CMJ_chr8_019180.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Match: V4SGX6|V4SGX6_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029483mg PE=4 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 8.031e-110 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 Query: 1 MANPNAPPTALPLPRPLYKQRSWAPDAEREEAWLRRKGNHQIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGELN 154
MANPNAPPTALPLPRPLYKQRSWAPDAEREEAWLRRKGNHQIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIIDPGDGPETVK+RLKQWAQVVACSVRQFSGELN
Sbjct: 1 MANPNAPPTALPLPRPLYKQRSWAPDAEREEAWLRRKGNHQIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIIDPGDGPETVKMRLKQWAQVVACSVRQFSGELN 154
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Match: A0A067F971|A0A067F971_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g046700mg PE=4 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 8.031e-110 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 Query: 1 MANPNAPPTALPLPRPLYKQRSWAPDAEREEAWLRRKGNHQIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGELN 154
MANPNAPPTALPLPRPLYKQRSWAPDAEREEAWLRRKGNHQIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIIDPGDGPETVK+RLKQWAQVVACSVRQFSGELN
Sbjct: 1 MANPNAPPTALPLPRPLYKQRSWAPDAEREEAWLRRKGNHQIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIIDPGDGPETVKMRLKQWAQVVACSVRQFSGELN 154
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Match: A0A2H5PRA5|A0A2H5PRA5_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_160270 PE=4 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 4.697e-89 Identity = 147/153 (96.08%), Postives = 147/153 (96.08%), Query Frame = 0 Query: 4 PNAPPTA--LPLPRPLYKQRSWAPDAEREEAWLRRKGNHQIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGELN 154
PN P LPLPRPLYKQRSWAPDAEREEAWLRRKGNHQIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGELN
Sbjct: 1 PNHSPKEARLPLPRPLYKQRSWAPDAEREEAWLRRKGNHQIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGELN 153
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Match: A0A397L523|A0A397L523_BRACM (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRARA_K00968 PE=4 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 6.239e-63 Identity = 101/145 (69.66%), Postives = 118/145 (81.38%), Query Frame = 0 Query: 12 PLPRPLYKQRSWAPDAEREEAWLRRKGNH-QIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDND-SVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGELN 154
P PRPL KQ SW+PDA+REEAWLR+KG R RS+SVTDEDL+ELKG IELGFGF+ DSPELDP+L++TLPALG YCAVNK Y LSR SS SS+ S+ + S S ++I+D GD PET+K+RLKQWAQVVACSVRQFSGE N
Sbjct: 11 PPPRPLIKQHSWSPDADREEAWLRKKGKRPSGRLGRSKSVTDEDLEELKGCIELGFGFEPDSPELDPRLSETLPALGLYCAVNKQYRSGLSRTSSLSSVASEGEVSNSSTTIVDQGDDPETMKLRLKQWAQVVACSVRQFSGEPN 155
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Match: M4DM88|M4DM88_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 6.239e-63 Identity = 101/145 (69.66%), Postives = 118/145 (81.38%), Query Frame = 0 Query: 12 PLPRPLYKQRSWAPDAEREEAWLRRKGNH-QIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDND-SVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGELN 154
P PRPL KQ SW+PDA+REEAWLR+KG R RS+SVTDEDL+ELKG IELGFGF+ DSPELDP+L++TLPALG YCAVNK Y LSR SS SS+ S+ + S S ++I+D GD PET+K+RLKQWAQVVACSVRQFSGE N
Sbjct: 11 PPPRPLIKQHSWSPDADREEAWLRKKGKRPSGRLGRSKSVTDEDLEELKGCIELGFGFEPDSPELDPRLSETLPALGLYCAVNKQYRSGLSRTSSLSSVASEGEVSNSSTTIVDQGDDPETMKLRLKQWAQVVACSVRQFSGEPN 155
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Match: A0A0D3DHK8|A0A0D3DHK8_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 GN=106304445 PE=4 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 7.766e-63 Identity = 101/145 (69.66%), Postives = 118/145 (81.38%), Query Frame = 0 Query: 12 PLPRPLYKQRSWAPDAEREEAWLRRKGNH-QIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDND-SVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGELN 154
P PRPL KQ SW+PDA+REEAWLR+KG R RS+SVTDEDL+ELKG IELGFGF+ DSPELDP+L++TLPALG YCAVNK Y LSR SS SS+ S+ + S S ++I+D GD PET+K+RLKQWAQVVACSVRQFSGE N
Sbjct: 11 PPPRPLIKQHSWSPDADREEAWLRKKGKRPSGRLGRSKSVTDEDLEELKGCIELGFGFEPDSPELDPRLSETLPALGLYCAVNKQYRSGLSRTSSLSSVASEGEVSNSSTTIVDQGDDPETMKLRLKQWAQVVACSVRQFSGEPN 155
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Match: A0A6J0N7S9|A0A6J0N7S9_RAPSA (uncharacterized protein LOC108851601 OS=Raphanus sativus OX=3726 GN=LOC108851601 PE=4 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.009e-62 Identity = 100/145 (68.97%), Postives = 118/145 (81.38%), Query Frame = 0 Query: 12 PLPRPLYKQRSWAPDAEREEAWLRRKGNH-QIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDND-SVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGELN 154
P PRPL KQ SW+PDA+REEAWLR+KG R RS+SVTDEDL+ELKG IELGFGF+ DSPELDP+L++T+PALG YCAVNK Y LSR SS SS+ S+ + S S ++I+D GD PET+K+RLKQWAQVVACSVRQFSGE N
Sbjct: 11 PPPRPLIKQHSWSPDADREEAWLRKKGKRPSGRLGRSKSVTDEDLEELKGCIELGFGFEPDSPELDPRLSETIPALGLYCAVNKQYRSGLSRTSSLSSVASEGEVSNSSTTIVDQGDDPETMKLRLKQWAQVVACSVRQFSGEPN 155
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Match: A0A061E7P6|A0A061E7P6_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_007071 PE=4 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.727e-61 Identity = 107/140 (76.43%), Postives = 122/140 (87.14%), Query Frame = 0 Query: 15 RPLYKQRSWAPDAEREEAWLRRKGNHQIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGELN 154
R LYKQRSW+PDAER+EAWLRRKG++ + RRSQSVT++DLQELKG IELGFGF+ DSPELDPKL+DTLPAL FYCAVN+ Y+ RLSR SS+SSI S ND+ S S+IID GD PETVK RL+QWAQVVACSVRQFSGE N
Sbjct: 16 RHLYKQRSWSPDAERDEAWLRRKGSYGVGLRRSQSVTNDDLQELKGCIELGFGFEPDSPELDPKLSDTLPALPFYCAVNRQYSGRLSRSSSTSSIGSFNDAGSSSTIIDHGDDPETVKTRLRQWAQVVACSVRQFSGEPN 155
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Match: A0A3P6EXT4|A0A3P6EXT4_BRAOL (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLC7T46451H PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.464e-61 Identity = 101/146 (69.18%), Postives = 118/146 (80.82%), Query Frame = 0 Query: 12 PLPRPLYKQRSWAPDAEREEAWLRRKGNH-QIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDND-SVSCSSIID-PGDGPETVKVRLKQWAQVVACSVRQFSGELN 154
P PRPL KQ SW+PDA+REEAWLR+KG R RS+SVTDEDL+ELKG IELGFGF+ DSPELDP+L++TLPALG YCAVNK Y LSR SS SS+ S+ + S S ++I+D GD PET+K+RLKQWAQVVACSVRQFSGE N
Sbjct: 11 PPPRPLIKQHSWSPDADREEAWLRKKGKRPSGRLGRSKSVTDEDLEELKGCIELGFGFEPDSPELDPRLSETLPALGLYCAVNKQYRSGLSRTSSLSSVASEGEVSNSSTTIVDQEGDDPETMKLRLKQWAQVVACSVRQFSGEPN 156
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Match: A0A3P6A9V9|A0A3P6A9V9_BRACM (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA03T15321Z PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.739e-61 Identity = 101/146 (69.18%), Postives = 118/146 (80.82%), Query Frame = 0 Query: 12 PLPRPLYKQRSWAPDAEREEAWLRRKGNH-QIRRRRSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDND-SVSCSSIID-PGDGPETVKVRLKQWAQVVACSVRQFSGELN 154
P PRPL KQ SW+PDA+REEAWLR+KG R RS+SVTDEDL+ELKG IELGFGF+ DSPELDP+L++TLPALG YCAVNK Y LSR SS SS+ S+ + S S ++I+D GD PET+K+RLKQWAQVVACSVRQFSGE N
Sbjct: 11 PPPRPLIKQHSWSPDADREEAWLRKKGKRPSGRLGRSKSVTDEDLEELKGCIELGFGFEPDSPELDPRLSETLPALGLYCAVNKQYRSGLSRTSSLSSVASEGEVSNSSTTIVDQEGDDPETMKLRLKQWAQVVACSVRQFSGEPN 156
BLAST of CMJ_chr8_019180.1 vs. Araport11
Match: AT4G33985.1 (| membrane insertase%2C putative (DUF1685) | Chr4:16288301-16288857 REVERSE LENGTH=154 | 201606) HSP 1 Score: 187.963 bits (476), Expect = 7.413e-62 Identity = 105/156 (67.31%), Postives = 126/156 (80.77%), Query Frame = 0 Query: 1 MANPNAPPTALPLPRPLYKQRSWAPDAEREEAWLRRKGNHQIRRR-RSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDND-SVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGELN 154
M+ NAP A P RPL KQ SW+PDA+REEAWLR+KG + R RS+SVTDEDL+ELKG IELGFGF+ DSP+LDP+L++TLPALG YCAVNK Y+ RLSR SS SSI S+ + S S ++I+D GD PET+K+RLKQWAQVVACSV+QFSGE N
Sbjct: 1 MSKRNAPFQAPP--RPLVKQHSWSPDADREEAWLRKKGKQSLGRLGRSKSVTDEDLEELKGCIELGFGFEPDSPDLDPRLSETLPALGLYCAVNKQYSSRLSRTSSLSSIASEGENSNSSTTIVDQGDDPETMKLRLKQWAQVVACSVKQFSGEPN 154
BLAST of CMJ_chr8_019180.1 vs. Araport11
Match: AT2G15590.2 (| spire%2C putative (DUF1685) | Chr2:6801950-6802506 FORWARD LENGTH=155 | 201606) HSP 1 Score: 150.984 bits (380), Expect = 2.978e-47 Identity = 73/140 (52.14%), Postives = 104/140 (74.29%), Query Frame = 0 Query: 14 PRPLYKQRSWAPDAEREEAWLRRKGNHQIRRR-RSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFSGE 152
PRPL KQ SW+PD REEAWLR+K + RS+SVT++D++ELKG ELGFGF+ +SP+L+P+L+ T+PAL YCAV++ Y++ LSR SS +S ++S + ++I+D GD +T+K +LKQWA+VV SVR SG+
Sbjct: 9 PRPLMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDDIEELKGCFELGFGFETESPDLNPRLSHTIPALDLYCAVHRQYSNHLSRTSSFASDHEVSNSNNITTIVDKGDDRKTMKQKLKQWAKVVGFSVRHSSGK 148
BLAST of CMJ_chr8_019180.1 vs. Araport11
Match: AT2G15590.1 (| spire%2C putative (DUF1685) | Chr2:6801950-6802403 FORWARD LENGTH=125 | 201606) HSP 1 Score: 119.783 bits (299), Expect = 2.059e-35 Identity = 57/111 (51.35%), Postives = 83/111 (74.77%), Query Frame = 0 Query: 14 PRPLYKQRSWAPDAEREEAWLRRKGNHQIRRR-RSQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSICSDNDSVSCSSIID 123
PRPL KQ SW+PD REEAWLR+K + RS+SVT++D++ELKG ELGFGF+ +SP+L+P+L+ T+PAL YCAV++ Y++ LSR SS +S ++S + ++I+D
Sbjct: 9 PRPLMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDDIEELKGCFELGFGFETESPDLNPRLSHTIPALDLYCAVHRQYSNHLSRTSSFASDHEVSNSNNITTIVD 119
BLAST of CMJ_chr8_019180.1 vs. Araport11
Match: AT3G50350.2 (| membrane insertase%2C putative (DUF1685) | Chr3:18672164-18673665 FORWARD LENGTH=171 | 201606) HSP 1 Score: 115.931 bits (289), Expect = 2.549e-33 Identity = 72/135 (53.33%), Postives = 92/135 (68.15%), Query Frame = 0 Query: 17 LYKQRSWAPDAEREEAWLRRKGNHQIRR-RRSQSVTDEDLQELKGSIELGFGFQADSPE-LDPKLTDTLPALGFYCAVNKHYNDRLS-RCSSSSSICSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQ 148
L Q SW+PD REEAW +R+ + R RR +S+TDEDL ELK S ELGFGF SPE DP+L++TLPAL Y AV K YND +S + ++SSS SD D+ ++ D P+TVK +LKQWA+VVAC+V Q
Sbjct: 35 LNTQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLDELKASFELGFGF--GSPENADPRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSDGDTSPHHTVYQTSDDPQTVKTKLKQWARVVACTVNQ 167
BLAST of CMJ_chr8_019180.1 vs. Araport11
Match: AT2G15610.1 (| hypothetical protein (DUF1685) | Chr2:6806033-6806686 FORWARD LENGTH=153 | 201606) HSP 1 Score: 100.523 bits (249), Expect = 1.889e-27 Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 0 Query: 1 MANPNAPPTALPLPRPLYKQRSWAPDAEREEAWLRRKGNH-QIRRRRSQS-VTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSS 108
M+N N P P+PL KQ+S PD REEAWLR K H R RS+S VT++D++EL+G +LGFGF+ DS + +P L+ T+PAL Y A+++ Y++ LSR SS+S
Sbjct: 1 MSNQNKPQP----PKPLMKQQSLPPDINREEAWLRMKKKHPSARLHRSKSCVTNDDIEELRGCFDLGFGFEPDSLDFNPSLSKTIPALDLYSAIHRQYSNHLSRTWSSTS 106
BLAST of CMJ_chr8_019180.1 vs. Araport11
Match: AT3G50350.1 (| membrane insertase%2C putative (DUF1685) | Chr3:18672906-18673706 FORWARD LENGTH=181 | 201606) HSP 1 Score: 93.2041 bits (230), Expect = 2.766e-24 Identity = 55/95 (57.89%), Postives = 65/95 (68.42%), Query Frame = 0 Query: 10 ALPLPRP-LYKQRSWAPDAEREEAWLRRKGNHQIRR-RRSQSVTDEDLQELKGSIELGFGFQADSPE-LDPKLTDTLPALGFYCAVNKHYNDRLS 101
A PLP L KQ SW+PD REEAW +R+ + R RR +S+TDEDL ELK S ELGFGF SPE DP+L++TLPAL Y AV K YND +S
Sbjct: 31 APPLPSTSLLKQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLDELKASFELGFGF--GSPENADPRLSNTLPALELYFAVQKSYNDAVS 123
BLAST of CMJ_chr8_019180.1 vs. Araport11
Match: AT1G08790.1 (| 1-phosphatidylinositol-4%2C5-bisphosphate phosphodiesterase epsilon-1%2C putative (DUF1685) | Chr1:2811989-2812646 FORWARD LENGTH=190 | 201606) HSP 1 Score: 90.8929 bits (224), Expect = 2.255e-23 Identity = 68/168 (40.48%), Postives = 85/168 (50.60%), Query Frame = 0 Query: 4 PNAPPTALPLPRPLYKQRSWAPDAEREEAWLRRKGN--HQIRRRR--SQSVTDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLS-----------------RCSSSSSICSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQFS 150
P PP A R L KQ S + R+ AW RR+ H + + +TDEDL ELKGSIELGFGF + + LT TLPAL Y AV + + + R SS S SD+DS+ ++ PGD P+ VK RL+ WAQ VACSV Q S
Sbjct: 30 PLEPPKAKAKKR-LSKQLSML-ETRRDIAWERRRRQMLHHLEKHNEGGDDLTDEDLSELKGSIELGFGFNEEQGQ---HLTTTLPALDLYFAVTRQISPVSTPGSGGSSSSSRPTSLGDRSSSFGSPISDSDSLK---VMSPGDDPQQVKTRLRHWAQAVACSVIQSS 189
BLAST of CMJ_chr8_019180.1 vs. Araport11
Match: AT5G28690.3 (| carboxylate clamp-TPR protein (DUF1685) | Chr5:10723033-10723702 FORWARD LENGTH=192 | 201606) HSP 1 Score: 82.8037 bits (203), Expect = 3.601e-20 Identity = 60/145 (41.38%), Postives = 76/145 (52.41%), Query Frame = 0 Query: 29 REEAW-LRRKGNHQIRRRRSQSV----------TDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSI--------------CSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQ 148
R+ AW RR+ +I+ ++ +SV TDEDL+ELKGSIELGFGF S E KL +TLPAL Y AVN+ + S SS+ CS I+ PGD P+ VK RL+ WAQ VACS+ Q
Sbjct: 49 RDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGSIELGFGF---SEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSSSNGGDGSLSSTSVSSSSIPCSPKTDSDSLKILCPGDNPQQVKQRLRHWAQAVACSLMQ 190
BLAST of CMJ_chr8_019180.1 vs. Araport11
Match: AT5G28690.2 (| carboxylate clamp-TPR protein (DUF1685) | Chr5:10723033-10723702 FORWARD LENGTH=192 | 201606) HSP 1 Score: 82.8037 bits (203), Expect = 3.601e-20 Identity = 60/145 (41.38%), Postives = 76/145 (52.41%), Query Frame = 0 Query: 29 REEAW-LRRKGNHQIRRRRSQSV----------TDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSI--------------CSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQ 148
R+ AW RR+ +I+ ++ +SV TDEDL+ELKGSIELGFGF S E KL +TLPAL Y AVN+ + S SS+ CS I+ PGD P+ VK RL+ WAQ VACS+ Q
Sbjct: 49 RDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGSIELGFGF---SEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSSSNGGDGSLSSTSVSSSSIPCSPKTDSDSLKILCPGDNPQQVKQRLRHWAQAVACSLMQ 190
BLAST of CMJ_chr8_019180.1 vs. Araport11
Match: AT5G28690.1 (| carboxylate clamp-TPR protein (DUF1685) | Chr5:10723033-10723702 FORWARD LENGTH=192 | 201606) HSP 1 Score: 82.8037 bits (203), Expect = 3.601e-20 Identity = 60/145 (41.38%), Postives = 76/145 (52.41%), Query Frame = 0 Query: 29 REEAW-LRRKGNHQIRRRRSQSV----------TDEDLQELKGSIELGFGFQADSPELDPKLTDTLPALGFYCAVNKHYNDRLSRCSSSSSI--------------CSDNDSVSCSSIIDPGDGPETVKVRLKQWAQVVACSVRQ 148
R+ AW RR+ +I+ ++ +SV TDEDL+ELKGSIELGFGF S E KL +TLPAL Y AVN+ + S SS+ CS I+ PGD P+ VK RL+ WAQ VACS+ Q
Sbjct: 49 RDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGSIELGFGF---SEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSSSNGGDGSLSSTSVSSSSIPCSPKTDSDSLKILCPGDNPQQVKQRLRHWAQAVACSLMQ 190 The following BLAST results are available for this feature:
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_019180.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_019180.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr8_019180.1_cmj_v1 ID=CMJ_chr8_019180.1_cmj_v1; Name=CMJ_chr8_019180.1; organism=Citrus maxima; type=mRNA; length=465bpback to top protein sequence of CMJ_chr8_019180.1_cmj_v1 >CMJ_chr8_019180.1_cmj_v1 ID=CMJ_chr8_019180.1_cmj_v1; Name=CMJ_chr8_019180.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=155bpback to top mRNA from alignment at chr8:31225235..31226246- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1012bp; location=Sequence derived from: chr8:31225235..31226246- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr8:31225235..31226246- >CMJ_chr8_019180.1_cmj_v1 ID=CMJ_chr8_019180.1_cmj_v1; Name=CMJ_chr8_019180.1; organism=Citrus maxima; type=CDS; length=465bp; location=Sequence derived from: chr8:31225235..31226246- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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