EVM_prediction_HIC_ASM_0.2627

Sequences
The following sequences are available for this feature:

mRNA sequence

>evm.model.HIC_ASM_0.2627-csg_v1 ID=evm.model.HIC_ASM_0.2627-csg_v1; Name=EVM_prediction_HIC_ASM_0.2627; organism=Citrus sinensis; type=mRNA; length=1623bp
ATGAATCGAAAGCTTTGTTTTACCCTTTTCACACTTTCTGTCTTAGTCCT
GTGTGCTGGTTTAGCTCTGGCTACAAAAGACCCAGAGCTAAAACAGTGCA
AGCATCAGTGCAGAGCCCGACAACAATACGACGAGAAGCAGAAGGAGCAA
TGCGCAAGGACGTGTGAAGAGTACTACAAAGAGAAGGAACAACGAGAAAG
GCATCGAGAGGGAGAGAGTGAAGAAGAAAAAGAATGGGGCGGCCGCCACG
AGTGGATGAACCCTGGTGAGCCTGCAGAAAAGCATCTGAGGCAGTGCCAG
AGGGAATGCGATCGGCAAGAGGAGGGAGGACAACAGAGAGCGCTGTGTCG
GTTTAGGTGTCAGGAGAAATATAGAAGAGAGAAAGAGGGAGAAGGAGGAC
AACATAACACGCAAGAGGAAGAGGAAGAGGAAGAGGGAGATGAGGAGAGT
AGTAGAGTTACCAGCCAACATGGAAGAGTTGCTTTTCTTCCCAAGTTCAC
TCAAAGATCAAAGCTTCTTCGTGGCCTTGAGAAGTACCGCCTTGGCATTC
TTATTGCTAATCCTCAAACATTTGTAACTCCAACCCACTTGGATGCTGAT
GCCGTTTTCTTTGTTTCTTGGGGACAAGGAACTATCACTGTGATCCGTGA
GAATAACAGAGAGAGCTACAATGTTAAACGTGGAGATATCATAAGGGTTC
CTTCTGGTAATACTTTCTATGTCACCAATACAGATGATGATGAAAAACTT
TACATCGTCAAATTTATTAAATCCATCAATCTTCCTGGCCAGTACGAGGC
ATTCTATGGGGCGGGTGGTGAAAATCCTGAATCTTTCTTGAGGGCTTTCA
GTTGGGAGATACTTGAATCCGCTTTTAAGACGAAAAGGGACAGCCTGGAG
AGAGTATTATTCCAACAGGACCAAGGAGCCATGGTGAAAGCCAGCAAGCA
ACAGATTCGAGCTCTGAGCCGAAGTCAGGAAGGGCCCAGCATTTGGCCAT
TTGCGGGGGAATCAAGGGGCACATTCAATCTTTTCGGAAAGCGCCCTTCT
CATTCAAACAACTTCGGGGAGCTCTTTGAAGCCGATTCCAACGACTTTAG
GCCACTTGAAGACCTGGACATCACGGTCTCCTACGCCAACATCTCCAAGG
GAGCAATGGCTGCTCCGTTCTACAACTCAAGGTCAACAAAGGCGGCGGTG
GTGGTTGCAGGAGACGGGTACATTGAGATCGCATGCCCACACGTATCCAG
GTCATCAAGTGAACGCCGACATCAAGGCAGCAGCACAAGAGAAGAGGGCA
GCGCCACGTACCACAAAGTAAGCTCCCGGATAAGGACCGATTCAGCGTAC
ATCGTCCCGGCAGGTCATCCTGTTGTCACAGTCGCATCACAAAACAATAA
TCTTGAAGTTGTCTGCTTCGAAATCAATGCGGAGGGCAACATCAGGTTCC
CTCTTGCGGGGAGAAATAAGATATTCAAGGTTATGGAGAGCGAAGCTAAA
GAATTGGCTTTTAACACCAGGGCCGATGAAGTGGAACGCGTGTTCGGAAA
CCAAGATCAAGATTGGTTCTTCAAGGGACCAAGTAGATGGCATCAACAAC
AGCAAGGCCGGGCTTACGAATGA
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protein sequence of evm.model.HIC_ASM_0.2627-csg_v1

>evm.model.HIC_ASM_0.2627-csg_v1 ID=evm.model.HIC_ASM_0.2627-csg_v1; Name=evm.model.HIC_ASM_0.2627-csg_v1; organism=Citrus sinensis; type=polypeptide; length=541bp
MNRKLCFTLFTLSVLVLCAGLALATKDPELKQCKHQCRARQQYDEKQKEQ
CARTCEEYYKEKEQRERHREGESEEEKEWGGRHEWMNPGEPAEKHLRQCQ
RECDRQEEGGQQRALCRFRCQEKYRREKEGEGGQHNTQEEEEEEEGDEES
SRVTSQHGRVAFLPKFTQRSKLLRGLEKYRLGILIANPQTFVTPTHLDAD
AVFFVSWGQGTITVIRENNRESYNVKRGDIIRVPSGNTFYVTNTDDDEKL
YIVKFIKSINLPGQYEAFYGAGGENPESFLRAFSWEILESAFKTKRDSLE
RVLFQQDQGAMVKASKQQIRALSRSQEGPSIWPFAGESRGTFNLFGKRPS
HSNNFGELFEADSNDFRPLEDLDITVSYANISKGAMAAPFYNSRSTKAAV
VVAGDGYIEIACPHVSRSSSERRHQGSSTREEGSATYHKVSSRIRTDSAY
IVPAGHPVVTVASQNNNLEVVCFEINAEGNIRFPLAGRNKIFKVMESEAK
ELAFNTRADEVERVFGNQDQDWFFKGPSRWHQQQQGRAYE*
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mRNA from alignment at HIC_ASM_0:24577241..24579237+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
> ID=; Name=; organism= ; type=; length=1997bp; location=Sequence derived from: HIC_ASM_0:24577241..24579237+ (Citrus sinensis
ATGAATCGAAAGCTTTGTTTTACCCTTTTCACACTTTCTGTCTTAGTCCT GTGTGCTGGTTTAGCTCTGGCTACAAAAGACCCAGAGCTAAAACAGTGCA AGCATCAGTGCAGAGCCCGACAACAATACGACGAGAAGCAGAAGGAGCAA TGCGCAAGGACGTGTGAAGAGTACTACAAAGAGAAGGAACAACGAGAAAG GCATCGAGAGGGAGAGAGTGAAGAAGAAAAAGAATGGGGCGGCCGCCACG AGTGGATGAACCCTGGTGAGCCTGCAGAAAAGCATCTGAGGCAGTGCCAG AGGGAATGCGATCGGCAAGAGGAGGGAGGACAACAGAGAGCGCTGTGTCG GTTTAGGTGTCAGGAGAAATATAGAAGAGAGAAAGAGGGAGAAGGAGGAC AACATAACACGCAAGAGGAAGAGGAAGAGGAAGAGGGAGATGAGGAGAGG TAGTGGCAAGGGCATGAAGAAGAAGAAGAAGAAGAAGATGAGAATCCATA TGTCTTTCATAAACATCACTTCAGTAGTAGAGTTACCAGCCAACATGGAA GAGTTGCTTTTCTTCCCAAGTTCACTCAAAGATCAAAGCTTCTTCGTGGC CTTGAGAAGTACCGCCTTGGCATTCTTATTGCTAATCCTCAAACATTTGT AACTCCAACCCACTTGGATGCTGATGCCGTTTTCTTTGTTTCTTGGGGTA ATTTTTCTTGTTTCCACTATCTTTTTTATTGTTTACGTACTTGGGGGATG AGATGAATATATGATTTACGTTATGTTTCGTCGACTCTTTGGCTTTTTTG TAGGACAAGGAACTATCACTGTGATCCGTGAGAATAACAGAGAGAGCTAC AATGTTAAACGTGGAGATATCATAAGGGTTCCTTCTGGTAATACTTTCTA TGTCACCAATACAGATGATGATGAAAAACTTTACATCGTCAAATTTATTA AATCCATCAATCTTCCTGGCCAGTACGAGGTATATTATATCTTTGCTCTG TTCCCTTCCTTCCTAGTTTTTAGCATCTACATAATTGATCATAGTGGGAT TTTTCATTGGCTCCTCCGAACTTTTCTCTGATGCAGGCATTCTATGGGGC GGGTGGTGAAAATCCTGAATCTTTCTTGAGGGCTTTCAGTTGGGAGATAC TTGAATCCGCTTTTAAGGTAATTAATTTCTTAGTAATAAAATTAAGTTGT AACATATGCTTTTTTTTTTAATCTAATTGATGTGCATTAATTTTCCTTCC CAGACGAAAAGGGACAGCCTGGAGAGAGTATTATTCCAACAGGACCAAGG AGCCATGGTGAAAGCCAGCAAGCAACAGATTCGAGCTCTGAGCCGAAGTC AGGAAGGGCCCAGCATTTGGCCATTTGCGGGGGAATCAAGGGGCACATTC AATCTTTTCGGAAAGCGCCCTTCTCATTCAAACAACTTCGGGGAGCTCTT TGAAGCCGATTCCAACGACTTTAGGCCACTTGAAGACCTGGACATCACGG TCTCCTACGCCAACATCTCCAAGGGAGCAATGGCTGCTCCGTTCTACAAC TCAAGGTCAACAAAGGCGGCGGTGGTGGTTGCAGGAGACGGGTACATTGA GATCGCATGCCCACACGTATCCAGGTCATCAAGTGAACGCCGACATCAAG GCAGCAGCACAAGAGAAGAGGGCAGCGCCACGTACCACAAAGTAAGCTCC CGGATAAGGACCGATTCAGCGTACATCGTCCCGGCAGGTCATCCTGTTGT CACAGTCGCATCACAAAACAATAATCTTGAAGTTGTCTGCTTCGAAATCA ATGCGGAGGGCAACATCAGGTTCCCTCTTGCGGGGAGAAATAAGATATTC AAGGTTATGGAGAGCGAAGCTAAAGAATTGGCTTTTAACACCAGGGCCGA TGAAGTGGAACGCGTGTTCGGAAACCAAGATCAAGATTGGTTCTTCAAGG GACCAAGTAGATGGCATCAACAACAGCAAGGCCGGGCTTACGAATGA
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Coding sequence (CDS) from alignment at HIC_ASM_0:24577241..24579237+

>evm.model.HIC_ASM_0.2627-csg_v1 ID=evm.model.HIC_ASM_0.2627-csg_v1; Name=EVM_prediction_HIC_ASM_0.2627; organism=Citrus sinensis; type=CDS; length=1623bp; location=Sequence derived from: HIC_ASM_0:24577241..24579237+ (Citrus sinensis
ATGAATCGAAAGCTTTGTTTTACCCTTTTCACACTTTCTGTCTTAGTCCT
GTGTGCTGGTTTAGCTCTGGCTACAAAAGACCCAGAGCTAAAACAGTGCA
AGCATCAGTGCAGAGCCCGACAACAATACGACGAGAAGCAGAAGGAGCAA
TGCGCAAGGACGTGTGAAGAGTACTACAAAGAGAAGGAACAACGAGAAAG
GCATCGAGAGGGAGAGAGTGAAGAAGAAAAAGAATGGGGCGGCCGCCACG
AGTGGATGAACCCTGGTGAGCCTGCAGAAAAGCATCTGAGGCAGTGCCAG
AGGGAATGCGATCGGCAAGAGGAGGGAGGACAACAGAGAGCGCTGTGTCG
GTTTAGGTGTCAGGAGAAATATAGAAGAGAGAAAGAGGGAGAAGGAGGAC
AACATAACACGCAAGAGGAAGAGGAAGAGGAAGAGGGAGATGAGGAGAGT
AGTAGAGTTACCAGCCAACATGGAAGAGTTGCTTTTCTTCCCAAGTTCAC
TCAAAGATCAAAGCTTCTTCGTGGCCTTGAGAAGTACCGCCTTGGCATTC
TTATTGCTAATCCTCAAACATTTGTAACTCCAACCCACTTGGATGCTGAT
GCCGTTTTCTTTGTTTCTTGGGGACAAGGAACTATCACTGTGATCCGTGA
GAATAACAGAGAGAGCTACAATGTTAAACGTGGAGATATCATAAGGGTTC
CTTCTGGTAATACTTTCTATGTCACCAATACAGATGATGATGAAAAACTT
TACATCGTCAAATTTATTAAATCCATCAATCTTCCTGGCCAGTACGAGGC
ATTCTATGGGGCGGGTGGTGAAAATCCTGAATCTTTCTTGAGGGCTTTCA
GTTGGGAGATACTTGAATCCGCTTTTAAGACGAAAAGGGACAGCCTGGAG
AGAGTATTATTCCAACAGGACCAAGGAGCCATGGTGAAAGCCAGCAAGCA
ACAGATTCGAGCTCTGAGCCGAAGTCAGGAAGGGCCCAGCATTTGGCCAT
TTGCGGGGGAATCAAGGGGCACATTCAATCTTTTCGGAAAGCGCCCTTCT
CATTCAAACAACTTCGGGGAGCTCTTTGAAGCCGATTCCAACGACTTTAG
GCCACTTGAAGACCTGGACATCACGGTCTCCTACGCCAACATCTCCAAGG
GAGCAATGGCTGCTCCGTTCTACAACTCAAGGTCAACAAAGGCGGCGGTG
GTGGTTGCAGGAGACGGGTACATTGAGATCGCATGCCCACACGTATCCAG
GTCATCAAGTGAACGCCGACATCAAGGCAGCAGCACAAGAGAAGAGGGCA
GCGCCACGTACCACAAAGTAAGCTCCCGGATAAGGACCGATTCAGCGTAC
ATCGTCCCGGCAGGTCATCCTGTTGTCACAGTCGCATCACAAAACAATAA
TCTTGAAGTTGTCTGCTTCGAAATCAATGCGGAGGGCAACATCAGGTTCC
CTCTTGCGGGGAGAAATAAGATATTCAAGGTTATGGAGAGCGAAGCTAAA
GAATTGGCTTTTAACACCAGGGCCGATGAAGTGGAACGCGTGTTCGGAAA
CCAAGATCAAGATTGGTTCTTCAAGGGACCAAGTAGATGGCATCAACAAC
AGCAAGGCCGGGCTTACGAATGA
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