Fortunella hindsii S3y-45 genome v2.0

Overview
Analysis NameFortunella hindsii S3y-45 genome v2.0
MethodPacBio, Illumina, Hi-C (Assembly with Canu, Smartdenovo)
SourceHuazhong Agriculture University
Date performed2023-05-10

 

About the assembly

For this genome, please cite Wang et al, Structural variation and parallel evolution of apomixis in citrus during domestication and diversification.  This data was downloaded from the Citrus Pan-Genome to Breeding Database website.  The manuscript identifies accession S3y-45 as the sample that was sequenced and this is an improved version of the previous assembly.

Assembly metrics

Assembly size 324 Mb
Number of scaffolds 10
N50 32,266,151 bp
Predicted transcripts 32,563
Annotated genes 32,563
Assembly BUSCO score (embryophyta_odb10) 98.9%
Annotation BUSCO score (embryophyta_odb10) 97.7%