Cic285280.3 | Citrus Genome Database

Transcript Overview


Name	Cic285280.3
Unique Name	Cic285280.3-ZGYCC_v2
Type	mRNA
Organism	Citrus ichangensis (Papeda)
Sequence length	603

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus ichangensis cv. ZGYCC v2.0 genome	2023-12-21
InterProScan Analysis for Citrus ichangensis cv. ZGYCC v2.0 proteins	2024-01-31
Blastp of Citrus ichangensis cv. ZGYCC v2.0 proteins vs UniProt TrEMBL	2024-01-31
Blastp of Citrus ichangensis cv. ZGYCC v2.0 proteins vs UniProt Swissprot	2024-01-31
Blastp of Citrus ichangensis cv. ZGYCC v2.0 proteins vs Araport11	2024-01-31

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
abhcizL078	Atalantia buxifolia cv. HKC v2.0 genome	Atalantia buxifolia
ccrcizL054	Citrus australasica CRC3672 genome v1	Citrus australasica
cizcleR269	Citrus limon cv. Eureka genome v1.0	Citrus limon
cizcleR274	Citrus limon cv. Eureka genome v1.0	Citrus limon
ccrcizL426	Citrus australasica CRC3672 genome v1	Citrus australasica
cizcllR182	Citrus linwuensis cv. LW genome v1.0	Citrus linwuensis
cizcmjR186	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
cizcmR175	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
cizcmxR202	Citrus maxima cv. XGF genome v1.0	Citrus maxima
caucizL061	Citrus australis genome v1.0 (UQ)	Citrus australis
cizcsR230	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
cizdvaR116	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
cizdvbR113	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
cizswoR157	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
cizfhsR183	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Cic285280	Cic285280-ZGYCC_v2	Citrus ichangensis	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cic285280.3.utr5.1	Cic285280.3.utr5.1-ZGYCC_v2	Citrus ichangensis	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cic285280.3.exon1	Cic285280.3.exon1-ZGYCC_v2	Citrus ichangensis	exon
Cic285280.3.exon2	Cic285280.3.exon2-ZGYCC_v2	Citrus ichangensis	exon
Cic285280.3.exon3	Cic285280.3.exon3-ZGYCC_v2	Citrus ichangensis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cic285280.3.cds.1	Cic285280.3.cds.1-ZGYCC_v2	Citrus ichangensis	CDS
Cic285280.3.cds.2	Cic285280.3.cds.2-ZGYCC_v2	Citrus ichangensis	CDS
Cic285280.3.cds.3	Cic285280.3.cds.3-ZGYCC_v2	Citrus ichangensis	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cic285280.3.utr3.1	Cic285280.3.utr3.1-ZGYCC_v2	Citrus ichangensis	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Cic285280.3-ZGYCC_v2	Cic285280.3-ZGYCC_v2	Citrus ichangensis	polypeptide
Cic285280.3-ZGYCC_v2	Cic285280.3-ZGYCC_v2-protein	Citrus ichangensis	polypeptide

Homology

[Close]

BLAST of Cic285280.3 vs. ExPASy TrEMBL
Match: A0A067GEU7|A0A067GEU7_CITSI (C2H2-type domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027549mg PE=4 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 7.038e-97
Identity = 141/144 (97.92%), Postives = 141/144 (97.92%), Query Frame = 0

Query:   25 MANLPSAADGENLEKGTSAFSCIYCRKSFANHRSLRGHLRSHNVQLKAAWRRNCPSNSCASIGFASTIVDPLFSNQPGNSCEVVGNNLAFHKRSSSNLTFSMNATFAGSGSTPSAGFPLDVSLSLGLNGVQKLRNDEIQTCQDG 168
            MANLPSAADGENLEKGTSAFSCIYCRKSFANHRSLRGHLRSHNVQLKAAWRRNCPSNSCASIG ASTIVDPL SNQPGNSCEVVGNNLAFHKRSS NLTFSMNATFAGSGSTPSAGFPLDVSLSLGLNGVQKLRNDEIQTCQDG
Sbjct:    1 MANLPSAADGENLEKGTSAFSCIYCRKSFANHRSLRGHLRSHNVQLKAAWRRNCPSNSCASIGSASTIVDPLSSNQPGNSCEVVGNNLAFHKRSSPNLTFSMNATFAGSGSTPSAGFPLDVSLSLGLNGVQKLRNDEIQTCQDG 144

[Close]

BLAST of Cic285280.3 vs. ExPASy TrEMBL
Match: A0A2H5N4K4|A0A2H5N4K4_CITUN (C2H2-type domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_014670 PE=4 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.125e-95
Identity = 139/144 (96.53%), Postives = 139/144 (96.53%), Query Frame = 0

Query:   25 MANLPSAADGENLEKGTSAFSCIYCRKSFANHRSLRGHLRSHNVQLKAAWRRNCPSNSCASIGFASTIVDPLFSNQPGNSCEVVGNNLAFHKRSSSNLTFSMNATFAGSGSTPSAGFPLDVSLSLGLNGVQKLRNDEIQTCQDG 168
            MANLPS ADGENLE GTSAFSCIYCRKSFANHRSLRGHLRSHNVQLKAAWRRNCPSNSCASIG ASTIVDPL SNQPGNSCEVVGNNLAFHKRSSSNLTFSMNATFAG GSTPSAGFPLDVSLSLGLNGVQKLRNDEIQTCQDG
Sbjct:    1 MANLPSTADGENLENGTSAFSCIYCRKSFANHRSLRGHLRSHNVQLKAAWRRNCPSNSCASIGSASTIVDPLSSNQPGNSCEVVGNNLAFHKRSSSNLTFSMNATFAGFGSTPSAGFPLDVSLSLGLNGVQKLRNDEIQTCQDG 144

[Close]

BLAST of Cic285280.3 vs. ExPASy TrEMBL
Match: A0A5N6QCV8|A0A5N6QCV8_9ROSI (C2H2-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_000935 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.842e-12
Identity = 57/188 (30.32%), Postives = 82/188 (43.62%), Query Frame = 0

Query:   31 AADGENLEKGTSAFSCIYCRKSFANHRSLRGHLRSHNVQLKAAWRRNCPSNSCASIGFASTIVDPLFSNQPGNSCEVVGNNLA-FHKRSSSNLTFSM--------------------NAT----------------------------FAGSGSTPSAGFPLDVSLSLGLNGVQKLRNDEIQTCQDGK 169
            A++ EN EKG    SC YC+K F NH +L GHLR+H  ++ A    N P +S   +  +ST  +P+   QP NS     NN +    R++S++ FS                     NAT                            F  S S+ + GFP+D SL  G  G+ +   DE++T +DGK
Sbjct:    6 ASNKENAEKGMEIHSCFYCKKVFNNHLALGGHLRAHQEEINARRSWNYPVHSSNFLDVSSTAPNPILMGQPENSSGGARNNPSVLFSRATSSMDFSKFCLNESSCVNARKYFENNVGNATSQFFMSPNLSSSSGCAEVHHSNPLTSSLFLPSASSATTGFPMDSSLYSGPYGICQFNTDELRTFRDGK 193

[Close]

BLAST of Cic285280.3 vs. ExPASy TrEMBL
Match: A0A8J4QND3|A0A8J4QND3_9ROSI (C2H2-type domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_024291 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 6.304e-7
Identity = 55/193 (28.50%), Postives = 78/193 (40.41%), Query Frame = 0

Query:   28 LPSAADGENLEKGTSAFSCIYCRKSFANHRSLRGHLRSHNVQLKAAWRRNCPSNSCASIGFASTIVDPLFSNQPGNSC-----------EVVGNNLAF----------------------HKRS----SSNLTF------------SMNATFAGSGSTPSAGFPLDVSLSLGLNGVQKLRNDEIQTCQDGKSF 171
            LPS  D EN EK     SC YC+  F NH++L  HLR H  ++ A    N P +S   I   S+ ++P+  +QP +S              V +NL F                      + RS    S NL++            S +  F  S S  + GFP+  S     NG  +   DE++T +DG  F
Sbjct:    5 LPS--DKENAEKHVGLLSCFYCKMVFNNHQALGAHLRVHQEEINAWKSWNYPVHSSTFIDGTSSALNPISMSQPDHSSGGAWSNPSTLFSGVTSNLDFSNFCSNESSWVNASNYSQNNVGYARSQYIMSPNLSYGSASARFHPSAPSSSTVFISSASPATTGFPMGPSSYFNSNGACQFNTDELRTFRDGMPF 195

[Close]

BLAST of Cic285280.3 vs. ExPASy TrEMBL
Match: A0A6A6LWR5|A0A6A6LWR5_HEVBR (C2H2-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_005260 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 8.753e-7
Identity = 60/208 (28.85%), Postives = 77/208 (37.02%), Query Frame = 0

Query:   30 SAADGENLEKGTSAFSCIYCRKSFANHRSLRGHLRSHNVQLKAAWRRNCPSNSCASIGFASTIVDPLFSNQP----------------------------------GNSCEVVGNNLA---FHKRSSSNLT-------------FSMNATFAGSGSTPSA---------GFPLDVSLSLGLNGVQKLRNDEIQTCQDGKSFFYGGVLQ 178
            S    EN +K     SC YC+K F+NH++L GHLR H  ++K+  R N    S  SI    T V+PL + QP                                   N+ +  GNNLA    H   S NL+             F M A       TPS+         GFP D S   G + V     DE +T +D   F     LQ
Sbjct:    5 SVTGKENAKKHVDIHSCFYCKKVFSNHQALGGHLRVHQGEIKSRKRWNSSGVSSNSIDITGTHVNPLTNLQPETSSGEARKILPFFNWEASPFGFYKRCYLHENSLANTSKFFGNNLANGESHLIMSPNLSSTSGSAEIHQPSCFIMTAITPFRNGTPSSNTFASPVAIGFPSDPSFCSGNSEVCHFNFDECRTWRDAIPFISENALQ 212

The following BLAST results are available for this feature:

BLAST of Cic285280.3 vs. ExPASy TrEMBL
BLAST of Cic285280.3 vs. ExPASy TrEMBL
BLAST of Cic285280.3 vs. ExPASy TrEMBL

BLAST of Cic285280.3 vs. ExPASy TrEMBL
Analysis Date: 2024-01-31 (Blastp of Citrus ichangensis cv. ZGYCC v2.0 proteins vs UniProt TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A067GEU7\|A0A067GEU7_CITSI	7.038e-97	97.92	C2H2-type domain-containing protein OS=Citrus sine...	[more]
A0A2H5N4K4\|A0A2H5N4K4_CITUN	3.125e-95	96.53	C2H2-type domain-containing protein OS=Citrus unsh...	[more]
A0A5N6QCV8\|A0A5N6QCV8_9ROSI	2.842e-12	30.32	C2H2-type domain-containing protein OS=Carpinus fa...	[more]
A0A8J4QND3\|A0A8J4QND3_9ROSI	6.304e-7	28.50	C2H2-type domain-containing protein OS=Castanea mo...	[more]
A0A6A6LWR5\|A0A6A6LWR5_HEVBR	8.753e-7	28.85	C2H2-type domain-containing protein OS=Hevea brasi...	[more]

BLAST of Cic285280.3 vs. ExPASy TrEMBL
Analysis Date: 2024-01-31 (Blastp of Citrus ichangensis cv. ZGYCC v2.0 proteins vs UniProt Swissprot)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Cic285280.3 vs. ExPASy TrEMBL
Analysis Date: 2024-01-31 (Blastp of Citrus ichangensis cv. ZGYCC v2.0 proteins vs Araport11)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterProScan Analysis for Citrus ichangensis cv. ZGYCC v2.0 proteins
Date Performed: 2024-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022755	Zinc finger, double-stranded RNA binding	PFAM	PF12171	zf-C2H2_jaz	coord: 44..66 e-value: 0.29 score: 22.6
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 26..85 e-value: 6.6E-6 score: 27.8
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 44..71 score: 10.782589
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 41..67

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at contig452:1160910..1164327+
coding sequence from alignment at contig452:1160910..1164327+

mRNA sequence

>Cic285280.3-ZGYCC_v2 ID=Cic285280.3-ZGYCC_v2; Name=Cic285280.3; organism=Citrus ichangensis; type=mRNA; length=603bp
ATGGTTTCCCTTGCATTTCCTCTTTCTCTTCTCTTCTTGTTGACCCTATT
TTGGGTCTTGTTTACAACTTCAATGGCGAACCTCCCTTCAGCTGCTGACG
GAGAAAACCTAGAAAAGGGCACTAGTGCTTTTTCTTGCATCTATTGCAGA
AAATCATTTGCTAACCATCGCTCTCTTAGAGGTCATCTTAGGTCTCATAA
TGTCCAGTTGAAGGCAGCTTGGAGGAGGAATTGCCCTAGTAATTCTTGTG
CTTCCATTGGCTTTGCTAGCACCATCGTTGATCCCCTGTTCAGCAACCAA
CCTGGCAATTCTTGTGAAGTTGTTGGGAACAATCTAGCTTTCCATAAGAG
GTCCAGCTCAAATTTAACTTTCTCGATGAATGCAACTTTTGCTGGATCTG
GTAGCACTCCGTCCGCTGGTTTCCCTTTGGATGTTTCATTGTCTTTAGGC
TTGAATGGAGTCCAGAAATTGCGTAATGATGAGATCCAAACTTGCCAAGA
TGGTAAGTCGTTCTTCTATGGAGGTGTCTTGCAGAAGTCTCAACCCAACC
TTAATGGTAGGTTTCTTGAATTTTGGACAGGGCGAGAGGATTTACCCAAT
TGA

protein sequence of Cic285280.3-ZGYCC_v2

>Cic285280.3-ZGYCC_v2 ID=Cic285280.3-ZGYCC_v2; Name=Cic285280.3-ZGYCC_v2; organism=Citrus ichangensis; type=polypeptide; length=201bp
MVSLAFPLSLLFLLTLFWVLFTTSMANLPSAADGENLEKGTSAFSCIYCR
KSFANHRSLRGHLRSHNVQLKAAWRRNCPSNSCASIGFASTIVDPLFSNQ
PGNSCEVVGNNLAFHKRSSSNLTFSMNATFAGSGSTPSAGFPLDVSLSLG
LNGVQKLRNDEIQTCQDGKSFFYGGVLQKSQPNLNGRFLEFWTGREDLPN
*

mRNA from alignment at contig452:1160910..1164327+

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=3418bp; location=Sequence derived from: contig452:1160910..1164327+ (Citrus ichangensis
CAAAGTTGAAATAAAAGCAAAAGAAGCTAGTATGAAAATAATAGCCTTAC
CAAATTTTAAATATCTTGTTATATTTGTCAACAATTTGACAGGTGCGTGC
CAAAATTTTTAAATGAAAGATGTAGCTGAAAAATGAAAATAAATAAGACA
ACCGAGCAAAAAGAAGCGGGGAATCACATGACTTAGGAGCTGCCGCCGGT
GACTCTCAGTCGGAGCACGACGAGGACACTTATAGAGGCAATTCTCTCTC
TCACTCTCTCTCTATGTCCATATAATTCTGACATTTTATAACTGCAAATT
TATTATTATGTTGCTTTGAGATAGATCATGTAGTAACAGAAGTATACTTG
TGTTTTCTATTATGGATTAAGTACAGTGCCGTCTAGTTTCGTTTGTGTCG
TATATTTGAACTGATGTCCATTTTTTCCGTAACTTATAATTTCTTAATGC
GTGCAATCGACAGGCAATTAGTGAAACTATTATGATTTTGTTAGTGGCGG
TGAAATTAGTCGATTATCTTTTTAGTGATATTCGTTGCTTCATCTTTCTG
TACTTTGCTTACCATGTCTTCATTATAGATGAAATCAAGCAGCTTCGTCT
TATTTTGAGTTGACTTTGCTTGAAACTTGTAATTAATTGTTAAGGAAAAT
GTGACCAATCATCATTGTTGGTTTATGCCTGAACTATGAATGGAATGGAA
ACGAGAATATTGAAATTGGGAAACTTTTAAGTGAATATTGGCATTTTTGT
TTCCCTGATTTGTTGGGCACAGCCCTAATATCAGCCGTTTTGATTGAGAC
TCTAAATGAGTTACATCTTAATTGATAAAGGTAAAGATAGAACTATATCT
TATTGTTATCAGCTATGGTTTTGCTCTTTGGTTATGTTCCCCTTTTAGCA
TTGAAGTTGTTGTGGTCTAACCATATTTTTCACGTCCATTTTGAAATCGT
AGATTTTTAATAGATTAGGAAAAGAAAGAAAGAAAGAAATGCATGCAAAA
ATTACACTAGTTACGGACAAAAAGGTTTTCGTAAATAATGTTCTTTTTTC
TTTAAATCATAGGTTACTTAACTAGATTGTACTAATTTTGATTCATATAT
TTCTGAGTCAGTATATACATTATCCTGTTCACTTAATTTGTTTATACATC
TTTCTGTGGACCCATTGAAAACTAAGACCATTGCATGGTCAGCTCCTTTA
GTTTATACAACTGCCTAAATTTTCTCGGTTGAACTCTGTCATATCATATT
GTTAGGCATAGTATTTTAATTTTGTCAGCCTACAATCGTGTAAAACTGTG
TATTATATTGGTGACTGGCTGGTTAATATATTAACCCTCCAACTCTCCTA
ATAACGCCACCCGATCAATTTATGGCGATTATGGCTTTGGATAGGGTGCG
CCTGTGGAAAATGATTCGTGTAAACATCTCACAATAGTTTGAGATTACGC
TTTAGTTTAGTTGAATTAGATTAAGTGTGCTAGATTGTTTTGTCTATTAG
AAAGTGATGTCAGGGTAATTATTATGCACTCTCTCATGATTTGGCCGTAT
TTTGGTTGGGGTGCATTATTTATTGAAATTTAGATCTCTGTAGCATTATT
ATTTGATTGTGAAGTGCTGTCCGAAATTTCAAGTCTTTTTCGATACGAAA
TTATAGTTACGCAATTGGCATTGACATTTTTGCCTTTGTTTTGCTTTTGG
CTGCCTGTGGAAAAAATACATGACCGATATTTAGGCAATGTGAGGATCAA
TGATTGTCAGATTTCAAACCTTGTTGAAGAAGCAGATGAGAAAATAAGCA
ACATGCCTTTGTTGTTCTTTCAACCATGCATGCTCATTGCTAAAAATTTT
TTGGGGTTACTACTGTATCCTCCTAGGAGTGCAAACAATTGAGGTCTCAA
CTTTGTTTGGAATTTTCCTATGTCTAATTGTTATGATCGTCATAATAGAG
ATTTCACGACCTACTTCCTTGTGATGTATTCTTTGAATTTCCAAAATTTC
CCAATGATGGATGCCAAAGATTAAGTGACATGTTATTTCGTGGCGTTGTG
ATAGCTAATCATCTTCTTTTACATAGCTCTGACATTTGTTTTTAGAGGTG
CTGGTGCTTTAAGGATAAGGCCAGGTTTAGCTGCCATTGCATATAATTCA
ATGCTAACAATGTCTTTCCATATTTAGTATATGTCTTTCCTCTTCTTAAA
TGATTTTAATTAGGATTGTCATTTTACATTAATTAGTCTAACCGATAAGA
CCTATTTCTCTCTCCTAAAATGTAAAACGGGGAAAAAAGTTGGCATTCTT
CGTCACCGCATGGTTTCCCTTGCATTTCCTCTTTCTCTTCTCTTCTTGTT
GACCCTATTTTGGGTCTTGTTTACAACTTCAATGGCGAACCTCCCTTCAG
CTGCTGACGGAGAAAACCTAGAAAAGGGCACTAGTGCTTTTTCTTGCATC
TATTGCAGAAAATCATTTGCTAACCATCGCTCTCTTAGAGGTCATCTTAG
GTCTCATAATGTCCAGTTGAAGGCAGCTTGGAGGAGGAATTGCCCTAGTA
ATTCTTGTGCTTCCATTGGCTTTGCTAGCACCATCGTTGATCCCCTGTTC
AGCAACCAACCTGGCAATTCTTGTGAAGTTGTTGGGAACAATCTAGCTTT
CCATAAGAGGTCCAGCTCAAATTTAACTTTCTCGATGAATGCAAGTAAGT
TCTCTGAATATAGTTGTAAAATCAGCAATGCTCAAAATGTCTCAAAATCT
TCCTACGACATTCACAGTAATGAACTCAACCTTTCAAATTGTTATTTGTC
AACAGCTTTTGCTGGATCTGGTAGCACTCCGTCCGCTGGTTTCCCTTTGG
ATGTTTCATTGTCTTTAGGCTTGAATGGAGTCCAGAAATTGCGTAATGAT
GAGATCCAAACTTGCCAAGATGGTAAGTCGTTCTTCTATGGAGGTGTCTT
GCAGAAGTCTCAACCCAACCTTAGTAAGCATTTCATTTACTAGCTCTGTT
ATAACTATTCACAGTGGTTGCTTGGTTTAAATCAATCTCCTGGTTTGAAA
CTGACACTTTTTGGTTCCTGTTTCATCAATCTTTATCGGTGTTCAGGCCT
GGCTGACGGTTGTGTGTCCAAGATGGTAGGTTTCTTGAATTTTGGACAGG
GCGAGAGGATTTACCCAATTGATTCCCTTGCAAACACTGATGTGATGAAA
AGATCAAAAAGGGCAAAGATTGTCTCCAGATTGCCTGTGGAAATACAGAA
GCCTCAAATCAAGGAATCATCTCTTGTTAAGACTATGGAGAAACCAGGTC
CTGCATTGCTGATTTCCGTGGATGCTGAACAGGAGGTCCCAGCAGATTTA
GATCTATCTCTACATCTGTAGATTTGTACCATTTTTTTGCAAATAAATTG
ACAATATAATTAGTGGTA

Coding sequence (CDS) from alignment at contig452:1160910..1164327+

>Cic285280.3-ZGYCC_v2 ID=Cic285280.3-ZGYCC_v2; Name=Cic285280.3; organism=Citrus ichangensis; type=CDS; length=603bp; location=Sequence derived from: contig452:1160910..1164327+ (Citrus ichangensis
ATGGTTTCCCTTGCATTTCCTCTTTCTCTTCTCTTCTTGTTGACCCTATT
TTGGGTCTTGTTTACAACTTCAATGGCGAACCTCCCTTCAGCTGCTGACG
GAGAAAACCTAGAAAAGGGCACTAGTGCTTTTTCTTGCATCTATTGCAGA
AAATCATTTGCTAACCATCGCTCTCTTAGAGGTCATCTTAGGTCTCATAA
TGTCCAGTTGAAGGCAGCTTGGAGGAGGAATTGCCCTAGTAATTCTTGTG
CTTCCATTGGCTTTGCTAGCACCATCGTTGATCCCCTGTTCAGCAACCAA
CCTGGCAATTCTTGTGAAGTTGTTGGGAACAATCTAGCTTTCCATAAGAG
GTCCAGCTCAAATTTAACTTTCTCGATGAATGCAACTTTTGCTGGATCTG
GTAGCACTCCGTCCGCTGGTTTCCCTTTGGATGTTTCATTGTCTTTAGGC
TTGAATGGAGTCCAGAAATTGCGTAATGATGAGATCCAAACTTGCCAAGA
TGGTAAGTCGTTCTTCTATGGAGGTGTCTTGCAGAAGTCTCAACCCAACC
TTAATGGTAGGTTTCTTGAATTTTGGACAGGGCGAGAGGATTTACCCAAT
TGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR022755	Znf_C2H2_jaz
IPR013087	Znf_C2H2_type
IPR036236	Znf_C2H2_sf