDLWKPELQTKTLIRLEVFAAENERNRKCMAEAGVPRALLTYIVKCCDKNQVGGLEGALIILHFFKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQFFQNIIRVLKQRVIAQQGVNAALQLMLDACPSGRNRMMMVESGAVFELIELELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEMLRVGTVSKLCSFLQVDCAAYLKDKAREILRSHYDEWKDSPCIDASVLSRLIR 4174
+IP FICPISL+ M+DPVT TG TY+R +I W G + CP T Q L D +TPN TL LI W + Y + + + ++I+ +K K + + L L+ + RK + E G ++++ ++ + VG A+++ S+ + ++ IV+ L+D S E K + R+++ +++ + ++R++K + + GV+ AL+L+ + R +MV GAV +L+++ L + + + EL L +L LC+ +GR I + +M+VS + A+ IL +CK + + + VG +KL +Q C A LK ++ E+L+ + D+ I L+R I+
Sbjct: 63 DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLG--HLTCPTTMQELWDD-TVTPNKTLHHLIYTWFSQK--YVLMKKRSEDVQGRAIEILGTLKKA-KGQARVHALSELKQIVIAHLMARKTVVEEG-GVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQPAKVSLIVD------MLNDGS----NETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKR-HRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDI-LPSLDPECLELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEECSPLA--VEVGLAAKLLLVIQSGCDAALKQRSAELLKLCSLHYSDTMFISKCKLTRTIQ 448
BLAST of gene-KPL71_018601-mRNA1 vs. DB:SwissProt
Match: PUB75_ORYSJ (U-box domain-containing protein 75 OS=Oryza sativa subsp. japonica OX=39947 GN=TUD1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.011e-20 Identity = 112/399 (28.07%), Postives = 177/399 (44.36%), Query Frame = 2 Query: 2936 DGHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCA-------DNSAYGIDRIPTPKAPLSKLQIIKLIKDLWKPELQTKTLIRLEVFAAENERNRKCMAEAGVPRALLTYIVKCCDKNQVGGLEGALIILHFFKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQFFQNIIRVLKQRVIAQQGVNAALQLMLDACPSGR-NRMMMVESGAVFELIELELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEMLRVGTVSKLCSFLQVDCAAYLKDKAREILR 4108
DG D +P FICPISL+ M DPVT TG TY+ +I WL G+ CP T Q L D+ PN TLR+LI AW + SA R L + K + K + + L L AA ++ K +AEAG LLT ++ + VG E I++ + ++ K + + K V L D E + K + +R+++ +++ + ++R+++ + GV A L+L+ C + R ++V GAV +L+EL L + E L IL L + +GR I + +M+VS A RA+ +L ++C+ + L G +KL +Q C LK +A E+L+
Sbjct: 58 DGGGDEAVPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRT--CPTTMQEL-WDVTPIPNTTLRQLIAAWFSRRYTRFKKRSADFHGRAAELVHALRGTAVPK--RQPLKGQARVAALRELRSLAAAHQSVTKAIAEAG-GVGLLTSLLGPFTSHAVGS-EAVAILVSGVPLDADA-KAALMQPAK-------VSLLVDMLNEGAVDTKINCVRLIRILMEEKGFRPDTVASLSLLVGVMRLVRDKR-HPDGVAAGLELLNSICAVHKPARSLIVSIGAVPQLVEL-LPELPTECVEPALDILDALAAVPEGRIALKDCPRTITNAVRLLMRVSEACTRRALSMLWVVCRMA--PEECAPAALDAGLGAKLLLVIQSGCGPELKQQASELLK 437 The following BLAST results are available for this feature:
BLAST of gene-KPL71_018601-mRNA1 vs. DB:SwissProt
Analysis Date: 2023-04-17 (BLAST: C. sinensis DVS_B v1.0) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro: C. sinensis DVS_B v1.0
Date Performed: 2023-04-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >gene-KPL71_018601-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018601-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018601-mRNA1; organism=Citrus sinensis; type=mRNA; length=5958bpback to top protein sequence of gene-KPL71_018601-mRNA1_Citrus_sinensis_DVS_B_v1 >gene-KPL71_018601-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018601-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018601-mRNA1_Citrus_sinensis_DVS_B_v1; organism=Citrus sinensis; type=polypeptide; length=414bpback to top mRNA from alignment at CM039175.1_Chr6_DVS_B:19593570..19599599- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=6030bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19593570..19599599- (Citrus sinensisback to top Coding sequence (CDS) from alignment at CM039175.1_Chr6_DVS_B:19593570..19599599- >gene-KPL71_018601-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018601-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018601-mRNA1; organism=Citrus sinensis; type=CDS; length=1245bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19593570..19599599- (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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