CMJ_chr3_011700.3
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Match: A0A2H5PPA4|A0A2H5PPA4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_154820 PE=4 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 8.033e-91 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 1 MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPKRQGGLPAADTRETDINADSYDQG 133
MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPKRQGGLPAADTRETDINADSYDQG
Sbjct: 1 MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPKRQGGLPAADTRETDINADSYDQG 133
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Match: V4SZJ1|V4SZJ1_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002536mg PE=4 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 2.485e-90 Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 1 MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPKRQGGLPAADTRETDINADSYDQG 133
MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMP+RQGGLPAADTRETDINADSYDQG
Sbjct: 1 MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPRRQGGLPAADTRETDINADSYDQG 133
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Match: A0A067DE25|A0A067DE25_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028991mg PE=4 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 9.679e-90 Identity = 131/133 (98.50%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 1 MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPKRQGGLPAADTRETDINADSYDQG 133
MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMP+RQGGLPAADTRETDINA+SYDQG
Sbjct: 1 MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPRRQGGLPAADTRETDINANSYDQG 133
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Match: V4SF52|V4SF52_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002536mg PE=4 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 7.745e-87 Identity = 131/142 (92.25%), Postives = 132/142 (92.96%), Query Frame = 0 Query: 1 MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPIL---------TNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPKRQGGLPAADTRETDINADSYDQG 133
MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPI TNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMP+RQGGLPAADTRETDINADSYDQG
Sbjct: 1 MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPIFNLVLQCIYRTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPRRQGGLPAADTRETDINADSYDQG 142
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Match: A0A067DQ03|A0A067DQ03_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028991mg PE=4 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 2.475e-86 Identity = 130/142 (91.55%), Postives = 132/142 (92.96%), Query Frame = 0 Query: 1 MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPIL---------TNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPKRQGGLPAADTRETDINADSYDQG 133
MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPI TNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMP+RQGGLPAADTRETDINA+SYDQG
Sbjct: 1 MANKQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQEQQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPIFNLVLQCIYRTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPRRQGGLPAADTRETDINANSYDQG 142
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Match: A0A5D2U252|A0A5D2U252_GOSMU (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D08G257200v1 PE=4 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 6.741e-42 Identity = 77/134 (57.46%), Postives = 96/134 (71.64%), Query Frame = 0 Query: 4 KQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQE-QQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPKRQGGLPAADTRETDINADSYDQGTTL 136
KQ L+ DAW+REA+EA KLVE+I+ RV NK+ Q + DI ARSKLL+VG+K+DRLESLLRNPPSKPILTNED++ RWKMLSD+QLR KALA+RLYA+ P R G + + + Y QG +L
Sbjct: 3 KQALMADAWIREAEEALKLVEDIENRVNNKNPSLQHHGNCVIDIAARSKLLDVGIKIDRLESLLRNPPSKPILTNEDIDYRWKMLSDMQLRTKALALRLYAL--PTSSRPGNSTHGNHNDMNKIITDYIQGRSL 134
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Match: A0A6J1A8X1|A0A6J1A8X1_9ROSI (uncharacterized protein LOC110415866 isoform X2 OS=Herrania umbratica OX=108875 GN=LOC110415866 PE=4 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.537e-42 Identity = 78/133 (58.65%), Postives = 97/133 (72.93%), Query Frame = 0 Query: 4 KQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQE-QQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPKRQGGLPAADTRETDINADSYDQGTT 135
KQ L+ DAW+REAQEA KLVE+I+ RVKNK+ + Q++ DI ARSKLLE G+KLDRLESLLRNPPSKPILTNEDL+ RW MLS++QLR KALA+ LYA+ P R G L + + + N + +Q T
Sbjct: 3 KQALMGDAWIREAQEASKLVEDIETRVKNKNPSLKHQENRLVDITARSKLLEAGIKLDRLESLLRNPPSKPILTNEDLDYRWNMLSEMQLRTKALALSLYAL--PTSSRPGCLTPGNAKAINTNVNDCEQDQT 133
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Match: A0A061F374|A0A061F374_THECC (Syntaxin of plants 52, putative isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_026395 PE=4 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.066e-41 Identity = 79/133 (59.40%), Postives = 96/133 (72.18%), Query Frame = 0 Query: 4 KQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQE-QQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMPYPMPKRQGGLPAADTRETDINADSYDQGTT 135
KQ L+ DAW+REAQEA KLVE+I+ RVKNK+ + Q++ DI ARSKLLE G+KLDRLESLLRNPPSKPILTNEDL+ RWKMLS++QLR KALA+ LYA+ P R G L + + N +Q T
Sbjct: 3 KQALMGDAWIREAQEASKLVEDIETRVKNKNPSLKHQENRLVDITARSKLLEAGIKLDRLESLLRNPPSKPILTNEDLDYRWKMLSELQLRTKALALSLYAL--PTSSRPGCLTPENAEAINTNVSDCEQDQT 133
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Match: A0A7J9L5Y6|A0A7J9L5Y6_GOSSC (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_022175 PE=4 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.773e-41 Identity = 71/103 (68.93%), Postives = 86/103 (83.50%), Query Frame = 0 Query: 4 KQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQE-QQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMP 105
KQ L+ DAW+REA+EA KLVE+I+ RV NK+ Q + DI ARSKLL+VG+K+DRLESLLRNPPSKPILTNED++ RWKMLSD+QLR KALA+RLYA+P
Sbjct: 3 KQALMADAWIREAEEASKLVEDIENRVNNKNPSLQHHGNCVIDIAARSKLLDVGIKIDRLESLLRNPPSKPILTNEDIDYRWKMLSDMQLRTKALALRLYALP 105
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Match: A0A1U8IQC5|A0A1U8IQC5_GOSHI (uncharacterized protein LOC107899148 OS=Gossypium hirsutum OX=3635 GN=LOC107899148 PE=4 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.001e-40 Identity = 71/103 (68.93%), Postives = 86/103 (83.50%), Query Frame = 0 Query: 4 KQYLVVDAWLREAQEAEKLVEEIDGRVKNKSQE-QQQQSLSDDIIARSKLLEVGVKLDRLESLLRNPPSKPILTNEDLESRWKMLSDIQLRMKALAVRLYAMP 105
KQ L+ DAW+REA+EA KLVE+I+ RV NK+ Q + DI ARSKLL+VG+K+DRLESLLRNPPSKPILTNED++ RWKMLSD+QLR KALA+RLYA+P
Sbjct: 3 KQALMADAWIREAEEALKLVEDIENRVNNKNPSLQHHGNCVIDIAARSKLLDVGIKIDRLESLLRNPPSKPILTNEDIDYRWKMLSDMQLRTKALALRLYALP 105 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_011700.3 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_011700.3_cmj_v1 ID=CMJ_chr3_011700.3_cmj_v1; Name=CMJ_chr3_011700.3; organism=Citrus maxima; type=mRNA; length=411bpback to top protein sequence of CMJ_chr3_011700.3_cmj_v1 >CMJ_chr3_011700.3_cmj_v1 ID=CMJ_chr3_011700.3_cmj_v1; Name=CMJ_chr3_011700.3_cmj_v1; organism=Citrus maxima; type=polypeptide; length=137bpback to top mRNA from alignment at chr3:29838512..29842433- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3922bp; location=Sequence derived from: chr3:29838512..29842433- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:29838512..29842433- >CMJ_chr3_011700.3_cmj_v1 ID=CMJ_chr3_011700.3_cmj_v1; Name=CMJ_chr3_011700.3; organism=Citrus maxima; type=CDS; length=411bp; location=Sequence derived from: chr3:29838512..29842433- (Citrus maximaback to top |