Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016

Map Overview

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NameCitrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016
SpeciesCitrus spp.
Map typegenetic
Population typeF1
Population size68
Map unitcM
Maternal parentCleopatra
Paternal parentFlyingDragon
Number of loci81
Number of QTL61
Number of linkage groups9
Publication[view all]
ContactMJ Asins
Publication
YearPublications
2016Raga V, Intrigliolo DS, Bernet GP, Carbonell EA, Asins MJ. Genetic analysis of salt tolerance in a progeny derived from the citrus rootstocks Cleopatra mandarin and trifoliate orange. Tree Genetics & Genomes. 2016; 12:34.
Map QTL
This map contains 61 QTL:
Linkage GroupNameTypeStartStopPeak
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4cqCLCONC.Cleopatra/P.trifoliata.LG4C.LeafQTL--20.53 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qCOIN.Cleopatra/P.trifoliata.LG3QTL--5 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4bqDEFOL.Cleopatra/P.trifoliata.LG4bQTL--58.88 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qDEFOL.Cleopatra/P.trifoliata.LG3QTL--88.51 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7qLFWT.Cleopatra/P.trifoliata.LG7.1QTL--125.54 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qLFWT.Cleopatra/P.trifoliata.LG3.1QTL--91.57 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7qLFWT.Cleopatra/P.trifoliata.LG7.2QTL--100.29 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qLFWT.Cleopatra/P.trifoliata.LG3.2QTL--89.57 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qLFWT.Cleopatra/P.trifoliata.LG3.3QTL--90.57 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qFLFWT.Cleopatra/P.trifoliata.LG3.1QTL--83.29 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7qFLFWT.Cleopatra/P.trifoliata.LG7QTL--71.4 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qFLFWT.Cleopatra/P.trifoliata.LG3.2QTL--90.57 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qFLFWT.Cleopatra/P.trifoliata.LG3.3QTL--89.57 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qFLFWT.Cleopatra/P.trifoliata.LG3.4QTL--89.51 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qPLHGT.Cleopatra/P.trifoliata.LG3QTL--52.82 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qLFCLHA.Cleopatra/P.trifoliata.LG3.1QTL--12 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6qLFCLHA.Cleopatra/P.trifoliata.LG8+6QTL--87.83 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qLFCLHA.Cleopatra/P.trifoliata.LG3.2QTL--9 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qBCONC.Cleopatra/P.trifoliata.LG3.LeafQTL--87.16 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r9qCUCONC.Cleopatra/P.trifoliata.LG9.LeafQTL--14.3 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4cqKCONC.Cleopatra/P.trifoliata.LG4c.LeafQTL--11.68 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4bqNACONC.Cleopatra/P.trifoliata.LG4b.LeafQTL--61.46 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4cqPCONC.Cleopatra/P.trifoliata.LG4c.LeafQTL--80.98 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4bqPCONC.Cleopatra/P.trifoliata.LG4b.LeafQTL--110.38 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qSCONC.Cleopatra/P.trifoliata.LG3.LeafQTL--85.16 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7qLFA.Cleopatra/P.trifoliata.LG7.1QTL--43.65 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6qLFA.Cleopatra/P.trifoliata.LG8+6QTL--89.83 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7qLFA.Cleopatra/P.trifoliata.LG7.2QTL--101.29 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7qLFAI.Cleopatra/P.trifoliata.LG7QTL--71.4 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qLFCLB.Cleopatra/P.trifoliata.LG3.1QTL--13 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6qLFCLB.Cleopatra/P.trifoliata.LG8+6QTL--90.83 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qLFCLB.Cleopatra/P.trifoliata.LG3.2QTL--5 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6qLFCLLCL.Cleopatra/P.trifoliata.LG8+6QTL--88.83 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qLFCLLCL.Cleopatra/P.trifoliata.LG3QTL--5 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qH2OCONC.Cleopatra/P.trifoliata.LG3.1.LeafQTL--83.29 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7qH2OCONC.Cleopatra/P.trifoliata.LG7.LeafQTL--80.19 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qH2OCONC.Cleopatra/P.trifoliata.LG3.2.LeafQTL--89.57 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qH2OCONC.Cleopatra/P.trifoliata.LG3.3.LeafQTL--89.57 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qH2OCONC.Cleopatra/P.trifoliata.LG3.4.LeafQTL--89.57 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qH2OCONC.Cleopatra/P.trifoliata.LG3.5.LeafQTL--94.57 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bqBCONC.Cleopatra/P.trifoliata.LG10+5b.RootQTL--10 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bqCRCONC.Cleopatra/P.trifoliata.LG10+5b.RootQTL--160.5 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7qCUCONC.Cleopatra/P.trifoliata.LG7.RootQTL--80.19 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bqFECONC.Cleopatra/P.trifoliata.LG10+5b.RootQTL--167.39 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6qFECONC.Cleopatra/P.trifoliata.LG8+6.RootQTL--19.44 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4bqKCONC.Cleopatra/P.trifoliata.LG4b.RootQTL--57.88 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7qMGCONC.Cleopatra/P.trifoliata.LG7.RootQTL--199.12 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r12qNACONC.Cleopatra/P.trifoliata.LG12.RootQTL--41.01 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bqNICONC.Cleopatra/P.trifoliata.LG10+5b.RootQTL--159.5 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6qNICONC.Cleopatra/P.trifoliata.LG8+6.RootQTL--20.44 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bqSCONC.Cleopatra/P.trifoliata.LG10+5b.RootQTL--0 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6qSRCONC.Cleopatra/P.trifoliata.LG8+6.RootQTL--68.83 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7qSRCONC.Cleopatra/P.trifoliata.LG7.RootQTL--61.91 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bqTICONC.Cleopatra/P.trifoliata.LG10+5b.2.RootQTL--75.85 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7qVCONC.Cleopatra/P.trifoliata.LG7.RootQTL--199.12 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r12qZNCONC.Cleopatra/P.trifoliata.LG12.1.RootQTL--22 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r12qZNCONC.Cleopatra/P.trifoliata.LG12.2.RootQTL--55.79 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qH2OCONC.Cleopatra/P.trifoliata.LG3.1.RootQTL--47.82 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qH2OCONC.Cleopatra/P.trifoliata.LG3.2.RootQTL--55.82 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qRTWT.Cleopatra/P.trifoliata.LG3.1QTL--50.82 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3qRTWT.Cleopatra/P.trifoliata.LG3.2QTL--43.82 cM
Contact
NameDetails
MJ Asins
First name:MJ
Last name:Asins
Title:Researcher
Institution:IVIA
Address:Instituto Valenciano de Investigaciones Agrarias (IVIA), Apartado Oficial, 46113 Moncada (Valencia), Spain
Country:Spain
Email:mjasins@ivia.es
Fax:+34-961390240
Map Loci
This map contains 81 features:
Linkage GroupMarker NameLocus NameTypePosition
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4b6F6R6F6R,700marker_locus0 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4bCR72CR72,260marker_locus25.8 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4bCR3CR3,320marker_locus55.88 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4bC8iC1rtC8iC1rt,280marker_locus60.89 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4bAcuaporAcuapor,750marker_locus61.46 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4b520AR520AR,350marker_locus68.11 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4bATC09ATC09,190marker_locus101.38 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4bCAT01CAT01,140marker_locus119.3 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r93F4R3F4R,250marker_locus0 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r93F4R3F4R,1300marker_locus9.3 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r9COR15COR15,230marker_locus17.86 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r9CR17CR17,250marker_locus19.47 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r94R4R4R4R,1200marker_locus21.72 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r94R4R4R4R,800marker_locus25.01 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r93F3R3F3R,900marker_locus26.45 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r9CMS14CMS14,160marker_locus41.24 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4cCR15CR15,1025marker_locus0 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4cCR28CR28,270marker_locus0.68 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4cCR23CR23,750marker_locus19.53 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4c15R15R,750marker_locus27.4 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4cCR19CR19,370marker_locus80.98 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5b5R4R5R4R,1100marker_locus0 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5b5R4R5R4R,730marker_locus31.26 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5b5F5R5F5R,630marker_locus31.89 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bCR25CR25,400marker_locus31.93 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bTAA41TAA41,160marker_locus33.32 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bCR69CR69,230marker_locus75.85 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bCR24CR24,350marker_locus88.67 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bCR13CR13,550marker_locus103.58 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bCT19CT19,165marker_locus113.81 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bCR63CR63,370marker_locus120.5 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r10+5bCMS46CMS46,190marker_locus167.39 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6HD-ZIPHD-ZIP,510marker_locus0 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+63F4R3F4R,1635marker_locus12.58 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6SOS2SOS2,800marker_locus19.44 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+63F3R3F3R,550marker_locus24.76 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6CMS47CMS47,200marker_locus29.65 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6C2C2,400marker_locus37.51 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+65F4R5F4R,1636marker_locus43.92 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6TAA52TAA52,120marker_locus49.83 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6CR14CR14,290marker_locus102.17 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6CR74CR74,340marker_locus102.19 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r8+6C8C8,510marker_locus103.68 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3CR2CR2,190marker_locus0 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3CL2.26CL2.26,395marker_locus26.82 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3CMS30CMS30,160marker_locus76.26 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3CR80CR80,260marker_locus82.29 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3TAA27TAA27,235marker_locus85.16 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r35F4R5F4R,600marker_locus88.51 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3C2iC1iC2iC1i,470marker_locus89.57 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3CR71CR71,310marker_locus95.12 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3C8iC1rtC8iC1rt,650marker_locus96.14 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r3C1C1,1600marker_locus100.26 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r124R4R4R4R,510marker_locus0 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r126F5R6F5R,1200marker_locus38.01 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r12CMS20CMS20,170marker_locus44.79 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r1242C42C,500marker_locus67.85 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r12CR50CR50,510marker_locus76.6 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4aC1C1,650marker_locus0 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4aC1C1,2900marker_locus0.61 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4a5F5R5F5R,970marker_locus21.81 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r4a5F6R5F6R,1600marker_locus31.81 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7Myc2(HaeIII)Myc2(HaeIII),480marker_locus0 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7CR41CR41,750marker_locus14.22 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7CR20CR20,150marker_locus28.65 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7CL1.35CL1.35,240marker_locus50.91 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7CR18CR18,200marker_locus70.3 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7COR15COR15,340marker_locus71.19 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7CR17CR17,300marker_locus71.4 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7COR15COR15,250marker_locus71.65 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r724R24R,950marker_locus80.19 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7C11iC1rtC11iC1rt,400marker_locus91.77 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r75F5R5F5R,220marker_locus92.57 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r711FrRv11FrRv,520marker_locus94.3 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r76F6R6F6R,2036marker_locus99.29 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7CR76CR76,1400marker_locus107.05 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7C1iC8rtC1iC8rt,515marker_locus118.54 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7CR55CR55,520marker_locus143.62 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7CR21CR21,130marker_locus147.33 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7C8iC2rtC8iC2rt,1018marker_locus166.62 cM
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016.r7CAC23CAC23,230marker_locus199.12 cM
Stock
NameTypeDetails
Cleopatra/P.trifoliatapopulation