Citrus clementina

Overview
GenusCitrus
Speciesclementina
Common NameClementine
AbbreviationC. clementina
PloidyDiploid
Chromosome Number2n=2x=18
Genome Size370 Mb
Available Markers1728
Available Maps3
Available QTLs341 (Citrus spp.)
Available MTLs0
Available Traits145 (Citrus spp.)
Available Genomes1
Germplasm
NameType
Citrus-Clementine-Ref-F1population
Clemenrubicultivar
Clementinebreeding_research_material
Clementine de Corsecultivar
Clementine Monrealcultivar
Clemenulescultivar
Comunebreeding_research_material
Fortunecultivar
Hernandinacultivar
Monrealcultivar
Nulescultivar
Tardivobreeding_research_material

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KEGG Report
Transcripts

Below is a list of transcript assemblies that are available for Citrus clementina. Click the assembly name for further details.

 
Assembly Name Analysis Name Date Constructed Stats
Citrus clementina Unigene v1 Citrus clementia unigene v1 (Ccv1) 2010-06-22 Reads: 117,758
Contigs: 15,548
Genomes

Current genome assembly

Previous assembly

Publications
Publications: 
  • Aleza P et al., "Recovery and characterization of a Citrus clementina Hort. ex Tan. 'Clemenules' haploid plant selected to establish the reference whole Citrus genome sequence.", BMC Plant Biol., 2009 Aug 22;9:110
  • Terol J et al., "Development of genomic resources for Citrus clementina: characterization of three deep-coverage BAC libraries and analysis of 46,000 BAC end sequences.", BMC Genomics, 2008 Sep 18;9:423
  • Rios G et al., "Characterization of hemizygous deletions in citrus using array-comparative genomic hybridization and microsynteny comparisons with the poplar genome.", BMC Genomics, 2008 Aug 9;9:381